RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 MDN1Q9NU22 5596 aa3.64□□□□□ -1.83
GGA3-221ENST00000614198 KRTAP19-7Q3SYF9 63 aa3.62□□□□□ -1.83
GGA3-221ENST00000614198 SYNE1Q8NF91 8797 aaKnown RBP3.61□□□□□ -1.83
GGA3-221ENST00000614198 KRTAP4-7Q9BYR0 210 aa3.58□□□□□ -1.84
GGA3-221ENST00000614198 LCE3CQ5T5A8 94 aa3.54□□□□□ -1.84
GGA3-221ENST00000614198 MT1EP04732 61 aa3.52□□□□□ -1.85
GGA3-221ENST00000614198 SPRR2FQ96RM1 72 aa3.51□□□□□ -1.85
GGA3-221ENST00000614198 KRTAP9-6A0A140TA67 174 aa3.5□□□□□ -1.85
GGA3-221ENST00000614198 KRTAP2-3P0C7H8 128 aa3.48□□□□□ -1.85
GGA3-221ENST00000614198 KRTAP2-4Q9BYR9 128 aa3.48□□□□□ -1.85
GGA3-221ENST00000614198 KRTAP2-1Q9BYU5 128 aa3.48□□□□□ -1.85
GGA3-221ENST00000614198 KRTAP4-3Q9BYR4 195 aa3.47□□□□□ -1.85
GGA3-221ENST00000614198 MT1LQ93083 61 aa3.46□□□□□ -1.86
GGA3-221ENST00000614198 KRTAP9-6A8MVA2 160 aa3.45□□□□□ -1.86
GGA3-221ENST00000614198 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.43□□□□□ -1.86
GGA3-221ENST00000614198 LOC100996750A0A140TA64 210 aa3.35□□□□□ -1.87
GGA3-221ENST00000614198 KRTAP19-3Q7Z4W3 81 aa3.35□□□□□ -1.87
GGA3-221ENST00000614198 KRTAP5-9P26371 169 aa3.32□□□□□ -1.88
GGA3-221ENST00000614198 MT1MQ8N339 61 aa3.32□□□□□ -1.88
GGA3-221ENST00000614198 LCE1AQ5T7P2 110 aa3.31□□□□□ -1.88
GGA3-221ENST00000614198 LCE5AQ5TCM9 118 aa3.3□□□□□ -1.88
GGA3-221ENST00000614198 SPRR2EP22531 72 aa3.29□□□□□ -1.88
GGA3-221ENST00000614198 SPRR2BP35325 72 aa3.29□□□□□ -1.88
GGA3-221ENST00000614198 SPRR2AP35326 72 aa3.29□□□□□ -1.88
GGA3-221ENST00000614198 MT1GP13640 62 aa3.29□□□□□ -1.88
GGA3-221ENST00000614198 KRTAP19-4Q3LI73 84 aa3.25□□□□□ -1.89
GGA3-221ENST00000614198 KRTAP9-7A8MTY7 169 aa3.23□□□□□ -1.89
GGA3-221ENST00000614198 KRTAP6-3Q3LI67 103 aa3.23□□□□□ -1.89
GGA3-221ENST00000614198 KRTAP12-4P60329 112 aa3.21□□□□□ -1.9
GGA3-221ENST00000614198 NEBP20929 6669 aa3.19□□□□□ -1.9
GGA3-221ENST00000614198 SPRR2DP22532 72 aa3.15□□□□□ -1.91
GGA3-221ENST00000614198 LCE3BQ5TA77 95 aa3.03□□□□□ -1.92
GGA3-221ENST00000614198 KRTAP4-9Q9BYQ8 210 aa3□□□□□ -1.93
GGA3-221ENST00000614198 KRTAP6-1Q3LI64 71 aa2.99□□□□□ -1.93
GGA3-221ENST00000614198 KRTAP5-5Q701N2 237 aaPredicted RBP2.96□□□□□ -1.94
GGA3-221ENST00000614198 PRM1P04553 51 aa2.92□□□□□ -1.94
GGA3-221ENST00000614198 MT4P47944 62 aa2.86□□□□□ -1.95
GGA3-221ENST00000614198 MT1AP04731 61 aa2.86□□□□□ -1.95
GGA3-221ENST00000614198 LCE3DQ9BYE3 92 aa2.84□□□□□ -1.95
