RNA–Protein interactions for RNA: ENST00000615631.4

FDFT1-223, Transcript of farnesyl-diphosphate farnesyltransferase 1, human

APPRIS P1 TSL 5 BASIC

Gene FDFT1, Length 2,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDFT1-223	ENST00000615631	KRTAP19-7	Q3SYF9	63 aa		5.33	□□□□□ -1.56
FDFT1-223	ENST00000615631	KRTAP19-5	Q3LI72	72 aa		5.31	□□□□□ -1.56
FDFT1-223	ENST00000615631	MUC12	Q9UKN1	5478 aa		5.28	□□□□□ -1.56
FDFT1-223	ENST00000615631	MT1E	P04732	61 aa		5.26	□□□□□ -1.57
FDFT1-223	ENST00000615631	SPRR2E	P22531	72 aa		5.23	□□□□□ -1.57
FDFT1-223	ENST00000615631	SPRR2B	P35325	72 aa		5.23	□□□□□ -1.57
FDFT1-223	ENST00000615631	SPRR2A	P35326	72 aa		5.23	□□□□□ -1.57
FDFT1-223	ENST00000615631	KRTAP12-3	P60328	96 aa		5.22	□□□□□ -1.57
FDFT1-223	ENST00000615631	LCE1A	Q5T7P2	110 aa		5.21	□□□□□ -1.57
FDFT1-223	ENST00000615631	NEB	P20929	6669 aa		5.2	□□□□□ -1.58
FDFT1-223	ENST00000615631	MDN1	Q9NU22	5596 aa		5.19	□□□□□ -1.58
FDFT1-223	ENST00000615631	KRTAP19-3	Q7Z4W3	81 aa		5.14	□□□□□ -1.59
FDFT1-223	ENST00000615631	MT1L	Q93083	61 aa		5.1	□□□□□ -1.59
FDFT1-223	ENST00000615631	LCE5A	Q5TCM9	118 aa		5.09	□□□□□ -1.59
FDFT1-223	ENST00000615631	MT1G	P13640	62 aa		5.07	□□□□□ -1.6
FDFT1-223	ENST00000615631	SPRR2D	P22532	72 aa		5.05	□□□□□ -1.6
FDFT1-223	ENST00000615631	KRTAP2-3	P0C7H8	128 aa		5.04	□□□□□ -1.6
FDFT1-223	ENST00000615631	KRTAP2-4	Q9BYR9	128 aa		5.04	□□□□□ -1.6
FDFT1-223	ENST00000615631	KRTAP2-1	Q9BYU5	128 aa		5.04	□□□□□ -1.6
FDFT1-223	ENST00000615631	MT1M	Q8N339	61 aa		4.98	□□□□□ -1.61
FDFT1-223	ENST00000615631	KRTAP19-4	Q3LI73	84 aa		4.97	□□□□□ -1.61
FDFT1-223	ENST00000615631	KRTAP20-1	Q3LI63	56 aa		4.92	□□□□□ -1.62
FDFT1-223	ENST00000615631	LCE3C	Q5T5A8	94 aa		4.91	□□□□□ -1.62
FDFT1-223	ENST00000615631	LCE3B	Q5TA77	95 aa		4.88	□□□□□ -1.63
FDFT1-223	ENST00000615631	KRTAP4-7	Q9BYR0	210 aa		4.86	□□□□□ -1.63
FDFT1-223	ENST00000615631	KRTAP4-3	Q9BYR4	195 aa		4.83	□□□□□ -1.64
FDFT1-223	ENST00000615631	DST	Q03001	7570 aa	Known RBP	4.83	□□□□□ -1.64
FDFT1-223	ENST00000615631	KRTAP9-6	A8MVA2	160 aa		4.81	□□□□□ -1.64
FDFT1-223	ENST00000615631	KRTAP2-2	Q9BYT5	123 aa		4.8	□□□□□ -1.64
FDFT1-223	ENST00000615631	KRTAP12-4	P60329	112 aa		4.69	□□□□□ -1.66
FDFT1-223	ENST00000615631	LOC100996750	A0A140TA64	210 aa		4.59	□□□□□ -1.67
FDFT1-223	ENST00000615631	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.52	□□□□□ -1.69
FDFT1-223	ENST00000615631	LCE4A	Q5TA78	99 aa		4.49	□□□□□ -1.69
FDFT1-223	ENST00000615631	KRTAP5-4	Q6L8H1	288 aa		4.49	□□□□□ -1.69
FDFT1-223	ENST00000615631	KRTAP4-9	Q9BYQ8	210 aa		4.4	□□□□□ -1.7
FDFT1-223	ENST00000615631	MT4	P47944	62 aa		4.38	□□□□□ -1.71
FDFT1-223	ENST00000615631	LCE1D	Q5T752	114 aa		4.37	□□□□□ -1.71
FDFT1-223	ENST00000615631	MT1A	P04731	61 aa		4.35	□□□□□ -1.71
