RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 LCE3AQ5TA76 89 aa6.17□□□□□ -1.42
SMN2-213ENST00000614240 AHNAK2Q8IVF2 5795 aa6.17□□□□□ -1.42
SMN2-213ENST00000614240 SMIM26A0A096LP01 95 aa6.14□□□□□ -1.43
SMN2-213ENST00000614240 TNP1P09430 55 aa6.13□□□□□ -1.43
SMN2-213ENST00000614240 A8MU10 97 aa6.07□□□□□ -1.44
SMN2-213ENST00000614240 A0A1B0GU69 56 aa6.06□□□□□ -1.44
SMN2-213ENST00000614240 KRTAP4-7Q9BYR0 210 aa6.05□□□□□ -1.44
SMN2-213ENST00000614240 KRTAP5-7Q6L8G8 165 aa6.01□□□□□ -1.45
SMN2-213ENST00000614240 KRTAP5-3Q6L8H2 238 aa6.01□□□□□ -1.45
SMN2-213ENST00000614240 COX7CP15954 63 aa5.96□□□□□ -1.46
SMN2-213ENST00000614240 H7BZZ5 65 aa5.94□□□□□ -1.46
SMN2-213ENST00000614240 KRTAP12-3P60328 96 aa5.94□□□□□ -1.46
SMN2-213ENST00000614240 KRTAP20-2Q3LI61 65 aa5.92□□□□□ -1.46
SMN2-213ENST00000614240 SPRR5A0A1B0GTR4 108 aa5.86□□□□□ -1.47
SMN2-213ENST00000614240 KRTAP12-4P60329 112 aa5.85□□□□□ -1.47
SMN2-213ENST00000614240 KRTAP5-5Q701N2 237 aaPredicted RBP5.82□□□□□ -1.48
SMN2-213ENST00000614240 PRR15LQ9BU68 103 aa5.8□□□□□ -1.48
SMN2-213ENST00000614240 KRTAP4-2Q9BYR5 136 aa5.78□□□□□ -1.48
SMN2-213ENST00000614240 KRTAP4-11Q9BYQ6 195 aa5.77□□□□□ -1.49
SMN2-213ENST00000614240 KRTAP25-1Q3LHN0 102 aa5.61□□□□□ -1.51
SMN2-213ENST00000614240 LINC01558Q9Y6Z2 57 aa5.6□□□□□ -1.51
SMN2-213ENST00000614240 ANAPC13Q9BS18 74 aa5.59□□□□□ -1.51
SMN2-213ENST00000614240 UQCR11O14957 56 aa5.57□□□□□ -1.52
SMN2-213ENST00000614240 SYNE1Q8NF91 8797 aaKnown RBP5.54□□□□□ -1.52
SMN2-213ENST00000614240 ATP5EP56381 51 aaPredicted RBP5.53□□□□□ -1.52
SMN2-213ENST00000614240 KRTAP23-1A1A580 65 aa5.48□□□□□ -1.53
SMN2-213ENST00000614240 CCDC179H3BU77 68 aa5.47□□□□□ -1.53
SMN2-213ENST00000614240 KRTAP15-1Q3LI76 137 aa5.45□□□□□ -1.54
SMN2-213ENST00000614240 LCE3CQ5T5A8 94 aa5.44□□□□□ -1.54
SMN2-213ENST00000614240 K7ERS5 55 aa5.43□□□□□ -1.54
SMN2-213ENST00000614240 MIR22HGQ0VDD5 57 aa5.42□□□□□ -1.54
SMN2-213ENST00000614240 KRTAP5-2Q701N4 177 aa5.38□□□□□ -1.55
SMN2-213ENST00000614240 MT1AP04731 61 aa5.37□□□□□ -1.55
SMN2-213ENST00000614240 KRTAP6-1Q3LI64 71 aa5.36□□□□□ -1.55
SMN2-213ENST00000614240 KRTAP5-8O75690 187 aa5.29□□□□□ -1.56
SMN2-213ENST00000614240 TMEM258P61165 79 aa5.24□□□□□ -1.57
SMN2-213ENST00000614240 SVIPQ8NHG7 77 aa5.24□□□□□ -1.57
SMN2-213ENST00000614240 KRTAP6-2Q3LI66 62 aa5.2□□□□□ -1.58
