RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 LPAP08519 4548 aa0.93□□□□□ -2.26
LINC00397-202ENST00000606785 MAST4O15021 2626 aa0.93□□□□□ -2.26
LINC00397-202ENST00000606785 DNAH14Q0VDD8 3507 aa0.93□□□□□ -2.26
LINC00397-202ENST00000606785 SPRR2DP22532 72 aa0.92□□□□□ -2.26
LINC00397-202ENST00000606785 SPRR2BP35325 72 aa0.92□□□□□ -2.26
LINC00397-202ENST00000606785 VPS13CQ709C8 3753 aa0.92□□□□□ -2.26
LINC00397-202ENST00000606785 WDFY3Q8IZQ1 3526 aa0.92□□□□□ -2.26
LINC00397-202ENST00000606785 IGSF10Q6WRI0 2623 aa0.91□□□□□ -2.26
LINC00397-202ENST00000606785 DYNC1H1Q14204 4646 aaKnown RBP0.91□□□□□ -2.26
LINC00397-202ENST00000606785 PKHD1P08F94 4074 aa0.9□□□□□ -2.26
LINC00397-202ENST00000606785 SYNE1Q8NF91 8797 aaKnown RBP0.9□□□□□ -2.27
LINC00397-202ENST00000606785 KRTAP6-2Q3LI66 62 aa0.9□□□□□ -2.27
LINC00397-202ENST00000606785 AHNAK2Q8IVF2 5795 aa0.9□□□□□ -2.27
LINC00397-202ENST00000606785 SPRR2AP35326 72 aa0.89□□□□□ -2.27
LINC00397-202ENST00000606785 GPR98Q8WXG9 6306 aa0.89□□□□□ -2.27
LINC00397-202ENST00000606785 KRTAP5-10Q6L8G5 202 aa0.88□□□□□ -2.27
LINC00397-202ENST00000606785 SPRR2FQ96RM1 72 aa0.87□□□□□ -2.27
LINC00397-202ENST00000606785 SPRR2GQ9BYE4 73 aa0.87□□□□□ -2.27
LINC00397-202ENST00000606785 FAT1Q14517 4588 aa0.87□□□□□ -2.27
LINC00397-202ENST00000606785 MT1EP04732 61 aa0.85□□□□□ -2.27
LINC00397-202ENST00000606785 MUC17Q685J3 4493 aa0.84□□□□□ -2.28
LINC00397-202ENST00000606785 KRTAP21-1Q3LI58 79 aa0.83□□□□□ -2.28
LINC00397-202ENST00000606785 SPRR2EP22531 72 aa0.82□□□□□ -2.28
LINC00397-202ENST00000606785 STARD9Q9P2P6 4700 aa0.82□□□□□ -2.28
LINC00397-202ENST00000606785 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
LINC00397-202ENST00000606785 MUC5BQ9HC84 5762 aaPredicted RBP0.81□□□□□ -2.28
LINC00397-202ENST00000606785 MT1LQ93083 61 aa0.81□□□□□ -2.28
LINC00397-202ENST00000606785 CDH23Q9H251 3354 aa0.78□□□□□ -2.28
LINC00397-202ENST00000606785 MT1HP80294 61 aa0.77□□□□□ -2.29
LINC00397-202ENST00000606785 MT1XP80297 61 aa0.76□□□□□ -2.29
LINC00397-202ENST00000606785 KRTAP19-8Q3LI54 63 aa0.76□□□□□ -2.29
LINC00397-202ENST00000606785 LRP1BQ9NZR2 4599 aa0.75□□□□□ -2.29
LINC00397-202ENST00000606785 HERC1Q15751 4861 aa0.75□□□□□ -2.29
LINC00397-202ENST00000606785 KRTAP19-2Q3LHN2 52 aa0.7□□□□□ -2.3
LINC00397-202ENST00000606785 AHNAKQ09666 5890 aaKnown RBP0.69□□□□□ -2.3
LINC00397-202ENST00000606785 LRP2P98164 4655 aa0.69□□□□□ -2.3
LINC00397-202ENST00000606785 KRTAP19-7Q3SYF9 63 aa0.67□□□□□ -2.3
LINC00397-202ENST00000606785 MT1GP13640 62 aa0.65□□□□□ -2.31
LINC00397-202ENST00000606785 MT1BP07438 61 aa0.64□□□□□ -2.31