FDFT1-223	ENST00000615631	LCE1E	Q5T753	118 aa		4.34	□□□□□ -1.71
FDFT1-223	ENST00000615631	KRTAP4-6	Q9BYQ5	205 aa		4.3	□□□□□ -1.72
FDFT1-223	ENST00000615631	KRTAP6-1	Q3LI64	71 aa		4.29	□□□□□ -1.72
FDFT1-223	ENST00000615631	PRM1	P04553	51 aa		4.28	□□□□□ -1.72
FDFT1-223	ENST00000615631	SYNE1	Q8NF91	8797 aa	Known RBP	4.25	□□□□□ -1.73
FDFT1-223	ENST00000615631	HMCN1	Q96RW7	5635 aa		4.24	□□□□□ -1.73
FDFT1-223	ENST00000615631	KRTAP20-2	Q3LI61	65 aa		4.21	□□□□□ -1.74
FDFT1-223	ENST00000615631	KRTAP9-4	Q9BYQ2	154 aa		4.16	□□□□□ -1.74
FDFT1-223	ENST00000615631	KRTAP5-3	Q6L8H2	238 aa		4.06	□□□□□ -1.76
FDFT1-223	ENST00000615631	KRTAP6-2	Q3LI66	62 aa		4.02	□□□□□ -1.77
FDFT1-223	ENST00000615631	KRTAP5-2	Q701N4	177 aa		4.01	□□□□□ -1.77
FDFT1-223	ENST00000615631	LCE3E	Q5T5B0	92 aa		4	□□□□□ -1.77
FDFT1-223	ENST00000615631	MT3	P25713	68 aa		3.97	□□□□□ -1.77
FDFT1-223	ENST00000615631	LCE3D	Q9BYE3	92 aa		3.96	□□□□□ -1.78
FDFT1-223	ENST00000615631	LCE1F	Q5T754	118 aa		3.94	□□□□□ -1.78
FDFT1-223	ENST00000615631	AHNAK2	Q8IVF2	5795 aa		3.89	□□□□□ -1.79
FDFT1-223	ENST00000615631	KRTAP5-10	Q6L8G5	202 aa		3.83	□□□□□ -1.8
FDFT1-223	ENST00000615631	GPR98	Q8WXG9	6306 aa		3.81	□□□□□ -1.8
FDFT1-223	ENST00000615631	KRTAP4-11	Q9BYQ6	195 aa		3.73	□□□□□ -1.81
FDFT1-223	ENST00000615631	OBSCN	Q5VST9	7968 aa		3.68	□□□□□ -1.82
FDFT1-223	ENST00000615631	KRTAP5-7	Q6L8G8	165 aa		3.62	□□□□□ -1.83
FDFT1-223	ENST00000615631	KRTAP5-8	O75690	187 aa		3.6	□□□□□ -1.83
FDFT1-223	ENST00000615631	KRTAP5-1	Q6L8H4	278 aa		3.51	□□□□□ -1.85
FDFT1-223	ENST00000615631	KRTAP9-9	Q9BYP9	154 aa		3.34	□□□□□ -1.88
FDFT1-223	ENST00000615631	MUC5AC	P98088	5654 aa		3.33	□□□□□ -1.88
FDFT1-223	ENST00000615631	LCE1C	Q5T751	118 aa		3.29	□□□□□ -1.88
FDFT1-223	ENST00000615631	LCE1B	Q5T7P3	118 aa		3.29	□□□□□ -1.88
FDFT1-223	ENST00000615631	KRTAP4-2	Q9BYR5	136 aa		3.29	□□□□□ -1.88
FDFT1-223	ENST00000615631	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.13	□□□□□ -1.91
FDFT1-223	ENST00000615631	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.04	□□□□□ -1.92
FDFT1-223	ENST00000615631	AHNAK	Q09666	5890 aa	Known RBP	3.04	□□□□□ -1.92
FDFT1-223	ENST00000615631	MUC19	Q7Z5P9	8384 aa		3	□□□□□ -1.93
FDFT1-223	ENST00000615631	KRTAP5-11	Q6L8G4	156 aa		2.93	□□□□□ -1.94
FDFT1-223	ENST00000615631	KRTAP21-2	Q3LI59	83 aa		2.82	□□□□□ -1.96
FDFT1-223	ENST00000615631	KRTAP21-1	Q3LI58	79 aa		2.82	□□□□□ -1.96
FDFT1-223	ENST00000615631	KRTAP4-12	Q9BQ66	201 aa		2.8	□□□□□ -1.96
FDFT1-223	ENST00000615631	PHGR1	C9JFL3	82 aa		2.52	□□□□□ -2.01
FDFT1-223	ENST00000615631	KRTAP4-4	Q9BYR3	166 aa		2.51	□□□□□ -2.01
FDFT1-223	ENST00000615631	MUC16	Q8WXI7	14507 aa		1.58	□□□□□ -2.16

Retrieved 77 of 20,778 RNA–protein pairs in 12.2 ms