RNA–Protein interactions for RNA: ENST00000611138.1

FAM228B-206, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 2

Gene FAM228B, Length 362 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-206ENST00000611138 CAMK2N1Q7Z7J9 78 aa3.57□□□□□ -1.84
FAM228B-206ENST00000611138 MACF1Q9UPN3 7388 aaKnown RBP3.56□□□□□ -1.84
FAM228B-206ENST00000611138 KRTAP12-2P59991 146 aa3.55□□□□□ -1.84
FAM228B-206ENST00000611138 PRAC1Q96KF2 57 aa3.49□□□□□ -1.85
FAM228B-206ENST00000611138 SYNE2Q8WXH0 6885 aaKnown RBP3.45□□□□□ -1.86
FAM228B-206ENST00000611138 LCE1AQ5T7P2 110 aa3.44□□□□□ -1.86
FAM228B-206ENST00000611138 KRTAP10-12P60413 245 aa3.42□□□□□ -1.86
FAM228B-206ENST00000611138 ROMO1P60602 79 aa3.42□□□□□ -1.86
FAM228B-206ENST00000611138 OBSCNQ5VST9 7968 aa3.41□□□□□ -1.86
FAM228B-206ENST00000611138 KRTAP6-3Q3LI67 103 aa3.4□□□□□ -1.87
FAM228B-206ENST00000611138 KMT2DO14686 5537 aa3.4□□□□□ -1.87
FAM228B-206ENST00000611138 C10orf95Q9H7T3 257 aa3.39□□□□□ -1.87
FAM228B-206ENST00000611138 KRTAP8-1Q8IUC2 63 aa3.38□□□□□ -1.87
FAM228B-206ENST00000611138 KRTAP2-2Q9BYT5 123 aa3.37□□□□□ -1.87
FAM228B-206ENST00000611138 KRTAP23-1A1A580 65 aa3.36□□□□□ -1.87
FAM228B-206ENST00000611138 KRTAP25-1Q3LHN0 102 aa3.35□□□□□ -1.87
FAM228B-206ENST00000611138 TNP1P09430 55 aa3.33□□□□□ -1.88
FAM228B-206ENST00000611138 SPRR2FQ96RM1 72 aa3.33□□□□□ -1.88
FAM228B-206ENST00000611138 KRTAP5-2Q701N4 177 aa3.28□□□□□ -1.88
FAM228B-206ENST00000611138 LCE3AQ5TA76 89 aa3.26□□□□□ -1.89
FAM228B-206ENST00000611138 MUC12Q9UKN1 5478 aa3.25□□□□□ -1.89
FAM228B-206ENST00000611138 KRTAP4-3Q9BYR4 195 aa3.24□□□□□ -1.89
FAM228B-206ENST00000611138 SPRR2EP22531 72 aa3.23□□□□□ -1.89
FAM228B-206ENST00000611138 SPRR2BP35325 72 aa3.23□□□□□ -1.89
FAM228B-206ENST00000611138 SPRR2AP35326 72 aa3.23□□□□□ -1.89
FAM228B-206ENST00000611138 KRTAP19-7Q3SYF9 63 aa3.22□□□□□ -1.89
FAM228B-206ENST00000611138 KRTAP19-5Q3LI72 72 aa3.21□□□□□ -1.9
FAM228B-206ENST00000611138 NEBP20929 6669 aa3.2□□□□□ -1.9
FAM228B-206ENST00000611138 MT1EP04732 61 aa3.19□□□□□ -1.9
FAM228B-206ENST00000611138 MDN1Q9NU22 5596 aa3.18□□□□□ -1.9
FAM228B-206ENST00000611138 SPRR2DP22532 72 aa3.12□□□□□ -1.91
FAM228B-206ENST00000611138 KRTAP12-3P60328 96 aa3.12□□□□□ -1.91
FAM228B-206ENST00000611138 PP632Q6XCG6 107 aa3.12□□□□□ -1.91
FAM228B-206ENST00000611138 KRTAP19-3Q7Z4W3 81 aa3.1□□□□□ -1.91
FAM228B-206ENST00000611138 MT1LQ93083 61 aa3.08□□□□□ -1.92
FAM228B-206ENST00000611138 KRTAP9-6A8MVA2 160 aa3.07□□□□□ -1.92
FAM228B-206ENST00000611138 KRTAP20-1Q3LI63 56 aa3.07□□□□□ -1.92
FAM228B-206ENST00000611138 MT1GP13640 62 aa3.04□□□□□ -1.92
