RNA–Protein interactions for RNA: ENST00000610096.1

SYT6-207, Transcript of synaptotagmin 6, humanhuman

TSL 1 (best)

Gene SYT6, Length 1,897 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT6-207ENST00000610096 KRTAP12-3P60328 96 aa8.56□□□□□ -1.04
SYT6-207ENST00000610096 SPRR2EP22531 72 aa8.45□□□□□ -1.06
SYT6-207ENST00000610096 SPRR2BP35325 72 aa8.45□□□□□ -1.06
SYT6-207ENST00000610096 SPRR2AP35326 72 aa8.45□□□□□ -1.06
SYT6-207ENST00000610096 NEBP20929 6669 aa8.44□□□□□ -1.06
SYT6-207ENST00000610096 LCE1AQ5T7P2 110 aa8.43□□□□□ -1.06
SYT6-207ENST00000610096 NDUFAF8A1L188 74 aa8.4□□□□□ -1.07
SYT6-207ENST00000610096 MT1LQ93083 61 aa8.36□□□□□ -1.07
SYT6-207ENST00000610096 KRTAP19-3Q7Z4W3 81 aa8.33□□□□□ -1.08
SYT6-207ENST00000610096 SPRR5A0A1B0GTR4 108 aa8.32□□□□□ -1.08
SYT6-207ENST00000610096 LCE5AQ5TCM9 118 aa8.24□□□□□ -1.09
SYT6-207ENST00000610096 H3BS24 57 aa8.19□□□□□ -1.1
SYT6-207ENST00000610096 MT1GP13640 62 aa8.17□□□□□ -1.1
SYT6-207ENST00000610096 DSTQ03001 7570 aaKnown RBP8.15□□□□□ -1.1
SYT6-207ENST00000610096 KRTAP4-7Q9BYR0 210 aa8.15□□□□□ -1.11
SYT6-207ENST00000610096 SPRR2DP22532 72 aa8.14□□□□□ -1.11
SYT6-207ENST00000610096 LUZP6Q538Z0 58 aa8.14□□□□□ -1.11
SYT6-207ENST00000610096 MT1MQ8N339 61 aa8.13□□□□□ -1.11
SYT6-207ENST00000610096 KRTAP4-3Q9BYR4 195 aa8.06□□□□□ -1.12
SYT6-207ENST00000610096 LCE3CQ5T5A8 94 aa7.96□□□□□ -1.13
SYT6-207ENST00000610096 LCE3BQ5TA77 95 aa7.85□□□□□ -1.15
SYT6-207ENST00000610096 KRTAP19-4Q3LI73 84 aa7.83□□□□□ -1.16
SYT6-207ENST00000610096 KRTAP20-1Q3LI63 56 aa7.81□□□□□ -1.16
SYT6-207ENST00000610096 KRTAP2-3P0C7H8 128 aa7.77□□□□□ -1.17
SYT6-207ENST00000610096 KRTAP2-4Q9BYR9 128 aa7.77□□□□□ -1.17
SYT6-207ENST00000610096 LOC100996750A0A140TA64 210 aa7.67□□□□□ -1.18
SYT6-207ENST00000610096 KRTAP9-6A8MVA2 160 aa7.61□□□□□ -1.19
SYT6-207ENST00000610096 KRTAP2-2Q9BYT5 123 aa7.58□□□□□ -1.2
SYT6-207ENST00000610096 KRTAP2-1Q9BYU5 128 aa7.58□□□□□ -1.2
SYT6-207ENST00000610096 A0A0A0MQY5 61 aa7.41□□□□□ -1.22
SYT6-207ENST00000610096 KRTAP5-5Q701N2 237 aaPredicted RBP7.35□□□□□ -1.23
SYT6-207ENST00000610096 KRTAP5-4Q6L8H1 288 aa7.21□□□□□ -1.26
SYT6-207ENST00000610096 KRTAP4-9Q9BYQ8 210 aa7.2□□□□□ -1.26
SYT6-207ENST00000610096 MT4P47944 62 aa7.14□□□□□ -1.27
SYT6-207ENST00000610096 LCE4AQ5TA78 99 aa7.13□□□□□ -1.27
SYT6-207ENST00000610096 SYNE1Q8NF91 8797 aaKnown RBP7.12□□□□□ -1.27
SYT6-207ENST00000610096 KRTAP6-1Q3LI64 71 aa7.08□□□□□ -1.28
SYT6-207ENST00000610096 MT1AP04731 61 aa7.07□□□□□ -1.28
