RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 KRTAP12-1P59990 96 aa4.76□□□□□ -1.65
POLR2J3-219ENST00000608621 A0A1B0GU33 70 aa4.75□□□□□ -1.65
POLR2J3-219ENST00000608621 MT1LQ93083 61 aa4.74□□□□□ -1.65
POLR2J3-219ENST00000608621 HMCN1Q96RW7 5635 aa4.71□□□□□ -1.66
POLR2J3-219ENST00000608621 CCDC179H3BU77 68 aa4.71□□□□□ -1.66
POLR2J3-219ENST00000608621 KRTAP4-3Q9BYR4 195 aa4.69□□□□□ -1.66
POLR2J3-219ENST00000608621 KRTAP5-4Q6L8H1 288 aa4.66□□□□□ -1.66
POLR2J3-219ENST00000608621 C10orf95Q9H7T3 257 aa4.65□□□□□ -1.67
POLR2J3-219ENST00000608621 LCE3AQ5TA76 89 aa4.64□□□□□ -1.67
POLR2J3-219ENST00000608621 H7BZZ5 65 aa4.63□□□□□ -1.67
POLR2J3-219ENST00000608621 SMIM26A0A096LP01 95 aa4.61□□□□□ -1.67
POLR2J3-219ENST00000608621 KRTAP5-10Q6L8G5 202 aa4.61□□□□□ -1.67
POLR2J3-219ENST00000608621 AHNAK2Q8IVF2 5795 aa4.6□□□□□ -1.67
POLR2J3-219ENST00000608621 A8MU10 97 aa4.59□□□□□ -1.67
POLR2J3-219ENST00000608621 TNP1P09430 55 aa4.59□□□□□ -1.67
POLR2J3-219ENST00000608621 TMEM258P61165 79 aa4.58□□□□□ -1.68
POLR2J3-219ENST00000608621 ATP5EP56381 51 aaPredicted RBP4.57□□□□□ -1.68
POLR2J3-219ENST00000608621 A0A1B0GU69 56 aa4.56□□□□□ -1.68
POLR2J3-219ENST00000608621 KRTAP5-3Q6L8H2 238 aa4.47□□□□□ -1.69
POLR2J3-219ENST00000608621 KRTAP12-3P60328 96 aa4.45□□□□□ -1.7
POLR2J3-219ENST00000608621 KRTAP5-7Q6L8G8 165 aa4.45□□□□□ -1.7
POLR2J3-219ENST00000608621 KRTAP20-2Q3LI61 65 aa4.42□□□□□ -1.7
POLR2J3-219ENST00000608621 RPS28P62857 69 aaKnown RBP4.38□□□□□ -1.71
POLR2J3-219ENST00000608621 KRTAP5-5Q701N2 237 aaPredicted RBP4.38□□□□□ -1.71
POLR2J3-219ENST00000608621 SPRR5A0A1B0GTR4 108 aa4.37□□□□□ -1.71
POLR2J3-219ENST00000608621 KRTAP12-4P60329 112 aa4.34□□□□□ -1.71
POLR2J3-219ENST00000608621 PRR15LQ9BU68 103 aa4.34□□□□□ -1.71
POLR2J3-219ENST00000608621 LINC01558Q9Y6Z2 57 aa4.27□□□□□ -1.73
POLR2J3-219ENST00000608621 V9GYY9 64 aa4.27□□□□□ -1.73
POLR2J3-219ENST00000608621 Q1T7F1 81 aa4.24□□□□□ -1.73
POLR2J3-219ENST00000608621 SYNE1Q8NF91 8797 aaKnown RBP4.22□□□□□ -1.73
POLR2J3-219ENST00000608621 UQCR11O14957 56 aa4.21□□□□□ -1.74
POLR2J3-219ENST00000608621 KRTAP25-1Q3LHN0 102 aa4.21□□□□□ -1.74
POLR2J3-219ENST00000608621 PSPHP1O15172 72 aa4.15□□□□□ -1.75
POLR2J3-219ENST00000608621 MIR22HGQ0VDD5 57 aa4.09□□□□□ -1.75
POLR2J3-219ENST00000608621 KRTAP15-1Q3LI76 137 aa4.09□□□□□ -1.75
POLR2J3-219ENST00000608621 LCE3CQ5T5A8 94 aa4.09□□□□□ -1.75
POLR2J3-219ENST00000608621 A6NED7 52 aa4.05□□□□□ -1.76
POLR2J3-219ENST00000608621 K7ERS5 55 aa4.05□□□□□ -1.76
