RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 LCE3CQ5T5A8 94 aa4.66□□□□□ -1.66
FOXN3-219ENST00000615335 KRTAP2-3P0C7H8 128 aa4.64□□□□□ -1.67
FOXN3-219ENST00000615335 KRTAP2-4Q9BYR9 128 aa4.64□□□□□ -1.67
FOXN3-219ENST00000615335 KRTAP2-1Q9BYU5 128 aa4.64□□□□□ -1.67
FOXN3-219ENST00000615335 KRTAP6-3Q3LI67 103 aa4.64□□□□□ -1.67
FOXN3-219ENST00000615335 KRTAP5-9P26371 169 aa4.63□□□□□ -1.67
FOXN3-219ENST00000615335 MUC12Q9UKN1 5478 aa4.63□□□□□ -1.67
FOXN3-219ENST00000615335 KRTAP9-7A8MTY7 169 aa4.61□□□□□ -1.67
FOXN3-219ENST00000615335 MT1EP04732 61 aa4.6□□□□□ -1.67
FOXN3-219ENST00000615335 MDN1Q9NU22 5596 aa4.55□□□□□ -1.68
FOXN3-219ENST00000615335 MT1LQ93083 61 aa4.48□□□□□ -1.69
FOXN3-219ENST00000615335 SPRR2EP22531 72 aa4.47□□□□□ -1.69
FOXN3-219ENST00000615335 SPRR2BP35325 72 aa4.47□□□□□ -1.69
FOXN3-219ENST00000615335 SPRR2AP35326 72 aa4.47□□□□□ -1.69
FOXN3-219ENST00000615335 KRTAP9-6A8MVA2 160 aa4.46□□□□□ -1.69
FOXN3-219ENST00000615335 LCE1AQ5T7P2 110 aa4.46□□□□□ -1.69
FOXN3-219ENST00000615335 KRTAP19-3Q7Z4W3 81 aa4.46□□□□□ -1.69
FOXN3-219ENST00000615335 KRTAP19-4Q3LI73 84 aa4.42□□□□□ -1.7
FOXN3-219ENST00000615335 MT1GP13640 62 aa4.41□□□□□ -1.7
FOXN3-219ENST00000615335 KRTAP4-7Q9BYR0 210 aa4.41□□□□□ -1.7
FOXN3-219ENST00000615335 LCE5AQ5TCM9 118 aa4.4□□□□□ -1.7
FOXN3-219ENST00000615335 NEBP20929 6669 aa4.39□□□□□ -1.71
FOXN3-219ENST00000615335 MT1MQ8N339 61 aa4.35□□□□□ -1.71
FOXN3-219ENST00000615335 SPRR2DP22532 72 aa4.31□□□□□ -1.72
FOXN3-219ENST00000615335 DSTQ03001 7570 aaKnown RBP4.28□□□□□ -1.72
FOXN3-219ENST00000615335 KRTAP4-3Q9BYR4 195 aa4.27□□□□□ -1.73
FOXN3-219ENST00000615335 KRTAP12-4P60329 112 aa4.22□□□□□ -1.73
FOXN3-219ENST00000615335 LCE3BQ5TA77 95 aa4.15□□□□□ -1.74
FOXN3-219ENST00000615335 LOC100996750A0A140TA64 210 aa4.11□□□□□ -1.75
FOXN3-219ENST00000615335 KRTAP20-1Q3LI63 56 aa4.08□□□□□ -1.76
FOXN3-219ENST00000615335 KRTAP4-6Q9BYQ5 205 aa4□□□□□ -1.77
FOXN3-219ENST00000615335 KRTAP2-2Q9BYT5 123 aa4□□□□□ -1.77
FOXN3-219ENST00000615335 KRTAP5-5Q701N2 237 aaPredicted RBP3.92□□□□□ -1.78
FOXN3-219ENST00000615335 KRTAP5-4Q6L8H1 288 aa3.82□□□□□ -1.8
FOXN3-219ENST00000615335 PRM1P04553 51 aa3.81□□□□□ -1.8
FOXN3-219ENST00000615335 MT1AP04731 61 aa3.81□□□□□ -1.8
FOXN3-219ENST00000615335 LCE4AQ5TA78 99 aa3.8□□□□□ -1.8
FOXN3-219ENST00000615335 KRTAP6-1Q3LI64 71 aa3.79□□□□□ -1.8
FOXN3-219ENST00000615335 KRTAP4-9Q9BYQ8 210 aa3.77□□□□□ -1.81
