RNA–Protein interactions for RNA: ENST00000611174.4

CENPE-208, Transcript of centromere protein E, humanhuman

TSL 5 BASIC

Gene CENPE, Length 8,260 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPE-208ENST00000611174 FLGP20930 4061 aaPredicted RBP1.7□□□□□ -2.14
CENPE-208ENST00000611174 LCE2BO14633 110 aa1.7□□□□□ -2.14
CENPE-208ENST00000611174 KRTAP4-7Q9BYR0 210 aa1.69□□□□□ -2.14
CENPE-208ENST00000611174 MT1GP13640 62 aa1.66□□□□□ -2.14
CENPE-208ENST00000611174 MUC12Q9UKN1 5478 aa1.63□□□□□ -2.15
CENPE-208ENST00000611174 LCE3BQ5TA77 95 aa1.63□□□□□ -2.15
CENPE-208ENST00000611174 SPRR5A0A1B0GTR4 108 aa1.63□□□□□ -2.15
CENPE-208ENST00000611174 KRTAP12-4P60329 112 aa1.61□□□□□ -2.15
CENPE-208ENST00000611174 LCE2AQ5TA79 106 aaPredicted RBP1.61□□□□□ -2.15
CENPE-208ENST00000611174 SPRR2EP22531 72 aa1.58□□□□□ -2.16
CENPE-208ENST00000611174 SPRR2BP35325 72 aa1.58□□□□□ -2.16
CENPE-208ENST00000611174 SPRR2AP35326 72 aa1.58□□□□□ -2.16
CENPE-208ENST00000611174 KRTAP4-3Q9BYR4 195 aa1.57□□□□□ -2.16
CENPE-208ENST00000611174 MT1LQ93083 61 aa1.57□□□□□ -2.16
CENPE-208ENST00000611174 MT1EP04732 61 aa1.56□□□□□ -2.16
CENPE-208ENST00000611174 KRTAP19-4Q3LI73 84 aa1.55□□□□□ -2.16
CENPE-208ENST00000611174 KRTAP19-3Q7Z4W3 81 aa1.55□□□□□ -2.16
CENPE-208ENST00000611174 LOC100996750A0A140TA64 210 aa1.54□□□□□ -2.16
CENPE-208ENST00000611174 KRTAP19-7Q3SYF9 63 aa1.54□□□□□ -2.16
CENPE-208ENST00000611174 GPR98Q8WXG9 6306 aa1.53□□□□□ -2.17
CENPE-208ENST00000611174 AHNAK2Q8IVF2 5795 aa1.52□□□□□ -2.17
CENPE-208ENST00000611174 LCE3DQ9BYE3 92 aa1.51□□□□□ -2.17
CENPE-208ENST00000611174 SPRR2DP22532 72 aa1.51□□□□□ -2.17
CENPE-208ENST00000611174 MT1MQ8N339 61 aa1.5□□□□□ -2.17
CENPE-208ENST00000611174 KRTAP19-6Q3LI70 58 aa1.49□□□□□ -2.17
CENPE-208ENST00000611174 KRTAP9-6A8MVA2 160 aa1.48□□□□□ -2.17
CENPE-208ENST00000611174 LCE3EQ5T5B0 92 aa1.48□□□□□ -2.17
CENPE-208ENST00000611174 KRTAP9-2Q9BYQ4 174 aa1.47□□□□□ -2.17
CENPE-208ENST00000611174 KRTAP4-9Q9BYQ8 210 aa1.46□□□□□ -2.18
CENPE-208ENST00000611174 MT3P25713 68 aa1.44□□□□□ -2.18
CENPE-208ENST00000611174 MT4P47944 62 aa1.42□□□□□ -2.18
CENPE-208ENST00000611174 AHNAKQ09666 5890 aaKnown RBP1.4□□□□□ -2.19
CENPE-208ENST00000611174 KRTAP2-3P0C7H8 128 aa1.37□□□□□ -2.19
CENPE-208ENST00000611174 KRTAP2-4Q9BYR9 128 aa1.37□□□□□ -2.19
CENPE-208ENST00000611174 KRTAP2-1Q9BYU5 128 aa1.37□□□□□ -2.19
CENPE-208ENST00000611174 PRM1P04553 51 aa1.37□□□□□ -2.19
CENPE-208ENST00000611174 MT1AP04731 61 aa1.36□□□□□ -2.19
CENPE-208ENST00000611174 LCE1BQ5T7P3 118 aa1.36□□□□□ -2.19