SMN2-213ENST00000614240 AHNAKQ09666 5890 aaKnown RBP5.2□□□□□ -1.58
SMN2-213ENST00000614240 MUC5ACP98088 5654 aa5.19□□□□□ -1.58
SMN2-213ENST00000614240 PSPHP1O15172 72 aa5.13□□□□□ -1.59
SMN2-213ENST00000614240 MUC5BQ9HC84 5762 aaPredicted RBP5.1□□□□□ -1.59
SMN2-213ENST00000614240 KRTAP9-6A8MVA2 160 aa5.09□□□□□ -1.59
SMN2-213ENST00000614240 RPS28P62857 69 aaKnown RBP5.08□□□□□ -1.6
SMN2-213ENST00000614240 V9GYY9 64 aa5.07□□□□□ -1.6
SMN2-213ENST00000614240 CDC42SE1Q9NRR8 79 aa5.06□□□□□ -1.6
SMN2-213ENST00000614240 OBSCNQ5VST9 7968 aa5.06□□□□□ -1.6
SMN2-213ENST00000614240 Q1T7F1 81 aa5.03□□□□□ -1.6
SMN2-213ENST00000614240 A6NED7 52 aa4.95□□□□□ -1.62
SMN2-213ENST00000614240 MT3P25713 68 aa4.95□□□□□ -1.62
SMN2-213ENST00000614240 ROMO1P60602 79 aa4.94□□□□□ -1.62
SMN2-213ENST00000614240 KRTAP5-1Q6L8H4 278 aa4.9□□□□□ -1.63
SMN2-213ENST00000614240 PCP4P48539 62 aa4.75□□□□□ -1.65
SMN2-213ENST00000614240 LCE1EQ5T753 118 aa4.59□□□□□ -1.67
SMN2-213ENST00000614240 A0A0A0MQY5 61 aa4.45□□□□□ -1.7
SMN2-213ENST00000614240 LCE1BQ5T7P3 118 aa4.42□□□□□ -1.7
SMN2-213ENST00000614240 LCE1CQ5T751 118 aa4.26□□□□□ -1.73
SMN2-213ENST00000614240 KRTAP5-11Q6L8G4 156 aa3.89□□□□□ -1.79
SMN2-213ENST00000614240 LCE3DQ9BYE3 92 aa3.86□□□□□ -1.79
SMN2-213ENST00000614240 LCE1FQ5T754 118 aa3.85□□□□□ -1.79
SMN2-213ENST00000614240 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.85□□□□□ -1.79
SMN2-213ENST00000614240 BRK1Q8WUW1 75 aa3.82□□□□□ -1.8
SMN2-213ENST00000614240 PHGR1C9JFL3 82 aa3.67□□□□□ -1.82
SMN2-213ENST00000614240 PRAC1Q96KF2 57 aa3.67□□□□□ -1.82
SMN2-213ENST00000614240 LCE3EQ5T5B0 92 aa3.59□□□□□ -1.83
SMN2-213ENST00000614240 NDUFAF8A1L188 74 aa3.57□□□□□ -1.84
SMN2-213ENST00000614240 PMAIP1Q13794 54 aa3.57□□□□□ -1.84
SMN2-213ENST00000614240 KRTAP21-2Q3LI59 83 aa3.51□□□□□ -1.85
SMN2-213ENST00000614240 KRTAP4-4Q9BYR3 166 aa3.32□□□□□ -1.88
SMN2-213ENST00000614240 MUC19Q7Z5P9 8384 aa3.11□□□□□ -1.91
SMN2-213ENST00000614240 LUZP6Q538Z0 58 aa3.11□□□□□ -1.91
SMN2-213ENST00000614240 PRO0628Q9UI54 55 aa2.99□□□□□ -1.93
SMN2-213ENST00000614240 KTN1-AS1Q86SY8 53 aa2.97□□□□□ -1.93
SMN2-213ENST00000614240 KRTAP21-1Q3LI58 79 aa2.79□□□□□ -1.96
SMN2-213ENST00000614240 PRM1P04553 51 aa2.5□□□□□ -2.01
SMN2-213ENST00000614240 MUC16Q8WXI7 14507 aa2.23□□□□□ -2.05
SMN2-213ENST00000614240 INE1O15225 51 aa1.57□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 104.5 ms