RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 MT1MQ8N339 61 aa6.82□□□□□ -1.32
TCF3-219ENST00000610756 MIR22HGQ0VDD5 57 aa6.78□□□□□ -1.32
TCF3-219ENST00000610756 V9GYY9 64 aa6.74□□□□□ -1.33
TCF3-219ENST00000610756 KRTAP4-9Q9BYQ8 210 aa6.71□□□□□ -1.34
TCF3-219ENST00000610756 Q1T7F1 81 aa6.7□□□□□ -1.34
TCF3-219ENST00000610756 KRTAP12-3P60328 96 aa6.69□□□□□ -1.34
TCF3-219ENST00000610756 PSPHP1O15172 72 aa6.67□□□□□ -1.34
TCF3-219ENST00000610756 K7ERS5 55 aa6.66□□□□□ -1.34
TCF3-219ENST00000610756 KRTAP25-1Q3LHN0 102 aa6.65□□□□□ -1.35
TCF3-219ENST00000610756 KRTAP4-3Q9BYR4 195 aa6.64□□□□□ -1.35
TCF3-219ENST00000610756 GPR98Q8WXG9 6306 aa6.63□□□□□ -1.35
TCF3-219ENST00000610756 LCE4AQ5TA78 99 aa6.6□□□□□ -1.35
TCF3-219ENST00000610756 LCE1DQ5T752 114 aa6.56□□□□□ -1.36
TCF3-219ENST00000610756 KRTAP4-7Q9BYR0 210 aa6.52□□□□□ -1.37
TCF3-219ENST00000610756 KRTAP5-4Q6L8H1 288 aa6.5□□□□□ -1.37
TCF3-219ENST00000610756 HMCN1Q96RW7 5635 aa6.49□□□□□ -1.37
TCF3-219ENST00000610756 MT4P47944 62 aa6.48□□□□□ -1.37
TCF3-219ENST00000610756 KRTAP23-1A1A580 65 aa6.45□□□□□ -1.38
TCF3-219ENST00000610756 A6NED7 52 aa6.44□□□□□ -1.38
TCF3-219ENST00000610756 KRTAP19-4Q3LI73 84 aa6.4□□□□□ -1.39
TCF3-219ENST00000610756 KRTAP4-6Q9BYQ5 205 aa6.33□□□□□ -1.4
TCF3-219ENST00000610756 CDC42SE1Q9NRR8 79 aa6.29□□□□□ -1.4
TCF3-219ENST00000610756 KRTAP15-1Q3LI76 137 aa6.27□□□□□ -1.41
TCF3-219ENST00000610756 KRTAP5-5Q701N2 237 aaPredicted RBP6.27□□□□□ -1.41
TCF3-219ENST00000610756 AHNAK2Q8IVF2 5795 aa6.23□□□□□ -1.41
TCF3-219ENST00000610756 ROMO1P60602 79 aa6.22□□□□□ -1.41
TCF3-219ENST00000610756 LOC100996750A0A140TA64 210 aa6.18□□□□□ -1.42
TCF3-219ENST00000610756 LCE3CQ5T5A8 94 aa6.17□□□□□ -1.42
TCF3-219ENST00000610756 BRK1Q8WUW1 75 aa6.17□□□□□ -1.42
TCF3-219ENST00000610756 SPRR5A0A1B0GTR4 108 aa6.12□□□□□ -1.43
TCF3-219ENST00000610756 KRTAP20-2Q3LI61 65 aa6.11□□□□□ -1.43
TCF3-219ENST00000610756 KRTAP12-4P60329 112 aa6.1□□□□□ -1.43
TCF3-219ENST00000610756 KRTAP5-10Q6L8G5 202 aa6.08□□□□□ -1.44
TCF3-219ENST00000610756 SYNE1Q8NF91 8797 aaKnown RBP6.02□□□□□ -1.44
TCF3-219ENST00000610756 PRO0628Q9UI54 55 aa6□□□□□ -1.45
TCF3-219ENST00000610756 KRTAP5-3Q6L8H2 238 aa5.96□□□□□ -1.46
TCF3-219ENST00000610756 MT1AP04731 61 aa5.84□□□□□ -1.47
TCF3-219ENST00000610756 KRTAP5-7Q6L8G8 165 aa5.84□□□□□ -1.47
TCF3-219ENST00000610756 KRTAP9-6A8MVA2 160 aa5.81□□□□□ -1.48
