RNA–Protein interactions for RNA: ENST00000607805.5

NECAB3-222, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 969 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-222	ENST00000607805	KRTAP5-7	Q6L8G8	165 aa		7.25	□□□□□ -1.25
NECAB3-222	ENST00000607805	C10orf95	Q9H7T3	257 aa		7.2	□□□□□ -1.26
NECAB3-222	ENST00000607805	SMIM26	A0A096LP01	95 aa		7.19	□□□□□ -1.26
NECAB3-222	ENST00000607805	LCE3A	Q5TA76	89 aa		7.18	□□□□□ -1.26
NECAB3-222	ENST00000607805	KRTAP5-3	Q6L8H2	238 aa		7.18	□□□□□ -1.26
NECAB3-222	ENST00000607805	ATP5E	P56381	51 aa	Predicted RBP	7.15	□□□□□ -1.26
NECAB3-222	ENST00000607805		A8MU10	97 aa		7.12	□□□□□ -1.27
NECAB3-222	ENST00000607805	PRR15L	Q9BU68	103 aa		7.08	□□□□□ -1.28
NECAB3-222	ENST00000607805	KRTAP20-2	Q3LI61	65 aa		7.06	□□□□□ -1.28
NECAB3-222	ENST00000607805	KRTAP4-7	Q9BYR0	210 aa		7.06	□□□□□ -1.28
NECAB3-222	ENST00000607805	TNP1	P09430	55 aa		7.01	□□□□□ -1.29
NECAB3-222	ENST00000607805	LINC01558	Q9Y6Z2	57 aa		7	□□□□□ -1.29
NECAB3-222	ENST00000607805	KRTAP5-5	Q701N2	237 aa	Predicted RBP	6.99	□□□□□ -1.29
NECAB3-222	ENST00000607805	SPRR5	A0A1B0GTR4	108 aa		6.98	□□□□□ -1.29
NECAB3-222	ENST00000607805	TMEM258	P61165	79 aa		6.97	□□□□□ -1.29
NECAB3-222	ENST00000607805	KRTAP12-3	P60328	96 aa		6.89	□□□□□ -1.31
NECAB3-222	ENST00000607805	UQCR11	O14957	56 aa		6.84	□□□□□ -1.31
NECAB3-222	ENST00000607805	KRTAP12-4	P60329	112 aa		6.82	□□□□□ -1.32
NECAB3-222	ENST00000607805	SYNE1	Q8NF91	8797 aa	Known RBP	6.79	□□□□□ -1.32
NECAB3-222	ENST00000607805	LOC100996750	A0A140TA64	210 aa		6.71	□□□□□ -1.34
NECAB3-222	ENST00000607805	MIR22HG	Q0VDD5	57 aa		6.69	□□□□□ -1.34
NECAB3-222	ENST00000607805		V9GYY9	64 aa		6.62	□□□□□ -1.35
NECAB3-222	ENST00000607805	PSPHP1	O15172	72 aa		6.59	□□□□□ -1.35
NECAB3-222	ENST00000607805		K7ERS5	55 aa		6.58	□□□□□ -1.36
NECAB3-222	ENST00000607805		Q1T7F1	81 aa		6.55	□□□□□ -1.36
NECAB3-222	ENST00000607805	KRTAP4-11	Q9BYQ6	195 aa		6.54	□□□□□ -1.36
NECAB3-222	ENST00000607805	SVIP	Q8NHG7	77 aa		6.53	□□□□□ -1.36
NECAB3-222	ENST00000607805	KRTAP25-1	Q3LHN0	102 aa		6.52	□□□□□ -1.37
NECAB3-222	ENST00000607805	KRTAP19-4	Q3LI73	84 aa		6.5	□□□□□ -1.37
NECAB3-222	ENST00000607805	KRTAP5-2	Q701N4	177 aa		6.49	□□□□□ -1.37
NECAB3-222	ENST00000607805	MUC5B	Q9HC84	5762 aa	Predicted RBP	6.4	□□□□□ -1.39
NECAB3-222	ENST00000607805		A6NED7	52 aa		6.37	□□□□□ -1.39
NECAB3-222	ENST00000607805	AHNAK	Q09666	5890 aa	Known RBP	6.37	□□□□□ -1.39
NECAB3-222	ENST00000607805	KRTAP5-8	O75690	187 aa		6.36	□□□□□ -1.39
NECAB3-222	ENST00000607805	MUC5AC	P98088	5654 aa		6.34	□□□□□ -1.39
NECAB3-222	ENST00000607805	KRTAP6-1	Q3LI64	71 aa		6.33	□□□□□ -1.4
NECAB3-222	ENST00000607805	MT1A	P04731	61 aa		6.32	□□□□□ -1.4
NECAB3-222	ENST00000607805	LCE3C	Q5T5A8	94 aa		6.32	□□□□□ -1.4