SYT6-207ENST00000610096 LCE1DQ5T752 114 aa7.07□□□□□ -1.28
SYT6-207ENST00000610096 HMCN1Q96RW7 5635 aa7.04□□□□□ -1.28
SYT6-207ENST00000610096 KRTAP4-6Q9BYQ5 205 aa7.02□□□□□ -1.28
SYT6-207ENST00000610096 KRTAP12-4P60329 112 aa6.9□□□□□ -1.31
SYT6-207ENST00000610096 INE1O15225 51 aa6.89□□□□□ -1.31
SYT6-207ENST00000610096 KRTAP20-2Q3LI61 65 aa6.8□□□□□ -1.32
SYT6-207ENST00000610096 KRTAP9-4Q9BYQ2 154 aa6.75□□□□□ -1.33
SYT6-207ENST00000610096 KRTAP6-2Q3LI66 62 aa6.6□□□□□ -1.35
SYT6-207ENST00000610096 KRTAP5-3Q6L8H2 238 aa6.56□□□□□ -1.36
SYT6-207ENST00000610096 KRTAP5-2Q701N4 177 aa6.46□□□□□ -1.38
SYT6-207ENST00000610096 AHNAK2Q8IVF2 5795 aa6.43□□□□□ -1.38
SYT6-207ENST00000610096 MT3P25713 68 aa6.41□□□□□ -1.38
SYT6-207ENST00000610096 OBSCNQ5VST9 7968 aa6.34□□□□□ -1.39
SYT6-207ENST00000610096 GPR98Q8WXG9 6306 aa6.17□□□□□ -1.42
SYT6-207ENST00000610096 KRTAP5-10Q6L8G5 202 aa6.09□□□□□ -1.44
SYT6-207ENST00000610096 KRTAP4-11Q9BYQ6 195 aa5.99□□□□□ -1.45
SYT6-207ENST00000610096 LCE3DQ9BYE3 92 aa5.89□□□□□ -1.47
SYT6-207ENST00000610096 KRTAP5-8O75690 187 aa5.79□□□□□ -1.48
SYT6-207ENST00000610096 LCE3EQ5T5B0 92 aa5.76□□□□□ -1.49
SYT6-207ENST00000610096 KRTAP5-1Q6L8H4 278 aa5.68□□□□□ -1.5
SYT6-207ENST00000610096 KRTAP5-7Q6L8G8 165 aa5.67□□□□□ -1.5
SYT6-207ENST00000610096 LCE1EQ5T753 118 aa5.62□□□□□ -1.51
SYT6-207ENST00000610096 MUC5ACP98088 5654 aa5.58□□□□□ -1.52
SYT6-207ENST00000610096 LCE1BQ5T7P3 118 aa5.41□□□□□ -1.54
SYT6-207ENST00000610096 KRTAP4-2Q9BYR5 136 aa5.35□□□□□ -1.55
SYT6-207ENST00000610096 PRM1P04553 51 aa5.28□□□□□ -1.56
SYT6-207ENST00000610096 KRTAP9-9Q9BYP9 154 aa5.28□□□□□ -1.56
SYT6-207ENST00000610096 LCE1CQ5T751 118 aa5.26□□□□□ -1.57
SYT6-207ENST00000610096 MUC5BQ9HC84 5762 aaPredicted RBP5.23□□□□□ -1.57
SYT6-207ENST00000610096 AHNAKQ09666 5890 aaKnown RBP5□□□□□ -1.61
SYT6-207ENST00000610096 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.86□□□□□ -1.63
SYT6-207ENST00000610096 KRTAP5-11Q6L8G4 156 aa4.69□□□□□ -1.66
SYT6-207ENST00000610096 KRTAP4-12Q9BQ66 201 aa4.66□□□□□ -1.66
SYT6-207ENST00000610096 KRTAP21-2Q3LI59 83 aa4.62□□□□□ -1.67
SYT6-207ENST00000610096 LCE1FQ5T754 118 aa4.28□□□□□ -1.72
SYT6-207ENST00000610096 KRTAP4-4Q9BYR3 166 aa4.25□□□□□ -1.73
SYT6-207ENST00000610096 PHGR1C9JFL3 82 aa4.05□□□□□ -1.76
SYT6-207ENST00000610096 MUC19Q7Z5P9 8384 aa3.82□□□□□ -1.8
SYT6-207ENST00000610096 KRTAP21-1Q3LI58 79 aa3.33□□□□□ -1.88
SYT6-207ENST00000610096 MUC16Q8WXI7 14507 aa2.56□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 54 ms