FOXN3-219ENST00000615335 MT4P47944 62 aa3.76□□□□□ -1.81
FOXN3-219ENST00000615335 SYNE1Q8NF91 8797 aaKnown RBP3.75□□□□□ -1.81
FOXN3-219ENST00000615335 LCE3EQ5T5B0 92 aa3.72□□□□□ -1.81
FOXN3-219ENST00000615335 LCE1DQ5T752 114 aa3.7□□□□□ -1.82
FOXN3-219ENST00000615335 KRTAP4-12Q9BQ66 201 aa3.7□□□□□ -1.82
FOXN3-219ENST00000615335 LCE3DQ9BYE3 92 aa3.69□□□□□ -1.82
FOXN3-219ENST00000615335 HMCN1Q96RW7 5635 aa3.67□□□□□ -1.82
FOXN3-219ENST00000615335 KRTAP9-4Q9BYQ2 154 aa3.64□□□□□ -1.83
FOXN3-219ENST00000615335 KRTAP20-2Q3LI61 65 aa3.6□□□□□ -1.83
FOXN3-219ENST00000615335 KRTAP6-2Q3LI66 62 aa3.53□□□□□ -1.84
FOXN3-219ENST00000615335 KRTAP9-9Q9BYP9 154 aa3.51□□□□□ -1.85
FOXN3-219ENST00000615335 KRTAP5-3Q6L8H2 238 aa3.5□□□□□ -1.85
FOXN3-219ENST00000615335 MT3P25713 68 aa3.48□□□□□ -1.85
FOXN3-219ENST00000615335 LCE1EQ5T753 118 aa3.44□□□□□ -1.86
FOXN3-219ENST00000615335 KRTAP5-2Q701N4 177 aa3.43□□□□□ -1.86
FOXN3-219ENST00000615335 OBSCNQ5VST9 7968 aa3.34□□□□□ -1.87
FOXN3-219ENST00000615335 AHNAK2Q8IVF2 5795 aa3.29□□□□□ -1.88
FOXN3-219ENST00000615335 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
FOXN3-219ENST00000615335 KRTAP4-11Q9BYQ6 195 aa3.17□□□□□ -1.9
FOXN3-219ENST00000615335 KRTAP5-10Q6L8G5 202 aa3.15□□□□□ -1.9
FOXN3-219ENST00000615335 KRTAP4-2Q9BYR5 136 aa3.13□□□□□ -1.91
FOXN3-219ENST00000615335 GPR98Q8WXG9 6306 aa3.11□□□□□ -1.91
FOXN3-219ENST00000615335 KRTAP5-8O75690 187 aa3.04□□□□□ -1.92
FOXN3-219ENST00000615335 KRTAP5-1Q6L8H4 278 aa3□□□□□ -1.93
FOXN3-219ENST00000615335 KRTAP5-7Q6L8G8 165 aa2.94□□□□□ -1.94
FOXN3-219ENST00000615335 MUC5ACP98088 5654 aa2.92□□□□□ -1.94
FOXN3-219ENST00000615335 LCE1BQ5T7P3 118 aa2.89□□□□□ -1.95
FOXN3-219ENST00000615335 LCE1CQ5T751 118 aa2.83□□□□□ -1.96
FOXN3-219ENST00000615335 MUC5BQ9HC84 5762 aaPredicted RBP2.68□□□□□ -1.98
FOXN3-219ENST00000615335 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.62□□□□□ -1.99
FOXN3-219ENST00000615335 AHNAKQ09666 5890 aaKnown RBP2.53□□□□□ -2
FOXN3-219ENST00000615335 KRTAP21-1Q3LI58 79 aa2.51□□□□□ -2.01
FOXN3-219ENST00000615335 KRTAP5-11Q6L8G4 156 aa2.51□□□□□ -2.01
FOXN3-219ENST00000615335 KRTAP21-2Q3LI59 83 aa2.48□□□□□ -2.01
FOXN3-219ENST00000615335 MUC19Q7Z5P9 8384 aa2.35□□□□□ -2.03
FOXN3-219ENST00000615335 KRTAP4-4Q9BYR3 166 aa2.25□□□□□ -2.05
FOXN3-219ENST00000615335 PHGR1C9JFL3 82 aa2.17□□□□□ -2.06
FOXN3-219ENST00000615335 MUC16Q8WXI7 14507 aa1.35□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 10.7 ms