RNA–Protein interactions for RNA: ENST00000610088.5

LINC01278-206, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 4 BASIC

Gene LINC01278, Length 554 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-206ENST00000610088 TNP1P09430 55 aa4.69□□□□□ -1.66
LINC01278-206ENST00000610088 KRTAP5-4Q6L8H1 288 aa4.69□□□□□ -1.66
LINC01278-206ENST00000610088 PP632Q6XCG6 107 aa4.69□□□□□ -1.66
LINC01278-206ENST00000610088 MT1GP13640 62 aa4.67□□□□□ -1.66
LINC01278-206ENST00000610088 TMEM258P61165 79 aa4.66□□□□□ -1.66
LINC01278-206ENST00000610088 C10orf95Q9H7T3 257 aa4.61□□□□□ -1.67
LINC01278-206ENST00000610088 LINC01558Q9Y6Z2 57 aa4.6□□□□□ -1.67
LINC01278-206ENST00000610088 LCE3AQ5TA76 89 aa4.59□□□□□ -1.67
LINC01278-206ENST00000610088 UQCR11O14957 56 aa4.56□□□□□ -1.68
LINC01278-206ENST00000610088 MT1MQ8N339 61 aa4.56□□□□□ -1.68
LINC01278-206ENST00000610088 MT1LQ93083 61 aa4.56□□□□□ -1.68
LINC01278-206ENST00000610088 AHNAKQ09666 5890 aaKnown RBP4.55□□□□□ -1.68
LINC01278-206ENST00000610088 KRTAP20-2Q3LI61 65 aa4.52□□□□□ -1.69
LINC01278-206ENST00000610088 KRTAP4-3Q9BYR4 195 aa4.47□□□□□ -1.69
LINC01278-206ENST00000610088 K7ERS5 55 aa4.46□□□□□ -1.7
LINC01278-206ENST00000610088 MUC5ACP98088 5654 aa4.46□□□□□ -1.7
LINC01278-206ENST00000610088 KRTAP12-3P60328 96 aa4.45□□□□□ -1.7
LINC01278-206ENST00000610088 MIR22HGQ0VDD5 57 aa4.44□□□□□ -1.7
LINC01278-206ENST00000610088 MUC5BQ9HC84 5762 aaPredicted RBP4.42□□□□□ -1.7
LINC01278-206ENST00000610088 V9GYY9 64 aa4.42□□□□□ -1.7
LINC01278-206ENST00000610088 KRTAP25-1Q3LHN0 102 aa4.39□□□□□ -1.71
LINC01278-206ENST00000610088 KRTAP4-7Q9BYR0 210 aa4.37□□□□□ -1.71
LINC01278-206ENST00000610088 Q1T7F1 81 aa4.36□□□□□ -1.71
LINC01278-206ENST00000610088 PCP4P48539 62 aa4.34□□□□□ -1.71
LINC01278-206ENST00000610088 PSPHP1O15172 72 aa4.33□□□□□ -1.72
LINC01278-206ENST00000610088 KRTAP4-11Q9BYQ6 195 aa4.32□□□□□ -1.72
LINC01278-206ENST00000610088 KRTAP12-4P60329 112 aa4.29□□□□□ -1.72
LINC01278-206ENST00000610088 KRTAP5-8O75690 187 aa4.27□□□□□ -1.73
LINC01278-206ENST00000610088 RPS28P62857 69 aaKnown RBP4.23□□□□□ -1.73
LINC01278-206ENST00000610088 A6NED7 52 aa4.22□□□□□ -1.73
LINC01278-206ENST00000610088 KRTAP19-4Q3LI73 84 aa4.2□□□□□ -1.74
LINC01278-206ENST00000610088 KRTAP23-1A1A580 65 aa4.18□□□□□ -1.74
LINC01278-206ENST00000610088 CDC42SE1Q9NRR8 79 aa4.16□□□□□ -1.74
LINC01278-206ENST00000610088 SYNE1Q8NF91 8797 aaKnown RBP4.16□□□□□ -1.74
LINC01278-206ENST00000610088 KRTAP15-1Q3LI76 137 aa4.15□□□□□ -1.75
LINC01278-206ENST00000610088 KRTAP5-5Q701N2 237 aaPredicted RBP4.15□□□□□ -1.75
LINC01278-206ENST00000610088 KRTAP9-9Q9BYP9 154 aa4.15□□□□□ -1.75
