RNA–Protein interactions for RNA: ENST00000611795.1

SCFD2-204, Transcript of sec1 family domain containing 2, humanhuman

TSL 5 BASIC

Gene SCFD2, Length 1,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-204ENST00000611795 KRTAP19-3Q7Z4W3 81 aa6.8□□□□□ -1.32
SCFD2-204ENST00000611795 MT1LQ93083 61 aa6.8□□□□□ -1.32
SCFD2-204ENST00000611795 NEBP20929 6669 aa6.79□□□□□ -1.32
SCFD2-204ENST00000611795 PRAC1Q96KF2 57 aa6.77□□□□□ -1.32
SCFD2-204ENST00000611795 LCE5AQ5TCM9 118 aa6.75□□□□□ -1.33
SCFD2-204ENST00000611795 MT1GP13640 62 aa6.69□□□□□ -1.34
SCFD2-204ENST00000611795 KTN1-AS1Q86SY8 53 aa6.69□□□□□ -1.34
SCFD2-204ENST00000611795 KRTAP15-1Q3LI76 137 aa6.68□□□□□ -1.34
SCFD2-204ENST00000611795 SPRR2DP22532 72 aa6.64□□□□□ -1.35
SCFD2-204ENST00000611795 MT1MQ8N339 61 aa6.63□□□□□ -1.35
SCFD2-204ENST00000611795 KRTAP4-7Q9BYR0 210 aa6.55□□□□□ -1.36
SCFD2-204ENST00000611795 KRTAP4-3Q9BYR4 195 aa6.5□□□□□ -1.37
SCFD2-204ENST00000611795 KRTAP19-4Q3LI73 84 aa6.49□□□□□ -1.37
SCFD2-204ENST00000611795 LCE3CQ5T5A8 94 aa6.45□□□□□ -1.38
SCFD2-204ENST00000611795 KRTAP20-1Q3LI63 56 aa6.44□□□□□ -1.38
SCFD2-204ENST00000611795 KRTAP2-3P0C7H8 128 aa6.43□□□□□ -1.38
SCFD2-204ENST00000611795 KRTAP2-4Q9BYR9 128 aa6.43□□□□□ -1.38
SCFD2-204ENST00000611795 LCE3BQ5TA77 95 aa6.42□□□□□ -1.38
SCFD2-204ENST00000611795 SVIPQ8NHG7 77 aa6.29□□□□□ -1.4
SCFD2-204ENST00000611795 KRTAP2-2Q9BYT5 123 aa6.26□□□□□ -1.41
SCFD2-204ENST00000611795 KRTAP2-1Q9BYU5 128 aa6.26□□□□□ -1.41
SCFD2-204ENST00000611795 DSTQ03001 7570 aaKnown RBP6.24□□□□□ -1.41
SCFD2-204ENST00000611795 LOC100996750A0A140TA64 210 aa6.17□□□□□ -1.42
SCFD2-204ENST00000611795 KRTAP9-6A8MVA2 160 aa6.15□□□□□ -1.43
SCFD2-204ENST00000611795 KRTAP5-5Q701N2 237 aaPredicted RBP6.04□□□□□ -1.44
SCFD2-204ENST00000611795 SPRR5A0A1B0GTR4 108 aa6.03□□□□□ -1.44
SCFD2-204ENST00000611795 KRTAP5-4Q6L8H1 288 aa5.97□□□□□ -1.45
SCFD2-204ENST00000611795 LCE4AQ5TA78 99 aa5.89□□□□□ -1.47
SCFD2-204ENST00000611795 KRTAP4-9Q9BYQ8 210 aa5.84□□□□□ -1.47
SCFD2-204ENST00000611795 MT1AP04731 61 aa5.78□□□□□ -1.48
SCFD2-204ENST00000611795 MT4P47944 62 aa5.77□□□□□ -1.49
SCFD2-204ENST00000611795 LCE1DQ5T752 114 aa5.77□□□□□ -1.49
SCFD2-204ENST00000611795 KRTAP6-1Q3LI64 71 aa5.74□□□□□ -1.49
SCFD2-204ENST00000611795 KRTAP4-6Q9BYQ5 205 aa5.73□□□□□ -1.49
SCFD2-204ENST00000611795 KRTAP12-4P60329 112 aa5.63□□□□□ -1.51
SCFD2-204ENST00000611795 SYNE1Q8NF91 8797 aaKnown RBP5.62□□□□□ -1.51
SCFD2-204ENST00000611795 HMCN1Q96RW7 5635 aa5.61□□□□□ -1.51
