RNA–Protein interactions for RNA: ENST00000610733.1

TPM1-233, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 3,957 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-233ENST00000610733 MT1GP13640 62 aa3.32□□□□□ -1.88
TPM1-233ENST00000610733 KRTAP4-3Q9BYR4 195 aa3.32□□□□□ -1.88
TPM1-233ENST00000610733 LOC100996750A0A140TA64 210 aa3.31□□□□□ -1.88
TPM1-233ENST00000610733 KRTAP9-6A8MVA2 160 aa3.31□□□□□ -1.88
TPM1-233ENST00000610733 SPRR2FQ96RM1 72 aa3.24□□□□□ -1.89
TPM1-233ENST00000610733 LCE3BQ5TA77 95 aa3.23□□□□□ -1.89
TPM1-233ENST00000610733 KRTAP4-6Q9BYQ5 205 aa3.23□□□□□ -1.89
TPM1-233ENST00000610733 KRTAP19-7Q3SYF9 63 aa3.21□□□□□ -1.9
TPM1-233ENST00000610733 MT1LQ93083 61 aa3.19□□□□□ -1.9
TPM1-233ENST00000610733 KRTAP12-4P60329 112 aa3.19□□□□□ -1.9
TPM1-233ENST00000610733 SSPOA2VEC9 5147 aa3.18□□□□□ -1.9
TPM1-233ENST00000610733 MT1EP04732 61 aa3.16□□□□□ -1.9
TPM1-233ENST00000610733 KRTAP9-7A8MTY7 169 aa3.14□□□□□ -1.91
TPM1-233ENST00000610733 KRTAP4-9Q9BYQ8 210 aa3.12□□□□□ -1.91
TPM1-233ENST00000610733 KRTAP2-3P0C7H8 128 aa3.06□□□□□ -1.92
TPM1-233ENST00000610733 KRTAP2-4Q9BYR9 128 aa3.06□□□□□ -1.92
TPM1-233ENST00000610733 KRTAP2-1Q9BYU5 128 aa3.06□□□□□ -1.92
TPM1-233ENST00000610733 MACF1Q9UPN3 7388 aaKnown RBP3.05□□□□□ -1.92
TPM1-233ENST00000610733 SPRR2EP22531 72 aa3.04□□□□□ -1.92
TPM1-233ENST00000610733 SPRR2BP35325 72 aa3.04□□□□□ -1.92
TPM1-233ENST00000610733 SPRR2AP35326 72 aa3.04□□□□□ -1.92
TPM1-233ENST00000610733 GPR98Q8WXG9 6306 aa3.03□□□□□ -1.92
TPM1-233ENST00000610733 KRTAP19-3Q7Z4W3 81 aa3□□□□□ -1.93
TPM1-233ENST00000610733 MT1MQ8N339 61 aa3□□□□□ -1.93
TPM1-233ENST00000610733 KRTAP19-4Q3LI73 84 aa3□□□□□ -1.93
TPM1-233ENST00000610733 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.96□□□□□ -1.94
TPM1-233ENST00000610733 KRTAP19-6Q3LI70 58 aa2.94□□□□□ -1.94
TPM1-233ENST00000610733 KRTAP20-1Q3LI63 56 aa2.94□□□□□ -1.94
TPM1-233ENST00000610733 MDN1Q9NU22 5596 aa2.93□□□□□ -1.94
TPM1-233ENST00000610733 LCE5AQ5TCM9 118 aa2.93□□□□□ -1.94
TPM1-233ENST00000610733 SPRR2DP22532 72 aa2.92□□□□□ -1.94
TPM1-233ENST00000610733 LCE3DQ9BYE3 92 aa2.89□□□□□ -1.95
TPM1-233ENST00000610733 KRTAP4-12Q9BQ66 201 aa2.88□□□□□ -1.95
TPM1-233ENST00000610733 KRTAP9-4Q9BYQ2 154 aa2.87□□□□□ -1.95
TPM1-233ENST00000610733 KRTAP2-2Q9BYT5 123 aa2.87□□□□□ -1.95
TPM1-233ENST00000610733 PRM1P04553 51 aa2.83□□□□□ -1.96
TPM1-233ENST00000610733 LCE3EQ5T5B0 92 aa2.82□□□□□ -1.96
TPM1-233ENST00000610733 KRTAP6-1Q3LI64 71 aa2.8□□□□□ -1.96