FAM228B-206ENST00000611138 KRTAP2-3P0C7H8 128 aa3.03□□□□□ -1.92
FAM228B-206ENST00000611138 KRTAP2-4Q9BYR9 128 aa3.03□□□□□ -1.92
FAM228B-206ENST00000611138 MT1MQ8N339 61 aa3.02□□□□□ -1.93
FAM228B-206ENST00000611138 DSTQ03001 7570 aaKnown RBP2.94□□□□□ -1.94
FAM228B-206ENST00000611138 KRTAP2-1Q9BYU5 128 aa2.94□□□□□ -1.94
FAM228B-206ENST00000611138 LCE3CQ5T5A8 94 aa2.89□□□□□ -1.95
FAM228B-206ENST00000611138 NDUFAF8A1L188 74 aa2.88□□□□□ -1.95
FAM228B-206ENST00000611138 LUZP6Q538Z0 58 aa2.88□□□□□ -1.95
FAM228B-206ENST00000611138 KRTAP5-8O75690 187 aa2.83□□□□□ -1.96
FAM228B-206ENST00000611138 SPRR5A0A1B0GTR4 108 aa2.73□□□□□ -1.97
FAM228B-206ENST00000611138 KRTAP5-5Q701N2 237 aaPredicted RBP2.73□□□□□ -1.97
FAM228B-206ENST00000611138 MT4P47944 62 aa2.72□□□□□ -1.97
FAM228B-206ENST00000611138 HMCN1Q96RW7 5635 aa2.63□□□□□ -1.99
FAM228B-206ENST00000611138 A0A0A0MQY5 61 aa2.63□□□□□ -1.99
FAM228B-206ENST00000611138 MT1AP04731 61 aa2.62□□□□□ -1.99
FAM228B-206ENST00000611138 SYNE1Q8NF91 8797 aaKnown RBP2.6□□□□□ -1.99
FAM228B-206ENST00000611138 KRTAP12-4P60329 112 aa2.6□□□□□ -1.99
FAM228B-206ENST00000611138 KRTAP6-1Q3LI64 71 aa2.6□□□□□ -1.99
FAM228B-206ENST00000611138 MT3P25713 68 aa2.58□□□□□ -2
FAM228B-206ENST00000611138 KRTAP20-2Q3LI61 65 aa2.57□□□□□ -2
FAM228B-206ENST00000611138 AHNAK2Q8IVF2 5795 aa2.47□□□□□ -2.01
FAM228B-206ENST00000611138 KRTAP6-2Q3LI66 62 aa2.45□□□□□ -2.02
FAM228B-206ENST00000611138 LCE1FQ5T754 118 aa2.43□□□□□ -2.02
FAM228B-206ENST00000611138 GPR98Q8WXG9 6306 aa2.42□□□□□ -2.02
FAM228B-206ENST00000611138 INE1O15225 51 aa2.37□□□□□ -2.03
FAM228B-206ENST00000611138 KRTAP5-10Q6L8G5 202 aa2.37□□□□□ -2.03
FAM228B-206ENST00000611138 LCE1CQ5T751 118 aa2.33□□□□□ -2.04
FAM228B-206ENST00000611138 LCE1BQ5T7P3 118 aa2.33□□□□□ -2.04
FAM228B-206ENST00000611138 KRTAP5-7Q6L8G8 165 aa2.24□□□□□ -2.05
FAM228B-206ENST00000611138 LCE3DQ9BYE3 92 aa2.13□□□□□ -2.07
FAM228B-206ENST00000611138 LCE3EQ5T5B0 92 aa2.1□□□□□ -2.07
FAM228B-206ENST00000611138 MUC5ACP98088 5654 aa2.08□□□□□ -2.08
FAM228B-206ENST00000611138 MUC19Q7Z5P9 8384 aa2.08□□□□□ -2.08
FAM228B-206ENST00000611138 MUC5BQ9HC84 5762 aaPredicted RBP1.96□□□□□ -2.09
FAM228B-206ENST00000611138 AHNAKQ09666 5890 aaKnown RBP1.95□□□□□ -2.1
FAM228B-206ENST00000611138 PRM1P04553 51 aa1.81□□□□□ -2.12
FAM228B-206ENST00000611138 KRTAP21-2Q3LI59 83 aa1.72□□□□□ -2.13
FAM228B-206ENST00000611138 PHGR1C9JFL3 82 aa1.51□□□□□ -2.17
FAM228B-206ENST00000611138 KRTAP21-1Q3LI58 79 aa1.07□□□□□ -2.24
FAM228B-206ENST00000611138 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 47.9 ms