RNA–Protein interactions for RNA: ENST00000616352.4

ACACA-238, Transcript of acetyl-CoA carboxylase alpha, human

TSL 1 (best)

Gene ACACA, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACACA-238	ENST00000616352	LCE1A	Q5T7P2	110 aa		8.37	□□□□□ -1.07
ACACA-238	ENST00000616352	SPRR2E	P22531	72 aa		8.34	□□□□□ -1.07
ACACA-238	ENST00000616352	SPRR2B	P35325	72 aa		8.34	□□□□□ -1.07
ACACA-238	ENST00000616352	SPRR2A	P35326	72 aa		8.34	□□□□□ -1.07
ACACA-238	ENST00000616352	KRTAP19-3	Q7Z4W3	81 aa		8.25	□□□□□ -1.09
ACACA-238	ENST00000616352	MT1L	Q93083	61 aa		8.23	□□□□□ -1.09
ACACA-238	ENST00000616352	LCE5A	Q5TCM9	118 aa		8.18	□□□□□ -1.1
ACACA-238	ENST00000616352	PRAC1	Q96KF2	57 aa		8.17	□□□□□ -1.1
ACACA-238	ENST00000616352	MT1G	P13640	62 aa		8.12	□□□□□ -1.11
ACACA-238	ENST00000616352	KRTAP15-1	Q3LI76	137 aa		8.11	□□□□□ -1.11
ACACA-238	ENST00000616352	SPRR2D	P22532	72 aa		8.04	□□□□□ -1.12
ACACA-238	ENST00000616352	MT1M	Q8N339	61 aa		8.02	□□□□□ -1.13
ACACA-238	ENST00000616352	KRTAP19-4	Q3LI73	84 aa		7.95	□□□□□ -1.14
ACACA-238	ENST00000616352	KRTAP4-7	Q9BYR0	210 aa		7.88	□□□□□ -1.15
ACACA-238	ENST00000616352	LCE3C	Q5T5A8	94 aa		7.81	□□□□□ -1.16
ACACA-238	ENST00000616352	KRTAP4-3	Q9BYR4	195 aa		7.81	□□□□□ -1.16
ACACA-238	ENST00000616352	KRTAP2-3	P0C7H8	128 aa		7.81	□□□□□ -1.16
ACACA-238	ENST00000616352	KRTAP20-1	Q3LI63	56 aa		7.81	□□□□□ -1.16
ACACA-238	ENST00000616352	KRTAP2-4	Q9BYR9	128 aa		7.81	□□□□□ -1.16
ACACA-238	ENST00000616352	DST	Q03001	7570 aa	Known RBP	7.8	□□□□□ -1.16
ACACA-238	ENST00000616352	LCE3B	Q5TA77	95 aa		7.78	□□□□□ -1.16
ACACA-238	ENST00000616352	KRTAP2-2	Q9BYT5	123 aa		7.61	□□□□□ -1.19
ACACA-238	ENST00000616352	KRTAP2-1	Q9BYU5	128 aa		7.61	□□□□□ -1.19
ACACA-238	ENST00000616352	LOC100996750	A0A140TA64	210 aa		7.42	□□□□□ -1.22
ACACA-238	ENST00000616352	KRTAP9-6	A8MVA2	160 aa		7.41	□□□□□ -1.22
ACACA-238	ENST00000616352	KRTAP5-5	Q701N2	237 aa	Predicted RBP	7.31	□□□□□ -1.24
ACACA-238	ENST00000616352	SPRR5	A0A1B0GTR4	108 aa		7.3	□□□□□ -1.24
ACACA-238	ENST00000616352	KRTAP5-4	Q6L8H1	288 aa		7.23	□□□□□ -1.25
ACACA-238	ENST00000616352	LCE4A	Q5TA78	99 aa		7.16	□□□□□ -1.26
ACACA-238	ENST00000616352	KRTAP4-9	Q9BYQ8	210 aa		7.05	□□□□□ -1.28
ACACA-238	ENST00000616352	MT1A	P04731	61 aa		7	□□□□□ -1.29
ACACA-238	ENST00000616352	MT4	P47944	62 aa		6.99	□□□□□ -1.29
ACACA-238	ENST00000616352	LCE1D	Q5T752	114 aa		6.98	□□□□□ -1.29
ACACA-238	ENST00000616352		H3BS24	57 aa		6.97	□□□□□ -1.29
ACACA-238	ENST00000616352	SYNE1	Q8NF91	8797 aa	Known RBP	6.97	□□□□□ -1.29
ACACA-238	ENST00000616352	KRTAP6-1	Q3LI64	71 aa		6.94	□□□□□ -1.3
ACACA-238	ENST00000616352	HMCN1	Q96RW7	5635 aa		6.91	□□□□□ -1.3
ACACA-238	ENST00000616352	KRTAP4-6	Q9BYQ5	205 aa		6.9	□□□□□ -1.3