GGA3-221ENST00000614198 KRTAP4-6Q9BYQ5 205 aa2.84□□□□□ -1.95
GGA3-221ENST00000614198 HMCN1Q96RW7 5635 aa2.83□□□□□ -1.96
GGA3-221ENST00000614198 KRTAP20-1Q3LI63 56 aa2.81□□□□□ -1.96
GGA3-221ENST00000614198 LCE3EQ5T5B0 92 aa2.8□□□□□ -1.96
GGA3-221ENST00000614198 LCE1EQ5T753 118 aa2.8□□□□□ -1.96
GGA3-221ENST00000614198 KRTAP2-2Q9BYT5 123 aa2.78□□□□□ -1.96
GGA3-221ENST00000614198 KRTAP5-4Q6L8H1 288 aa2.77□□□□□ -1.97
GGA3-221ENST00000614198 KRTAP6-2Q3LI66 62 aa2.75□□□□□ -1.97
GGA3-221ENST00000614198 KRTAP9-4Q9BYQ2 154 aa2.75□□□□□ -1.97
GGA3-221ENST00000614198 LCE1DQ5T752 114 aa2.74□□□□□ -1.97
GGA3-221ENST00000614198 KRTAP20-2Q3LI61 65 aa2.66□□□□□ -1.98
GGA3-221ENST00000614198 LCE4AQ5TA78 99 aa2.64□□□□□ -1.99
GGA3-221ENST00000614198 MUC19Q7Z5P9 8384 aa2.58□□□□□ -2
GGA3-221ENST00000614198 MT3P25713 68 aa2.58□□□□□ -2
GGA3-221ENST00000614198 KRTAP5-3Q6L8H2 238 aa2.54□□□□□ -2
GGA3-221ENST00000614198 KRTAP5-2Q701N4 177 aa2.51□□□□□ -2.01
GGA3-221ENST00000614198 KRTAP9-9Q9BYP9 154 aa2.39□□□□□ -2.03
GGA3-221ENST00000614198 AHNAK2Q8IVF2 5795 aa2.38□□□□□ -2.03
GGA3-221ENST00000614198 LCE1FQ5T754 118 aa2.35□□□□□ -2.03
GGA3-221ENST00000614198 LCE1BQ5T7P3 118 aa2.3□□□□□ -2.04
GGA3-221ENST00000614198 KRTAP4-11Q9BYQ6 195 aa2.3□□□□□ -2.04
GGA3-221ENST00000614198 KRTAP4-12Q9BQ66 201 aa2.3□□□□□ -2.04
GGA3-221ENST00000614198 MUC5ACP98088 5654 aa2.29□□□□□ -2.04
GGA3-221ENST00000614198 GPR98Q8WXG9 6306 aa2.25□□□□□ -2.05
GGA3-221ENST00000614198 KRTAP5-1Q6L8H4 278 aa2.24□□□□□ -2.05
GGA3-221ENST00000614198 KRTAP5-8O75690 187 aa2.22□□□□□ -2.05
GGA3-221ENST00000614198 KRTAP5-10Q6L8G5 202 aa2.2□□□□□ -2.06
GGA3-221ENST00000614198 MUC5BQ9HC84 5762 aaPredicted RBP2.18□□□□□ -2.06
GGA3-221ENST00000614198 KRTAP4-2Q9BYR5 136 aa2.15□□□□□ -2.06
GGA3-221ENST00000614198 LCE1CQ5T751 118 aa2.07□□□□□ -2.08
GGA3-221ENST00000614198 KRTAP5-7Q6L8G8 165 aa2.03□□□□□ -2.08
GGA3-221ENST00000614198 KRTAP4-4Q9BYR3 166 aa1.98□□□□□ -2.09
GGA3-221ENST00000614198 KRTAP21-2Q3LI59 83 aa1.92□□□□□ -2.1
GGA3-221ENST00000614198 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.88□□□□□ -2.11
GGA3-221ENST00000614198 KRTAP21-1Q3LI58 79 aa1.84□□□□□ -2.11
GGA3-221ENST00000614198 KRTAP5-11Q6L8G4 156 aa1.8□□□□□ -2.12
GGA3-221ENST00000614198 AHNAKQ09666 5890 aaKnown RBP1.77□□□□□ -2.13
GGA3-221ENST00000614198 PHGR1C9JFL3 82 aa1.59□□□□□ -2.15
GGA3-221ENST00000614198 MUC16Q8WXI7 14507 aa0.99□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 224.9 ms