RNA–Protein interactions for RNA: ENST00000612548.4

CIT-219, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 1 (best) BASIC

Gene CIT, Length 1,799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-219ENST00000612548 KRTAP5-9P26371 169 aa5.3□□□□□ -1.56
CIT-219ENST00000612548 MT1LQ93083 61 aa5.27□□□□□ -1.57
CIT-219ENST00000612548 KRTAP6-3Q3LI67 103 aa5.25□□□□□ -1.57
CIT-219ENST00000612548 KRTAP19-3Q7Z4W3 81 aa5.2□□□□□ -1.58
CIT-219ENST00000612548 MDN1Q9NU22 5596 aa5.2□□□□□ -1.58
CIT-219ENST00000612548 KRTAP9-7A8MTY7 169 aa5.16□□□□□ -1.58
CIT-219ENST00000612548 A0A0A0MQY5 61 aa5.15□□□□□ -1.58
CIT-219ENST00000612548 LCE3CQ5T5A8 94 aa5.14□□□□□ -1.59
CIT-219ENST00000612548 LCE1AQ5T7P2 110 aa5.13□□□□□ -1.59
CIT-219ENST00000612548 MT1GP13640 62 aa5.12□□□□□ -1.59
CIT-219ENST00000612548 SPRR2EP22531 72 aa5.12□□□□□ -1.59
CIT-219ENST00000612548 SPRR2BP35325 72 aa5.12□□□□□ -1.59
CIT-219ENST00000612548 SPRR2AP35326 72 aa5.12□□□□□ -1.59
CIT-219ENST00000612548 KRTAP4-7Q9BYR0 210 aa5.11□□□□□ -1.59
CIT-219ENST00000612548 KRTAP19-4Q3LI73 84 aa5.1□□□□□ -1.59
CIT-219ENST00000612548 LCE5AQ5TCM9 118 aa5.1□□□□□ -1.59
CIT-219ENST00000612548 MT1MQ8N339 61 aa5.09□□□□□ -1.6
CIT-219ENST00000612548 KRTAP4-3Q9BYR4 195 aa5.01□□□□□ -1.61
CIT-219ENST00000612548 SPRR2DP22532 72 aa4.93□□□□□ -1.62
CIT-219ENST00000612548 NEBP20929 6669 aa4.9□□□□□ -1.63
CIT-219ENST00000612548 DSTQ03001 7570 aaKnown RBP4.88□□□□□ -1.63
CIT-219ENST00000612548 KRTAP9-6A8MVA2 160 aa4.88□□□□□ -1.63
CIT-219ENST00000612548 LOC100996750A0A140TA64 210 aa4.81□□□□□ -1.64
CIT-219ENST00000612548 LCE3BQ5TA77 95 aa4.74□□□□□ -1.65
CIT-219ENST00000612548 INE1O15225 51 aa4.73□□□□□ -1.65
CIT-219ENST00000612548 KRTAP2-3P0C7H8 128 aa4.6□□□□□ -1.67
CIT-219ENST00000612548 KRTAP2-4Q9BYR9 128 aa4.6□□□□□ -1.67
CIT-219ENST00000612548 KRTAP5-5Q701N2 237 aaPredicted RBP4.58□□□□□ -1.68
CIT-219ENST00000612548 KRTAP20-1Q3LI63 56 aa4.58□□□□□ -1.68
CIT-219ENST00000612548 KRTAP2-2Q9BYT5 123 aa4.51□□□□□ -1.69
CIT-219ENST00000612548 KRTAP2-1Q9BYU5 128 aa4.51□□□□□ -1.69
CIT-219ENST00000612548 MT1AP04731 61 aa4.47□□□□□ -1.69
CIT-219ENST00000612548 KRTAP6-1Q3LI64 71 aa4.45□□□□□ -1.7
CIT-219ENST00000612548 SYNE1Q8NF91 8797 aaKnown RBP4.43□□□□□ -1.7
CIT-219ENST00000612548 KRTAP5-4Q6L8H1 288 aa4.4□□□□□ -1.7
CIT-219ENST00000612548 LCE4AQ5TA78 99 aa4.35□□□□□ -1.71
CIT-219ENST00000612548 MT4P47944 62 aa4.3□□□□□ -1.72
CIT-219ENST00000612548 KRTAP4-9Q9BYQ8 210 aa4.28□□□□□ -1.72
