RNA–Protein interactions for RNA: ENST00000608623.1

LINC01278-202, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

Gene LINC01278, Length 5,053 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-202ENST00000608623 KRTAP4-11Q9BYQ6 195 aa1.45□□□□□ -2.18
LINC01278-202ENST00000608623 KRTAP2-3P0C7H8 128 aa1.45□□□□□ -2.18
LINC01278-202ENST00000608623 KRTAP2-4Q9BYR9 128 aa1.45□□□□□ -2.18
LINC01278-202ENST00000608623 LCE3AQ5TA76 89 aa1.44□□□□□ -2.18
LINC01278-202ENST00000608623 KRTAP5-2Q701N4 177 aa1.44□□□□□ -2.18
LINC01278-202ENST00000608623 PKD1P98161 4303 aa1.44□□□□□ -2.18
LINC01278-202ENST00000608623 MT4P47944 62 aa1.44□□□□□ -2.18
LINC01278-202ENST00000608623 KRTAP6-3Q3LI67 103 aa1.44□□□□□ -2.18
LINC01278-202ENST00000608623 DNAH8Q96JB1 4490 aa1.44□□□□□ -2.18
LINC01278-202ENST00000608623 PKHD1P08F94 4074 aa1.43□□□□□ -2.18
LINC01278-202ENST00000608623 KRTAP19-6Q3LI70 58 aa1.42□□□□□ -2.18
LINC01278-202ENST00000608623 GPR98Q8WXG9 6306 aa1.41□□□□□ -2.18
LINC01278-202ENST00000608623 MT3P25713 68 aa1.4□□□□□ -2.19
LINC01278-202ENST00000608623 KRTAP19-8Q3LI54 63 aa1.39□□□□□ -2.19
LINC01278-202ENST00000608623 KRTAP19-5Q3LI72 72 aa1.39□□□□□ -2.19
LINC01278-202ENST00000608623 KRTAP2-2Q9BYT5 123 aa1.39□□□□□ -2.19
LINC01278-202ENST00000608623 KRTAP2-1Q9BYU5 128 aa1.39□□□□□ -2.19
LINC01278-202ENST00000608623 FAT4Q6V0I7 4981 aa1.38□□□□□ -2.19
LINC01278-202ENST00000608623 MACF1Q9UPN3 7388 aaKnown RBP1.38□□□□□ -2.19
LINC01278-202ENST00000608623 MUC2Q02817 5179 aa1.37□□□□□ -2.19
LINC01278-202ENST00000608623 MT1BP07438 61 aa1.37□□□□□ -2.19
LINC01278-202ENST00000608623 HMCN2Q8NDA2 5059 aa1.37□□□□□ -2.19
LINC01278-202ENST00000608623 MT1GP13640 62 aa1.35□□□□□ -2.19
LINC01278-202ENST00000608623 LPAP08519 4548 aa1.34□□□□□ -2.2
LINC01278-202ENST00000608623 MT1XP80297 61 aa1.32□□□□□ -2.2
LINC01278-202ENST00000608623 KRTAP19-2Q3LHN2 52 aa1.32□□□□□ -2.2
LINC01278-202ENST00000608623 LCE1DQ5T752 114 aa1.32□□□□□ -2.2
LINC01278-202ENST00000608623 KRTAP19-3Q7Z4W3 81 aa1.32□□□□□ -2.2
LINC01278-202ENST00000608623 NEBP20929 6669 aa1.32□□□□□ -2.2
LINC01278-202ENST00000608623 INE1O15225 51 aa1.31□□□□□ -2.2
LINC01278-202ENST00000608623 SYNE1Q8NF91 8797 aaKnown RBP1.31□□□□□ -2.2
LINC01278-202ENST00000608623 KMT2DO14686 5537 aa1.28□□□□□ -2.2
LINC01278-202ENST00000608623 OBSCNQ5VST9 7968 aa1.26□□□□□ -2.21
LINC01278-202ENST00000608623 KRTAP5-11Q6L8G4 156 aa1.25□□□□□ -2.21
LINC01278-202ENST00000608623 LCE3CQ5T5A8 94 aa1.25□□□□□ -2.21
LINC01278-202ENST00000608623 KRTAP5-9P26371 169 aa1.24□□□□□ -2.21
LINC01278-202ENST00000608623 TNXBP22105 4242 aa1.24□□□□□ -2.21
LINC01278-202ENST00000608623 LCE1BQ5T7P3 118 aa1.23□□□□□ -2.21
