RNA–Protein interactions for RNA: ENST00000610976.1

U1.40-201, humanhuman

BASIC

Gene U1, Length 164 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.40-201ENST00000610976 MT1GP13640 62 aa3.13□□□□□ -1.91
U1.40-201ENST00000610976 SPRR2EP22531 72 aa3.09□□□□□ -1.91
U1.40-201ENST00000610976 SPRR2BP35325 72 aa3.09□□□□□ -1.91
U1.40-201ENST00000610976 SPRR2AP35326 72 aa3.09□□□□□ -1.91
U1.40-201ENST00000610976 LCE3CQ5T5A8 94 aa3.09□□□□□ -1.91
U1.40-201ENST00000610976 LCE1AQ5T7P2 110 aa3.09□□□□□ -1.91
U1.40-201ENST00000610976 LCE5AQ5TCM9 118 aa3.08□□□□□ -1.92
U1.40-201ENST00000610976 SYNE2Q8WXH0 6885 aaKnown RBP3.05□□□□□ -1.92
U1.40-201ENST00000610976 MT1MQ8N339 61 aa3.04□□□□□ -1.92
U1.40-201ENST00000610976 SPRR5A0A1B0GTR4 108 aa3.02□□□□□ -1.93
U1.40-201ENST00000610976 SPRR2DP22532 72 aa2.98□□□□□ -1.93
U1.40-201ENST00000610976 KRTAP4-7Q9BYR0 210 aa2.97□□□□□ -1.93
U1.40-201ENST00000610976 MUC12Q9UKN1 5478 aa2.95□□□□□ -1.94
U1.40-201ENST00000610976 LUZP6Q538Z0 58 aa2.95□□□□□ -1.94
U1.40-201ENST00000610976 KRTAP4-3Q9BYR4 195 aa2.91□□□□□ -1.94
U1.40-201ENST00000610976 MDN1Q9NU22 5596 aa2.88□□□□□ -1.95
U1.40-201ENST00000610976 LCE3BQ5TA77 95 aa2.87□□□□□ -1.95
U1.40-201ENST00000610976 NEBP20929 6669 aa2.85□□□□□ -1.95
U1.40-201ENST00000610976 KRTAP9-6A8MVA2 160 aa2.85□□□□□ -1.95
U1.40-201ENST00000610976 KRTAP2-3P0C7H8 128 aa2.85□□□□□ -1.95
U1.40-201ENST00000610976 KRTAP2-4Q9BYR9 128 aa2.85□□□□□ -1.95
U1.40-201ENST00000610976 LOC100996750A0A140TA64 210 aa2.8□□□□□ -1.96
U1.40-201ENST00000610976 KRTAP20-1Q3LI63 56 aa2.8□□□□□ -1.96
U1.40-201ENST00000610976 KRTAP2-2Q9BYT5 123 aa2.78□□□□□ -1.96
U1.40-201ENST00000610976 KRTAP2-1Q9BYU5 128 aa2.78□□□□□ -1.96
U1.40-201ENST00000610976 KRTAP5-5Q701N2 237 aaPredicted RBP2.75□□□□□ -1.97
U1.40-201ENST00000610976 NDUFAF8A1L188 74 aa2.74□□□□□ -1.97
U1.40-201ENST00000610976 DSTQ03001 7570 aaKnown RBP2.74□□□□□ -1.97
U1.40-201ENST00000610976 MT1AP04731 61 aa2.7□□□□□ -1.98
U1.40-201ENST00000610976 LCE4AQ5TA78 99 aa2.69□□□□□ -1.98
U1.40-201ENST00000610976 KRTAP5-4Q6L8H1 288 aa2.68□□□□□ -1.98
U1.40-201ENST00000610976 KRTAP12-4P60329 112 aa2.64□□□□□ -1.99
U1.40-201ENST00000610976 KRTAP6-1Q3LI64 71 aa2.63□□□□□ -1.99
U1.40-201ENST00000610976 H3BS24 57 aa2.6□□□□□ -1.99
U1.40-201ENST00000610976 KRTAP9-4Q9BYQ2 154 aa2.58□□□□□ -2
U1.40-201ENST00000610976 MT4P47944 62 aa2.56□□□□□ -2
U1.40-201ENST00000610976 LCE1DQ5T752 114 aa2.53□□□□□ -2
U1.40-201ENST00000610976 KRTAP4-9Q9BYQ8 210 aa2.52□□□□□ -2.01