POLR2J3-219ENST00000608621 KRTAP23-1A1A580 65 aa4.04□□□□□ -1.76
POLR2J3-219ENST00000608621 KRTAP5-2Q701N4 177 aa4.04□□□□□ -1.76
POLR2J3-219ENST00000608621 KRTAP6-1Q3LI64 71 aa4.03□□□□□ -1.76
POLR2J3-219ENST00000608621 MT1AP04731 61 aa4.02□□□□□ -1.77
POLR2J3-219ENST00000608621 PRO0628Q9UI54 55 aa3.99□□□□□ -1.77
POLR2J3-219ENST00000608621 CDC42SE1Q9NRR8 79 aa3.97□□□□□ -1.77
POLR2J3-219ENST00000608621 KRTAP5-8O75690 187 aa3.96□□□□□ -1.78
POLR2J3-219ENST00000608621 BRK1Q8WUW1 75 aa3.92□□□□□ -1.78
POLR2J3-219ENST00000608621 KRTAP6-2Q3LI66 62 aa3.89□□□□□ -1.79
POLR2J3-219ENST00000608621 KRTAP9-6A8MVA2 160 aa3.87□□□□□ -1.79
POLR2J3-219ENST00000608621 MUC5BQ9HC84 5762 aaPredicted RBP3.82□□□□□ -1.8
POLR2J3-219ENST00000608621 MUC5ACP98088 5654 aa3.81□□□□□ -1.8
POLR2J3-219ENST00000608621 AHNAKQ09666 5890 aaKnown RBP3.8□□□□□ -1.8
POLR2J3-219ENST00000608621 OBSCNQ5VST9 7968 aa3.8□□□□□ -1.8
POLR2J3-219ENST00000608621 PMAIP1Q13794 54 aa3.76□□□□□ -1.81
POLR2J3-219ENST00000608621 ROMO1P60602 79 aa3.74□□□□□ -1.81
POLR2J3-219ENST00000608621 MT3P25713 68 aa3.7□□□□□ -1.82
POLR2J3-219ENST00000608621 KRTAP5-1Q6L8H4 278 aa3.68□□□□□ -1.82
POLR2J3-219ENST00000608621 KTN1-AS1Q86SY8 53 aa3.6□□□□□ -1.83
POLR2J3-219ENST00000608621 A0A0A0MQY5 61 aa3.59□□□□□ -1.83
POLR2J3-219ENST00000608621 PRAC1Q96KF2 57 aa3.46□□□□□ -1.86
POLR2J3-219ENST00000608621 LCE1EQ5T753 118 aa3.44□□□□□ -1.86
POLR2J3-219ENST00000608621 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.34□□□□□ -1.87
POLR2J3-219ENST00000608621 KRTAP5-11Q6L8G4 156 aa3.32□□□□□ -1.88
POLR2J3-219ENST00000608621 LCE1BQ5T7P3 118 aa3.28□□□□□ -1.88
POLR2J3-219ENST00000608621 LCE1CQ5T751 118 aa3.19□□□□□ -1.9
POLR2J3-219ENST00000608621 LUZP6Q538Z0 58 aa3.05□□□□□ -1.92
POLR2J3-219ENST00000608621 LCE3DQ9BYE3 92 aa2.91□□□□□ -1.94
POLR2J3-219ENST00000608621 NDUFAF8A1L188 74 aa2.87□□□□□ -1.95
POLR2J3-219ENST00000608621 LCE1FQ5T754 118 aa2.87□□□□□ -1.95
POLR2J3-219ENST00000608621 KRTAP4-4Q9BYR3 166 aa2.78□□□□□ -1.96
POLR2J3-219ENST00000608621 PHGR1C9JFL3 82 aa2.7□□□□□ -1.98
POLR2J3-219ENST00000608621 LCE3EQ5T5B0 92 aa2.7□□□□□ -1.98
POLR2J3-219ENST00000608621 KRTAP21-2Q3LI59 83 aa2.66□□□□□ -1.98
POLR2J3-219ENST00000608621 INE1O15225 51 aa2.51□□□□□ -2.01
POLR2J3-219ENST00000608621 MUC19Q7Z5P9 8384 aa2.36□□□□□ -2.03
POLR2J3-219ENST00000608621 KRTAP21-1Q3LI58 79 aa2.04□□□□□ -2.08
POLR2J3-219ENST00000608621 PRM1P04553 51 aa1.9□□□□□ -2.11
POLR2J3-219ENST00000608621 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 116.6 ms