LINC01278-202ENST00000608623 MT1EP04732 61 aa1.22□□□□□ -2.21
LINC01278-202ENST00000608623 DSTQ03001 7570 aaKnown RBP1.22□□□□□ -2.21
LINC01278-202ENST00000608623 KRTAP5-4Q6L8H1 288 aa1.22□□□□□ -2.21
LINC01278-202ENST00000608623 MT1MQ8N339 61 aa1.21□□□□□ -2.22
LINC01278-202ENST00000608623 FLGP20930 4061 aaPredicted RBP1.2□□□□□ -2.22
LINC01278-202ENST00000608623 MUC17Q685J3 4493 aa1.2□□□□□ -2.22
LINC01278-202ENST00000608623 MT1LQ93083 61 aa1.19□□□□□ -2.22
LINC01278-202ENST00000608623 MDN1Q9NU22 5596 aa1.19□□□□□ -2.22
LINC01278-202ENST00000608623 USH2AO75445 5202 aa1.19□□□□□ -2.22
LINC01278-202ENST00000608623 SSPOA2VEC9 5147 aa1.18□□□□□ -2.22
LINC01278-202ENST00000608623 KRTAP4-3Q9BYR4 195 aa1.16□□□□□ -2.22
LINC01278-202ENST00000608623 FCGBPQ9Y6R7 5405 aaPredicted RBP1.15□□□□□ -2.23
LINC01278-202ENST00000608623 KRTAP5-1Q6L8H4 278 aa1.13□□□□□ -2.23
LINC01278-202ENST00000608623 KRTAP4-4Q9BYR3 166 aa1.13□□□□□ -2.23
LINC01278-202ENST00000608623 LCE1CQ5T751 118 aa1.12□□□□□ -2.23
LINC01278-202ENST00000608623 LCE1EQ5T753 118 aa1.12□□□□□ -2.23
LINC01278-202ENST00000608623 LCE3DQ9BYE3 92 aa1.11□□□□□ -2.23
LINC01278-202ENST00000608623 LCE3EQ5T5B0 92 aa1.1□□□□□ -2.23
LINC01278-202ENST00000608623 KRTAP19-7Q3SYF9 63 aa1.09□□□□□ -2.23
LINC01278-202ENST00000608623 MT1AP04731 61 aa1.09□□□□□ -2.24
LINC01278-202ENST00000608623 KRTAP6-2Q3LI66 62 aa1.06□□□□□ -2.24
LINC01278-202ENST00000608623 KRTAP20-2Q3LI61 65 aa1.01□□□□□ -2.25
LINC01278-202ENST00000608623 KRTAP6-1Q3LI64 71 aa1□□□□□ -2.25
LINC01278-202ENST00000608623 AHNAK2Q8IVF2 5795 aa1□□□□□ -2.25
LINC01278-202ENST00000608623 KRTAP5-5Q701N2 237 aaPredicted RBP0.99□□□□□ -2.25
LINC01278-202ENST00000608623 HMCN1Q96RW7 5635 aa0.99□□□□□ -2.25
LINC01278-202ENST00000608623 KRTAP9-6A8MVA2 160 aa0.99□□□□□ -2.25
LINC01278-202ENST00000608623 MUC12Q9UKN1 5478 aa0.98□□□□□ -2.25
LINC01278-202ENST00000608623 AHNAKQ09666 5890 aaKnown RBP0.98□□□□□ -2.25
LINC01278-202ENST00000608623 MUC19Q7Z5P9 8384 aa0.93□□□□□ -2.26
LINC01278-202ENST00000608623 KRTAP5-7Q6L8G8 165 aa0.92□□□□□ -2.26
LINC01278-202ENST00000608623 KRTAP5-8O75690 187 aa0.9□□□□□ -2.26
LINC01278-202ENST00000608623 MUC5BQ9HC84 5762 aaPredicted RBP0.9□□□□□ -2.26
LINC01278-202ENST00000608623 MUC5ACP98088 5654 aa0.85□□□□□ -2.27
LINC01278-202ENST00000608623 PRM1P04553 51 aa0.85□□□□□ -2.27
LINC01278-202ENST00000608623 PHGR1C9JFL3 82 aa0.84□□□□□ -2.28
LINC01278-202ENST00000608623 KRTAP5-10Q6L8G5 202 aa0.82□□□□□ -2.28
LINC01278-202ENST00000608623 KRTAP21-1Q3LI58 79 aa0.6□□□□□ -2.31
LINC01278-202ENST00000608623 KRTAP21-2Q3LI59 83 aa0.55□□□□□ -2.32
LINC01278-202ENST00000608623 MUC16Q8WXI7 14507 aa0.44□□□□□ -2.34
Retrieved 78 of 20,778 RNA–protein pairs in 50.2 ms