U1.40-201ENST00000610976 KRTAP4-6Q9BYQ5 205 aa2.51□□□□□ -2.01
U1.40-201ENST00000610976 SYNE1Q8NF91 8797 aaKnown RBP2.49□□□□□ -2.01
U1.40-201ENST00000610976 KRTAP20-2Q3LI61 65 aa2.49□□□□□ -2.01
U1.40-201ENST00000610976 A0A0A0MQY5 61 aa2.48□□□□□ -2.01
U1.40-201ENST00000610976 MT3P25713 68 aa2.48□□□□□ -2.01
U1.40-201ENST00000610976 KRTAP6-2Q3LI66 62 aa2.45□□□□□ -2.02
U1.40-201ENST00000610976 KRTAP5-2Q701N4 177 aa2.41□□□□□ -2.02
U1.40-201ENST00000610976 KRTAP5-3Q6L8H2 238 aa2.4□□□□□ -2.03
U1.40-201ENST00000610976 INE1O15225 51 aa2.35□□□□□ -2.03
U1.40-201ENST00000610976 HMCN1Q96RW7 5635 aa2.35□□□□□ -2.03
U1.40-201ENST00000610976 LCE3DQ9BYE3 92 aa2.32□□□□□ -2.04
U1.40-201ENST00000610976 LCE3EQ5T5B0 92 aa2.26□□□□□ -2.05
U1.40-201ENST00000610976 LCE1EQ5T753 118 aa2.19□□□□□ -2.06
U1.40-201ENST00000610976 KRTAP4-11Q9BYQ6 195 aa2.19□□□□□ -2.06
U1.40-201ENST00000610976 KRTAP5-10Q6L8G5 202 aa2.15□□□□□ -2.07
U1.40-201ENST00000610976 OBSCNQ5VST9 7968 aa2.14□□□□□ -2.07
U1.40-201ENST00000610976 AHNAK2Q8IVF2 5795 aa2.11□□□□□ -2.07
U1.40-201ENST00000610976 KRTAP5-8O75690 187 aa2.09□□□□□ -2.07
U1.40-201ENST00000610976 KRTAP5-1Q6L8H4 278 aa2.08□□□□□ -2.08
U1.40-201ENST00000610976 KRTAP5-7Q6L8G8 165 aa2.05□□□□□ -2.08
U1.40-201ENST00000610976 LCE1CQ5T751 118 aa2.02□□□□□ -2.09
U1.40-201ENST00000610976 LCE1BQ5T7P3 118 aa2.02□□□□□ -2.09
U1.40-201ENST00000610976 GPR98Q8WXG9 6306 aa1.98□□□□□ -2.09
U1.40-201ENST00000610976 KRTAP4-2Q9BYR5 136 aa1.98□□□□□ -2.09
U1.40-201ENST00000610976 KRTAP9-9Q9BYP9 154 aa1.95□□□□□ -2.1
U1.40-201ENST00000610976 PRM1P04553 51 aa1.89□□□□□ -2.11
U1.40-201ENST00000610976 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.88□□□□□ -2.11
U1.40-201ENST00000610976 MUC5ACP98088 5654 aa1.86□□□□□ -2.11
U1.40-201ENST00000610976 KRTAP5-11Q6L8G4 156 aa1.78□□□□□ -2.12
U1.40-201ENST00000610976 KRTAP21-2Q3LI59 83 aa1.73□□□□□ -2.13
U1.40-201ENST00000610976 KRTAP4-12Q9BQ66 201 aa1.73□□□□□ -2.13
U1.40-201ENST00000610976 MUC5BQ9HC84 5762 aaPredicted RBP1.7□□□□□ -2.14
U1.40-201ENST00000610976 LCE1FQ5T754 118 aa1.67□□□□□ -2.14
U1.40-201ENST00000610976 AHNAKQ09666 5890 aaKnown RBP1.61□□□□□ -2.15
U1.40-201ENST00000610976 PHGR1C9JFL3 82 aa1.52□□□□□ -2.17
U1.40-201ENST00000610976 KRTAP4-4Q9BYR3 166 aa1.5□□□□□ -2.17
U1.40-201ENST00000610976 MUC19Q7Z5P9 8384 aa1.24□□□□□ -2.21
U1.40-201ENST00000610976 KRTAP21-1Q3LI58 79 aa1.16□□□□□ -2.22
U1.40-201ENST00000610976 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 12.3 ms