LINC00397-202ENST00000606785 MACF1Q9UPN3 7388 aaKnown RBP0.63□□□□□ -2.31
LINC00397-202ENST00000606785 MUC2Q02817 5179 aa0.62□□□□□ -2.31
LINC00397-202ENST00000606785 HMCN2Q8NDA2 5059 aa0.59□□□□□ -2.31
LINC00397-202ENST00000606785 MT2AP02795 61 aa0.59□□□□□ -2.31
LINC00397-202ENST00000606785 KRTAP6-1Q3LI64 71 aa0.57□□□□□ -2.32
LINC00397-202ENST00000606785 MT1MQ8N339 61 aa0.57□□□□□ -2.32
LINC00397-202ENST00000606785 FAT4Q6V0I7 4981 aa0.54□□□□□ -2.32
LINC00397-202ENST00000606785 PHGR1C9JFL3 82 aa0.54□□□□□ -2.32
LINC00397-202ENST00000606785 KMT2CQ8NEZ4 4911 aaKnown RBP0.53□□□□□ -2.32
LINC00397-202ENST00000606785 USH2AO75445 5202 aa0.53□□□□□ -2.33
LINC00397-202ENST00000606785 DSTQ03001 7570 aaKnown RBP0.52□□□□□ -2.33
LINC00397-202ENST00000606785 MDN1Q9NU22 5596 aa0.51□□□□□ -2.33
LINC00397-202ENST00000606785 SSPOA2VEC9 5147 aa0.51□□□□□ -2.33
LINC00397-202ENST00000606785 DNHD1Q96M86 4753 aa0.51□□□□□ -2.33
LINC00397-202ENST00000606785 MUC5ACP98088 5654 aa0.51□□□□□ -2.33
LINC00397-202ENST00000606785 MT1FP04733 61 aa0.5□□□□□ -2.33
LINC00397-202ENST00000606785 MT1HL1P0DM35 61 aa0.5□□□□□ -2.33
LINC00397-202ENST00000606785 SYNE2Q8WXH0 6885 aaKnown RBP0.5□□□□□ -2.33
LINC00397-202ENST00000606785 HYDINQ4G0P3 5121 aa0.49□□□□□ -2.33
LINC00397-202ENST00000606785 FSIP2Q5CZC0 6907 aa0.49□□□□□ -2.33
LINC00397-202ENST00000606785 RYR3Q15413 4870 aa0.49□□□□□ -2.33
LINC00397-202ENST00000606785 UBR4Q5T4S7 5183 aa0.48□□□□□ -2.33
LINC00397-202ENST00000606785 HERC2O95714 4834 aa0.48□□□□□ -2.33
LINC00397-202ENST00000606785 PCLOQ9Y6V0 5065 aa0.47□□□□□ -2.33
LINC00397-202ENST00000606785 NEBP20929 6669 aa0.46□□□□□ -2.34
LINC00397-202ENST00000606785 BIRC6Q9NR09 4857 aa0.45□□□□□ -2.34
LINC00397-202ENST00000606785 RYR1P21817 5038 aa0.41□□□□□ -2.34
LINC00397-202ENST00000606785 KMT2DO14686 5537 aa0.4□□□□□ -2.34
LINC00397-202ENST00000606785 KIAA1109Q2LD37 5005 aa0.4□□□□□ -2.35
LINC00397-202ENST00000606785 RNF213Q63HN8 5207 aa0.38□□□□□ -2.35
LINC00397-202ENST00000606785 RYR2Q92736 4967 aa0.31□□□□□ -2.36
LINC00397-202ENST00000606785 KRTAP20-1Q3LI63 56 aa0.3□□□□□ -2.36
LINC00397-202ENST00000606785 EPPK1P58107 5090 aaKnown RBP0.26□□□□□ -2.37
LINC00397-202ENST00000606785 MUC12Q9UKN1 5478 aa0.25□□□□□ -2.37
LINC00397-202ENST00000606785 ABCA13Q86UQ4 5058 aa0.24□□□□□ -2.37
LINC00397-202ENST00000606785 MT4P47944 62 aa0.2□□□□□ -2.38
LINC00397-202ENST00000606785 KRTAP20-2Q3LI61 65 aa0.17□□□□□ -2.38
LINC00397-202ENST00000606785 KRTAP19-6Q3LI70 58 aa0.14□□□□□ -2.39
Retrieved 77 of 20,778 RNA–protein pairs in 78 ms