TCF3-219ENST00000610756 PMAIP1Q13794 54 aa5.81□□□□□ -1.48
TCF3-219ENST00000610756 KRTAP6-1Q3LI64 71 aa5.8□□□□□ -1.48
TCF3-219ENST00000610756 KRTAP5-2Q701N4 177 aa5.7□□□□□ -1.5
TCF3-219ENST00000610756 KRTAP9-4Q9BYQ2 154 aa5.67□□□□□ -1.5
TCF3-219ENST00000610756 KTN1-AS1Q86SY8 53 aa5.58□□□□□ -1.52
TCF3-219ENST00000610756 KRTAP4-11Q9BYQ6 195 aa5.58□□□□□ -1.52
TCF3-219ENST00000610756 KRTAP6-2Q3LI66 62 aa5.53□□□□□ -1.52
TCF3-219ENST00000610756 PRAC1Q96KF2 57 aa5.5□□□□□ -1.53
TCF3-219ENST00000610756 KRTAP5-8O75690 187 aa5.39□□□□□ -1.55
TCF3-219ENST00000610756 MT3P25713 68 aa5.37□□□□□ -1.55
TCF3-219ENST00000610756 OBSCNQ5VST9 7968 aa5.37□□□□□ -1.55
TCF3-219ENST00000610756 SVIPQ8NHG7 77 aa5.26□□□□□ -1.57
TCF3-219ENST00000610756 AHNAKQ09666 5890 aaKnown RBP5.14□□□□□ -1.59
TCF3-219ENST00000610756 MUC5BQ9HC84 5762 aaPredicted RBP5.13□□□□□ -1.59
TCF3-219ENST00000610756 MUC5ACP98088 5654 aa5.11□□□□□ -1.59
TCF3-219ENST00000610756 KRTAP5-1Q6L8H4 278 aa5.1□□□□□ -1.59
TCF3-219ENST00000610756 KRTAP9-9Q9BYP9 154 aa5.09□□□□□ -1.59
TCF3-219ENST00000610756 LCE1EQ5T753 118 aa4.94□□□□□ -1.62
TCF3-219ENST00000610756 KRTAP4-2Q9BYR5 136 aa4.62□□□□□ -1.67
TCF3-219ENST00000610756 LCE1BQ5T7P3 118 aa4.59□□□□□ -1.67
TCF3-219ENST00000610756 LCE1CQ5T751 118 aa4.58□□□□□ -1.68
TCF3-219ENST00000610756 LCE3DQ9BYE3 92 aa4.46□□□□□ -1.69
TCF3-219ENST00000610756 LUZP6Q538Z0 58 aa4.42□□□□□ -1.7
TCF3-219ENST00000610756 NDUFAF8A1L188 74 aa4.28□□□□□ -1.72
TCF3-219ENST00000610756 LCE3EQ5T5B0 92 aa4.21□□□□□ -1.74
TCF3-219ENST00000610756 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.18□□□□□ -1.74
TCF3-219ENST00000610756 KRTAP4-12Q9BQ66 201 aa4.15□□□□□ -1.75
TCF3-219ENST00000610756 KRTAP5-11Q6L8G4 156 aa4.12□□□□□ -1.75
TCF3-219ENST00000610756 LCE1FQ5T754 118 aa4.02□□□□□ -1.77
TCF3-219ENST00000610756 KRTAP21-2Q3LI59 83 aa3.84□□□□□ -1.79
TCF3-219ENST00000610756 A0A0A0MQY5 61 aa3.7□□□□□ -1.82
TCF3-219ENST00000610756 H3BS24 57 aa3.66□□□□□ -1.82
TCF3-219ENST00000610756 PHGR1C9JFL3 82 aa3.56□□□□□ -1.84
TCF3-219ENST00000610756 INE1O15225 51 aa3.54□□□□□ -1.84
TCF3-219ENST00000610756 KRTAP4-4Q9BYR3 166 aa3.46□□□□□ -1.85
TCF3-219ENST00000610756 MUC19Q7Z5P9 8384 aa3.3□□□□□ -1.88
TCF3-219ENST00000610756 PRM1P04553 51 aa3.16□□□□□ -1.9
TCF3-219ENST00000610756 KRTAP21-1Q3LI58 79 aa2.69□□□□□ -1.98
TCF3-219ENST00000610756 MUC16Q8WXI7 14507 aa2.33□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 104.7 ms