NECAB3-222	ENST00000607805	KRTAP23-1	A1A580	65 aa		6.28	□□□□□ -1.4
NECAB3-222	ENST00000607805	KRTAP15-1	Q3LI76	137 aa		6.28	□□□□□ -1.4
NECAB3-222	ENST00000607805	RPS28	P62857	69 aa	Known RBP	6.24	□□□□□ -1.41
NECAB3-222	ENST00000607805	CDC42SE1	Q9NRR8	79 aa		6.22	□□□□□ -1.41
NECAB3-222	ENST00000607805	PCP4	P48539	62 aa		6.17	□□□□□ -1.42
NECAB3-222	ENST00000607805	KRTAP9-4	Q9BYQ2	154 aa		6.16	□□□□□ -1.42
NECAB3-222	ENST00000607805	OBSCN	Q5VST9	7968 aa		6.15	□□□□□ -1.42
NECAB3-222	ENST00000607805	ROMO1	P60602	79 aa		6.12	□□□□□ -1.43
NECAB3-222	ENST00000607805	KRTAP6-2	Q3LI66	62 aa		6.11	□□□□□ -1.43
NECAB3-222	ENST00000607805	KRTAP9-6	A8MVA2	160 aa		6.04	□□□□□ -1.44
NECAB3-222	ENST00000607805	KRTAP9-9	Q9BYP9	154 aa		6.04	□□□□□ -1.44
NECAB3-222	ENST00000607805	KRTAP5-1	Q6L8H4	278 aa		5.89	□□□□□ -1.47
NECAB3-222	ENST00000607805	MT3	P25713	68 aa		5.78	□□□□□ -1.48
NECAB3-222	ENST00000607805	BRK1	Q8WUW1	75 aa		5.49	□□□□□ -1.53
NECAB3-222	ENST00000607805	LCE1E	Q5T753	118 aa		5.46	□□□□□ -1.54
NECAB3-222	ENST00000607805	KRTAP4-2	Q9BYR5	136 aa		5.22	□□□□□ -1.57
NECAB3-222	ENST00000607805	PMAIP1	Q13794	54 aa		5.17	□□□□□ -1.58
NECAB3-222	ENST00000607805	LCE1B	Q5T7P3	118 aa		5.1	□□□□□ -1.59
NECAB3-222	ENST00000607805	LCE1C	Q5T751	118 aa		5.07	□□□□□ -1.6
NECAB3-222	ENST00000607805	PRAC1	Q96KF2	57 aa		4.97	□□□□□ -1.61
NECAB3-222	ENST00000607805	KRTAP4-12	Q9BQ66	201 aa		4.84	□□□□□ -1.63
NECAB3-222	ENST00000607805	PRO0628	Q9UI54	55 aa		4.82	□□□□□ -1.64
NECAB3-222	ENST00000607805		H3BS24	57 aa		4.66	□□□□□ -1.66
NECAB3-222	ENST00000607805	KRTAP5-11	Q6L8G4	156 aa		4.66	□□□□□ -1.66
NECAB3-222	ENST00000607805	LCE1F	Q5T754	118 aa		4.61	□□□□□ -1.67
NECAB3-222	ENST00000607805	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.59	□□□□□ -1.67
NECAB3-222	ENST00000607805	KTN1-AS1	Q86SY8	53 aa		4.56	□□□□□ -1.68
NECAB3-222	ENST00000607805		A0A0A0MQY5	61 aa		4.5	□□□□□ -1.69
NECAB3-222	ENST00000607805	LCE3D	Q9BYE3	92 aa		4.43	□□□□□ -1.7
NECAB3-222	ENST00000607805	PHGR1	C9JFL3	82 aa		4.32	□□□□□ -1.72
NECAB3-222	ENST00000607805	LUZP6	Q538Z0	58 aa		4.23	□□□□□ -1.73
NECAB3-222	ENST00000607805	KRTAP21-2	Q3LI59	83 aa		4.21	□□□□□ -1.74
NECAB3-222	ENST00000607805	LCE3E	Q5T5B0	92 aa		4.13	□□□□□ -1.75
NECAB3-222	ENST00000607805	KRTAP4-4	Q9BYR3	166 aa		3.86	□□□□□ -1.79
NECAB3-222	ENST00000607805	MUC19	Q7Z5P9	8384 aa		3.83	□□□□□ -1.8
NECAB3-222	ENST00000607805	NDUFAF8	A1L188	74 aa		3.53	□□□□□ -1.84
NECAB3-222	ENST00000607805	KRTAP21-1	Q3LI58	79 aa		3.29	□□□□□ -1.88
NECAB3-222	ENST00000607805	PRM1	P04553	51 aa		3.13	□□□□□ -1.91
NECAB3-222	ENST00000607805	INE1	O15225	51 aa		3.05	□□□□□ -1.92
NECAB3-222	ENST00000607805	MUC16	Q8WXI7	14507 aa		2.74	□□□□□ -1.97

Retrieved 78 of 20,778 RNA–protein pairs in 82.3 ms