TPM1-233ENST00000610733 KRTAP9-9Q9BYP9 154 aa2.8□□□□□ -1.96
TPM1-233ENST00000610733 LCE1AQ5T7P2 110 aa2.79□□□□□ -1.96
TPM1-233ENST00000610733 KRTAP6-3Q3LI67 103 aa2.77□□□□□ -1.97
TPM1-233ENST00000610733 MT4P47944 62 aa2.73□□□□□ -1.97
TPM1-233ENST00000610733 LCE4AQ5TA78 99 aa2.71□□□□□ -1.98
TPM1-233ENST00000610733 NEBP20929 6669 aa2.69□□□□□ -1.98
TPM1-233ENST00000610733 LCE1EQ5T753 118 aa2.66□□□□□ -1.98
TPM1-233ENST00000610733 LCE1FQ5T754 118 aa2.65□□□□□ -1.98
TPM1-233ENST00000610733 MT1AP04731 61 aa2.63□□□□□ -1.99
TPM1-233ENST00000610733 MUC19Q7Z5P9 8384 aa2.62□□□□□ -1.99
TPM1-233ENST00000610733 KRTAP6-2Q3LI66 62 aa2.61□□□□□ -1.99
TPM1-233ENST00000610733 KRTAP4-2Q9BYR5 136 aa2.56□□□□□ -2
TPM1-233ENST00000610733 LCE1DQ5T752 114 aa2.53□□□□□ -2
TPM1-233ENST00000610733 MT3P25713 68 aa2.52□□□□□ -2.01
TPM1-233ENST00000610733 LCE1BQ5T7P3 118 aa2.46□□□□□ -2.02
TPM1-233ENST00000610733 KRTAP5-5Q701N2 237 aaPredicted RBP2.46□□□□□ -2.02
TPM1-233ENST00000610733 KRTAP5-9P26371 169 aa2.45□□□□□ -2.02
TPM1-233ENST00000610733 KRTAP4-11Q9BYQ6 195 aa2.43□□□□□ -2.02
TPM1-233ENST00000610733 MUC5ACP98088 5654 aa2.27□□□□□ -2.05
TPM1-233ENST00000610733 KRTAP5-3Q6L8H2 238 aa2.22□□□□□ -2.05
TPM1-233ENST00000610733 MUC5BQ9HC84 5762 aaPredicted RBP2.19□□□□□ -2.06
TPM1-233ENST00000610733 HMCN1Q96RW7 5635 aa2.15□□□□□ -2.06
TPM1-233ENST00000610733 AHNAK2Q8IVF2 5795 aa2.11□□□□□ -2.07
TPM1-233ENST00000610733 KRTAP20-2Q3LI61 65 aa2.09□□□□□ -2.07
TPM1-233ENST00000610733 KRTAP4-4Q9BYR3 166 aa2.05□□□□□ -2.08
TPM1-233ENST00000610733 KRTAP5-4Q6L8H1 288 aa1.93□□□□□ -2.1
TPM1-233ENST00000610733 AHNAKQ09666 5890 aaKnown RBP1.93□□□□□ -2.1
TPM1-233ENST00000610733 LCE1CQ5T751 118 aa1.89□□□□□ -2.11
TPM1-233ENST00000610733 KRTAP5-7Q6L8G8 165 aa1.88□□□□□ -2.11
TPM1-233ENST00000610733 KRTAP5-10Q6L8G5 202 aa1.81□□□□□ -2.12
TPM1-233ENST00000610733 KRTAP5-8O75690 187 aa1.8□□□□□ -2.12
TPM1-233ENST00000610733 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.78□□□□□ -2.12
TPM1-233ENST00000610733 KRTAP5-2Q701N4 177 aa1.75□□□□□ -2.13
TPM1-233ENST00000610733 KRTAP5-11Q6L8G4 156 aa1.74□□□□□ -2.13
TPM1-233ENST00000610733 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
TPM1-233ENST00000610733 KRTAP5-1Q6L8H4 278 aa1.61□□□□□ -2.15
TPM1-233ENST00000610733 KRTAP21-2Q3LI59 83 aa1.6□□□□□ -2.15
TPM1-233ENST00000610733 PHGR1C9JFL3 82 aa1.52□□□□□ -2.17
TPM1-233ENST00000610733 MUC16Q8WXI7 14507 aa0.86□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 50.7 ms