CENPE-208ENST00000611174 LCE1DQ5T752 114 aa1.36□□□□□ -2.19
CENPE-208ENST00000611174 KRTAP6-1Q3LI64 71 aa1.35□□□□□ -2.19
CENPE-208ENST00000611174 LCE5AQ5TCM9 118 aa1.34□□□□□ -2.2
CENPE-208ENST00000611174 LCE1AQ5T7P2 110 aa1.34□□□□□ -2.2
CENPE-208ENST00000611174 KRTAP9-6A0A140TA67 174 aa1.33□□□□□ -2.2
CENPE-208ENST00000611174 KRTAP9-7A8MTY7 169 aa1.3□□□□□ -2.2
CENPE-208ENST00000611174 KRTAP6-2Q3LI66 62 aa1.3□□□□□ -2.2
CENPE-208ENST00000611174 KRTAP9-9Q9BYP9 154 aa1.29□□□□□ -2.2
CENPE-208ENST00000611174 KRTAP9-4Q9BYQ2 154 aa1.29□□□□□ -2.2
CENPE-208ENST00000611174 KRTAP4-6Q9BYQ5 205 aa1.29□□□□□ -2.2
CENPE-208ENST00000611174 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.28□□□□□ -2.2
CENPE-208ENST00000611174 NEBP20929 6669 aa1.27□□□□□ -2.21
CENPE-208ENST00000611174 KRTAP5-2Q701N4 177 aa1.27□□□□□ -2.21
CENPE-208ENST00000611174 KRTAP6-3Q3LI67 103 aa1.25□□□□□ -2.21
CENPE-208ENST00000611174 KRTAP20-1Q3LI63 56 aa1.18□□□□□ -2.22
CENPE-208ENST00000611174 KRTAP2-2Q9BYT5 123 aa1.18□□□□□ -2.22
CENPE-208ENST00000611174 KRTAP5-9P26371 169 aa1.15□□□□□ -2.23
CENPE-208ENST00000611174 LCE4AQ5TA78 99 aa1.13□□□□□ -2.23
CENPE-208ENST00000611174 KRTAP4-12Q9BQ66 201 aa1.08□□□□□ -2.24
CENPE-208ENST00000611174 LCE1CQ5T751 118 aa1.08□□□□□ -2.24
CENPE-208ENST00000611174 LCE1EQ5T753 118 aa1.08□□□□□ -2.24
CENPE-208ENST00000611174 LCE1FQ5T754 118 aa1.08□□□□□ -2.24
CENPE-208ENST00000611174 KRTAP20-2Q3LI61 65 aa1.08□□□□□ -2.24
CENPE-208ENST00000611174 KRTAP4-11Q9BYQ6 195 aa1.06□□□□□ -2.24
CENPE-208ENST00000611174 KRTAP5-5Q701N2 237 aaPredicted RBP1.03□□□□□ -2.24
CENPE-208ENST00000611174 KRTAP5-3Q6L8H2 238 aa1.03□□□□□ -2.24
CENPE-208ENST00000611174 KRTAP4-4Q9BYR3 166 aa1.02□□□□□ -2.25
CENPE-208ENST00000611174 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.02□□□□□ -2.25
CENPE-208ENST00000611174 KRTAP4-2Q9BYR5 136 aa1.01□□□□□ -2.25
CENPE-208ENST00000611174 KRTAP5-4Q6L8H1 288 aa0.95□□□□□ -2.26
CENPE-208ENST00000611174 KRTAP5-8O75690 187 aa0.85□□□□□ -2.27
CENPE-208ENST00000611174 KRTAP5-10Q6L8G5 202 aa0.83□□□□□ -2.28
CENPE-208ENST00000611174 KRTAP5-7Q6L8G8 165 aa0.77□□□□□ -2.29
CENPE-208ENST00000611174 KRTAP5-1Q6L8H4 278 aa0.77□□□□□ -2.29
CENPE-208ENST00000611174 KRTAP21-2Q3LI59 83 aa0.72□□□□□ -2.29
CENPE-208ENST00000611174 KRTAP5-11Q6L8G4 156 aa0.7□□□□□ -2.3
CENPE-208ENST00000611174 PHGR1C9JFL3 82 aa0.65□□□□□ -2.3
CENPE-208ENST00000611174 KRTAP21-1Q3LI58 79 aa0.58□□□□□ -2.32
CENPE-208ENST00000611174 MUC16Q8WXI7 14507 aa0.45□□□□□ -2.34
Retrieved 77 of 20,778 RNA–protein pairs in 11.6 ms