SCFD2-204ENST00000611795 KRTAP20-2Q3LI61 65 aa5.57□□□□□ -1.52
SCFD2-204ENST00000611795 H3BS24 57 aa5.54□□□□□ -1.52
SCFD2-204ENST00000611795 KRTAP9-4Q9BYQ2 154 aa5.53□□□□□ -1.52
SCFD2-204ENST00000611795 LUZP6Q538Z0 58 aa5.48□□□□□ -1.53
SCFD2-204ENST00000611795 KRTAP5-3Q6L8H2 238 aa5.41□□□□□ -1.54
SCFD2-204ENST00000611795 KRTAP6-2Q3LI66 62 aa5.35□□□□□ -1.55
SCFD2-204ENST00000611795 KRTAP5-2Q701N4 177 aa5.34□□□□□ -1.55
SCFD2-204ENST00000611795 MT3P25713 68 aa5.23□□□□□ -1.57
SCFD2-204ENST00000611795 AHNAK2Q8IVF2 5795 aa5.18□□□□□ -1.58
SCFD2-204ENST00000611795 NDUFAF8A1L188 74 aa5.11□□□□□ -1.59
SCFD2-204ENST00000611795 KRTAP5-10Q6L8G5 202 aa5.05□□□□□ -1.6
SCFD2-204ENST00000611795 GPR98Q8WXG9 6306 aa4.95□□□□□ -1.62
SCFD2-204ENST00000611795 KRTAP4-11Q9BYQ6 195 aa4.92□□□□□ -1.62
SCFD2-204ENST00000611795 KRTAP5-8O75690 187 aa4.76□□□□□ -1.65
SCFD2-204ENST00000611795 OBSCNQ5VST9 7968 aa4.76□□□□□ -1.65
SCFD2-204ENST00000611795 LCE3DQ9BYE3 92 aa4.75□□□□□ -1.65
SCFD2-204ENST00000611795 KRTAP5-7Q6L8G8 165 aa4.74□□□□□ -1.65
SCFD2-204ENST00000611795 KRTAP5-1Q6L8H4 278 aa4.68□□□□□ -1.66
SCFD2-204ENST00000611795 A0A0A0MQY5 61 aa4.67□□□□□ -1.66
SCFD2-204ENST00000611795 LCE1EQ5T753 118 aa4.66□□□□□ -1.66
SCFD2-204ENST00000611795 LCE3EQ5T5B0 92 aa4.57□□□□□ -1.68
SCFD2-204ENST00000611795 MUC5ACP98088 5654 aa4.44□□□□□ -1.7
SCFD2-204ENST00000611795 KRTAP4-2Q9BYR5 136 aa4.4□□□□□ -1.71
SCFD2-204ENST00000611795 LCE1BQ5T7P3 118 aa4.35□□□□□ -1.71
SCFD2-204ENST00000611795 KRTAP9-9Q9BYP9 154 aa4.34□□□□□ -1.71
SCFD2-204ENST00000611795 LCE1CQ5T751 118 aa4.33□□□□□ -1.72
SCFD2-204ENST00000611795 INE1O15225 51 aa4.17□□□□□ -1.74
SCFD2-204ENST00000611795 MUC5BQ9HC84 5762 aaPredicted RBP4.14□□□□□ -1.75
SCFD2-204ENST00000611795 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.03□□□□□ -1.76
SCFD2-204ENST00000611795 AHNAKQ09666 5890 aaKnown RBP4.02□□□□□ -1.77
SCFD2-204ENST00000611795 KRTAP5-11Q6L8G4 156 aa3.87□□□□□ -1.79
SCFD2-204ENST00000611795 PRM1P04553 51 aa3.81□□□□□ -1.8
SCFD2-204ENST00000611795 KRTAP21-2Q3LI59 83 aa3.78□□□□□ -1.8
SCFD2-204ENST00000611795 KRTAP4-12Q9BQ66 201 aa3.75□□□□□ -1.81
SCFD2-204ENST00000611795 LCE1FQ5T754 118 aa3.58□□□□□ -1.84
SCFD2-204ENST00000611795 KRTAP4-4Q9BYR3 166 aa3.38□□□□□ -1.87
SCFD2-204ENST00000611795 PHGR1C9JFL3 82 aa3.33□□□□□ -1.88
SCFD2-204ENST00000611795 MUC19Q7Z5P9 8384 aa2.87□□□□□ -1.95
SCFD2-204ENST00000611795 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
SCFD2-204ENST00000611795 MUC16Q8WXI7 14507 aa2.13□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 273.6 ms