ACACA-238	ENST00000616352	KRTAP12-4	P60329	112 aa		6.87	□□□□□ -1.31
ACACA-238	ENST00000616352	NDUFAF8	A1L188	74 aa		6.8	□□□□□ -1.32
ACACA-238	ENST00000616352	KRTAP20-2	Q3LI61	65 aa		6.75	□□□□□ -1.33
ACACA-238	ENST00000616352	LUZP6	Q538Z0	58 aa		6.71	□□□□□ -1.34
ACACA-238	ENST00000616352	KRTAP9-4	Q9BYQ2	154 aa		6.68	□□□□□ -1.34
ACACA-238	ENST00000616352	KRTAP5-3	Q6L8H2	238 aa		6.54	□□□□□ -1.36
ACACA-238	ENST00000616352	KRTAP6-2	Q3LI66	62 aa		6.47	□□□□□ -1.37
ACACA-238	ENST00000616352	KRTAP5-2	Q701N4	177 aa		6.47	□□□□□ -1.37
ACACA-238	ENST00000616352	AHNAK2	Q8IVF2	5795 aa		6.38	□□□□□ -1.39
ACACA-238	ENST00000616352	MT3	P25713	68 aa		6.35	□□□□□ -1.39
ACACA-238	ENST00000616352		A0A0A0MQY5	61 aa		6.2	□□□□□ -1.42
ACACA-238	ENST00000616352	GPR98	Q8WXG9	6306 aa		6.18	□□□□□ -1.42
ACACA-238	ENST00000616352	KRTAP5-10	Q6L8G5	202 aa		6.12	□□□□□ -1.43
ACACA-238	ENST00000616352	OBSCN	Q5VST9	7968 aa		5.99	□□□□□ -1.45
ACACA-238	ENST00000616352	KRTAP4-11	Q9BYQ6	195 aa		5.98	□□□□□ -1.45
ACACA-238	ENST00000616352	LCE3D	Q9BYE3	92 aa		5.77	□□□□□ -1.48
ACACA-238	ENST00000616352	KRTAP5-8	O75690	187 aa		5.77	□□□□□ -1.49
ACACA-238	ENST00000616352	KRTAP5-7	Q6L8G8	165 aa		5.76	□□□□□ -1.49
ACACA-238	ENST00000616352	INE1	O15225	51 aa		5.7	□□□□□ -1.5
ACACA-238	ENST00000616352	LCE1E	Q5T753	118 aa		5.67	□□□□□ -1.5
ACACA-238	ENST00000616352	KRTAP5-1	Q6L8H4	278 aa		5.66	□□□□□ -1.5
ACACA-238	ENST00000616352	LCE3E	Q5T5B0	92 aa		5.56	□□□□□ -1.52
ACACA-238	ENST00000616352	MUC5AC	P98088	5654 aa		5.53	□□□□□ -1.52
ACACA-238	ENST00000616352	KRTAP4-2	Q9BYR5	136 aa		5.31	□□□□□ -1.56
ACACA-238	ENST00000616352	KRTAP9-9	Q9BYP9	154 aa		5.29	□□□□□ -1.56
ACACA-238	ENST00000616352	LCE1C	Q5T751	118 aa		5.27	□□□□□ -1.57
ACACA-238	ENST00000616352	LCE1B	Q5T7P3	118 aa		5.27	□□□□□ -1.57
ACACA-238	ENST00000616352	MUC5B	Q9HC84	5762 aa	Predicted RBP	5.15	□□□□□ -1.58
ACACA-238	ENST00000616352	AHNAK	Q09666	5890 aa	Known RBP	5	□□□□□ -1.61
ACACA-238	ENST00000616352	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.9	□□□□□ -1.62
ACACA-238	ENST00000616352	KRTAP5-11	Q6L8G4	156 aa		4.71	□□□□□ -1.66
ACACA-238	ENST00000616352	PRM1	P04553	51 aa		4.61	□□□□□ -1.67
ACACA-238	ENST00000616352	KRTAP21-2	Q3LI59	83 aa		4.57	□□□□□ -1.68
ACACA-238	ENST00000616352	KRTAP4-12	Q9BQ66	201 aa		4.5	□□□□□ -1.69
ACACA-238	ENST00000616352	LCE1F	Q5T754	118 aa		4.38	□□□□□ -1.71
ACACA-238	ENST00000616352	KRTAP4-4	Q9BYR3	166 aa		4.05	□□□□□ -1.76
ACACA-238	ENST00000616352	PHGR1	C9JFL3	82 aa		4.04	□□□□□ -1.76
ACACA-238	ENST00000616352	MUC19	Q7Z5P9	8384 aa		3.65	□□□□□ -1.83
ACACA-238	ENST00000616352	KRTAP21-1	Q3LI58	79 aa		2.73	□□□□□ -1.97
ACACA-238	ENST00000616352	MUC16	Q8WXI7	14507 aa		2.58	□□□□□ -2

Retrieved 78 of 20,778 RNA–protein pairs in 434.3 ms