LINC01278-206ENST00000610088 LOC100996750A0A140TA64 210 aa4.1□□□□□ -1.75
LINC01278-206ENST00000610088 LCE3CQ5T5A8 94 aa4.08□□□□□ -1.76
LINC01278-206ENST00000610088 ROMO1P60602 79 aa4.06□□□□□ -1.76
LINC01278-206ENST00000610088 KRTAP5-2Q701N4 177 aa3.99□□□□□ -1.77
LINC01278-206ENST00000610088 OBSCNQ5VST9 7968 aa3.98□□□□□ -1.77
LINC01278-206ENST00000610088 MT1AP04731 61 aa3.89□□□□□ -1.79
LINC01278-206ENST00000610088 KRTAP6-1Q3LI64 71 aa3.86□□□□□ -1.79
LINC01278-206ENST00000610088 KRTAP9-4Q9BYQ2 154 aa3.78□□□□□ -1.8
LINC01278-206ENST00000610088 KRTAP9-6A8MVA2 160 aa3.77□□□□□ -1.81
LINC01278-206ENST00000610088 KRTAP5-1Q6L8H4 278 aa3.72□□□□□ -1.81
LINC01278-206ENST00000610088 BRK1Q8WUW1 75 aa3.72□□□□□ -1.81
LINC01278-206ENST00000610088 KRTAP6-2Q3LI66 62 aa3.71□□□□□ -1.82
LINC01278-206ENST00000610088 MT3P25713 68 aa3.6□□□□□ -1.83
LINC01278-206ENST00000610088 PMAIP1Q13794 54 aa3.51□□□□□ -1.85
LINC01278-206ENST00000610088 PRO0628Q9UI54 55 aa3.49□□□□□ -1.85
LINC01278-206ENST00000610088 PRAC1Q96KF2 57 aa3.31□□□□□ -1.88
LINC01278-206ENST00000610088 LCE1EQ5T753 118 aa3.27□□□□□ -1.89
LINC01278-206ENST00000610088 KRTAP4-12Q9BQ66 201 aa3.26□□□□□ -1.89
LINC01278-206ENST00000610088 KRTAP4-2Q9BYR5 136 aa3.26□□□□□ -1.89
LINC01278-206ENST00000610088 LCE1BQ5T7P3 118 aa3.24□□□□□ -1.89
LINC01278-206ENST00000610088 KTN1-AS1Q86SY8 53 aa3.24□□□□□ -1.89
LINC01278-206ENST00000610088 PHGR1C9JFL3 82 aa3.12□□□□□ -1.91
LINC01278-206ENST00000610088 SVIPQ8NHG7 77 aa3.07□□□□□ -1.92
LINC01278-206ENST00000610088 LCE1CQ5T751 118 aa3.03□□□□□ -1.92
LINC01278-206ENST00000610088 KRTAP5-11Q6L8G4 156 aa2.99□□□□□ -1.93
LINC01278-206ENST00000610088 LCE3DQ9BYE3 92 aa2.96□□□□□ -1.94
LINC01278-206ENST00000610088 LCE1FQ5T754 118 aa2.91□□□□□ -1.94
LINC01278-206ENST00000610088 LUZP6Q538Z0 58 aa2.87□□□□□ -1.95
LINC01278-206ENST00000610088 H3BS24 57 aa2.85□□□□□ -1.95
LINC01278-206ENST00000610088 LCE3EQ5T5B0 92 aa2.78□□□□□ -1.96
LINC01278-206ENST00000610088 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.73□□□□□ -1.97
LINC01278-206ENST00000610088 KRTAP21-2Q3LI59 83 aa2.51□□□□□ -2.01
LINC01278-206ENST00000610088 MUC19Q7Z5P9 8384 aa2.51□□□□□ -2.01
LINC01278-206ENST00000610088 NDUFAF8A1L188 74 aa2.49□□□□□ -2.01
LINC01278-206ENST00000610088 KRTAP4-4Q9BYR3 166 aa2.43□□□□□ -2.02
LINC01278-206ENST00000610088 KRTAP21-1Q3LI58 79 aa2.35□□□□□ -2.03
LINC01278-206ENST00000610088 A0A0A0MQY5 61 aa2.26□□□□□ -2.05
LINC01278-206ENST00000610088 INE1O15225 51 aa2.09□□□□□ -2.07
LINC01278-206ENST00000610088 PRM1P04553 51 aa2.07□□□□□ -2.08
LINC01278-206ENST00000610088 MUC16Q8WXI7 14507 aa1.73□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 206.7 ms