CIT-219ENST00000612548 KRTAP12-4P60329 112 aa4.27□□□□□ -1.73
CIT-219ENST00000612548 KRTAP9-4Q9BYQ2 154 aa4.25□□□□□ -1.73
CIT-219ENST00000612548 KRTAP4-6Q9BYQ5 205 aa4.24□□□□□ -1.73
CIT-219ENST00000612548 LCE1DQ5T752 114 aa4.22□□□□□ -1.73
CIT-219ENST00000612548 HMCN1Q96RW7 5635 aa4.21□□□□□ -1.73
CIT-219ENST00000612548 KRTAP20-2Q3LI61 65 aa4.14□□□□□ -1.75
CIT-219ENST00000612548 KRTAP6-2Q3LI66 62 aa4.11□□□□□ -1.75
CIT-219ENST00000612548 MT3P25713 68 aa4.04□□□□□ -1.76
CIT-219ENST00000612548 KRTAP5-2Q701N4 177 aa3.99□□□□□ -1.77
CIT-219ENST00000612548 KRTAP5-3Q6L8H2 238 aa3.98□□□□□ -1.77
CIT-219ENST00000612548 LCE3DQ9BYE3 92 aa3.84□□□□□ -1.8
CIT-219ENST00000612548 AHNAK2Q8IVF2 5795 aa3.78□□□□□ -1.8
CIT-219ENST00000612548 OBSCNQ5VST9 7968 aa3.77□□□□□ -1.81
CIT-219ENST00000612548 LCE3EQ5T5B0 92 aa3.73□□□□□ -1.81
CIT-219ENST00000612548 KRTAP4-11Q9BYQ6 195 aa3.61□□□□□ -1.83
CIT-219ENST00000612548 KRTAP5-10Q6L8G5 202 aa3.54□□□□□ -1.84
CIT-219ENST00000612548 LCE1EQ5T753 118 aa3.51□□□□□ -1.85
CIT-219ENST00000612548 KRTAP5-8O75690 187 aa3.47□□□□□ -1.85
CIT-219ENST00000612548 KRTAP5-1Q6L8H4 278 aa3.46□□□□□ -1.86
CIT-219ENST00000612548 GPR98Q8WXG9 6306 aa3.42□□□□□ -1.86
CIT-219ENST00000612548 PRM1P04553 51 aa3.42□□□□□ -1.86
CIT-219ENST00000612548 MUC5ACP98088 5654 aa3.4□□□□□ -1.86
CIT-219ENST00000612548 LCE1BQ5T7P3 118 aa3.35□□□□□ -1.87
CIT-219ENST00000612548 KRTAP5-7Q6L8G8 165 aa3.33□□□□□ -1.88
CIT-219ENST00000612548 KRTAP4-2Q9BYR5 136 aa3.3□□□□□ -1.88
CIT-219ENST00000612548 LCE1CQ5T751 118 aa3.28□□□□□ -1.88
CIT-219ENST00000612548 KRTAP9-9Q9BYP9 154 aa3.15□□□□□ -1.9
CIT-219ENST00000612548 KRTAP4-12Q9BQ66 201 aa3.12□□□□□ -1.91
CIT-219ENST00000612548 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.05□□□□□ -1.92
CIT-219ENST00000612548 MUC5BQ9HC84 5762 aaPredicted RBP3.04□□□□□ -1.92
CIT-219ENST00000612548 KRTAP5-11Q6L8G4 156 aa2.92□□□□□ -1.94
CIT-219ENST00000612548 KRTAP21-2Q3LI59 83 aa2.9□□□□□ -1.94
CIT-219ENST00000612548 AHNAKQ09666 5890 aaKnown RBP2.87□□□□□ -1.95
CIT-219ENST00000612548 LCE1FQ5T754 118 aa2.63□□□□□ -1.99
CIT-219ENST00000612548 KRTAP4-4Q9BYR3 166 aa2.62□□□□□ -1.99
CIT-219ENST00000612548 PHGR1C9JFL3 82 aa2.5□□□□□ -2.01
CIT-219ENST00000612548 MUC19Q7Z5P9 8384 aa2.26□□□□□ -2.05
CIT-219ENST00000612548 KRTAP21-1Q3LI58 79 aa2.19□□□□□ -2.06
CIT-219ENST00000612548 MUC16Q8WXI7 14507 aa1.68□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 112.5 ms