RNA–Protein interactions for RNA: ENST00000606676.1

SHROOM1-207, Transcript of shroom family member 1, humanhuman

Gene SHROOM1, Length 351 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-207ENST00000606676 MT1LQ93083 61 aa4.57□□□□□ -1.68
SHROOM1-207ENST00000606676 PCP4P48539 62 aa4.53□□□□□ -1.68
SHROOM1-207ENST00000606676 PP632Q6XCG6 107 aa4.52□□□□□ -1.69
SHROOM1-207ENST00000606676 MT1MQ8N339 61 aa4.52□□□□□ -1.69
SHROOM1-207ENST00000606676 DSTQ03001 7570 aaKnown RBP4.51□□□□□ -1.69
SHROOM1-207ENST00000606676 K7ERS5 55 aa4.47□□□□□ -1.69
SHROOM1-207ENST00000606676 KRTAP12-3P60328 96 aa4.46□□□□□ -1.7
SHROOM1-207ENST00000606676 KRTAP25-1Q3LHN0 102 aa4.46□□□□□ -1.7
SHROOM1-207ENST00000606676 RPS28P62857 69 aaKnown RBP4.44□□□□□ -1.7
SHROOM1-207ENST00000606676 KRTAP4-3Q9BYR4 195 aa4.43□□□□□ -1.7
SHROOM1-207ENST00000606676 A6NED7 52 aa4.42□□□□□ -1.7
SHROOM1-207ENST00000606676 KRTAP4-9Q9BYQ8 210 aa4.38□□□□□ -1.71
SHROOM1-207ENST00000606676 KRTAP4-7Q9BYR0 210 aa4.37□□□□□ -1.71
SHROOM1-207ENST00000606676 KRTAP23-1A1A580 65 aa4.31□□□□□ -1.72
SHROOM1-207ENST00000606676 LCE4AQ5TA78 99 aa4.3□□□□□ -1.72
SHROOM1-207ENST00000606676 LCE1DQ5T752 114 aa4.29□□□□□ -1.72
SHROOM1-207ENST00000606676 CDC42SE1Q9NRR8 79 aa4.28□□□□□ -1.72
SHROOM1-207ENST00000606676 KRTAP5-4Q6L8H1 288 aa4.27□□□□□ -1.73
SHROOM1-207ENST00000606676 HMCN1Q96RW7 5635 aa4.26□□□□□ -1.73
SHROOM1-207ENST00000606676 MT4P47944 62 aa4.24□□□□□ -1.73
SHROOM1-207ENST00000606676 ROMO1P60602 79 aa4.23□□□□□ -1.73
SHROOM1-207ENST00000606676 KRTAP19-4Q3LI73 84 aa4.2□□□□□ -1.74
SHROOM1-207ENST00000606676 KRTAP15-1Q3LI76 137 aa4.2□□□□□ -1.74
SHROOM1-207ENST00000606676 KRTAP5-5Q701N2 237 aaPredicted RBP4.16□□□□□ -1.74
SHROOM1-207ENST00000606676 KRTAP4-6Q9BYQ5 205 aa4.16□□□□□ -1.74
SHROOM1-207ENST00000606676 LOC100996750A0A140TA64 210 aa4.13□□□□□ -1.75
SHROOM1-207ENST00000606676 LCE3CQ5T5A8 94 aa4.13□□□□□ -1.75
SHROOM1-207ENST00000606676 GPR98Q8WXG9 6306 aa4.09□□□□□ -1.76
SHROOM1-207ENST00000606676 AHNAK2Q8IVF2 5795 aa4.03□□□□□ -1.76
SHROOM1-207ENST00000606676 KRTAP20-2Q3LI61 65 aa4.01□□□□□ -1.77
SHROOM1-207ENST00000606676 SPRR5A0A1B0GTR4 108 aa4□□□□□ -1.77
SHROOM1-207ENST00000606676 SYNE1Q8NF91 8797 aaKnown RBP3.98□□□□□ -1.77
SHROOM1-207ENST00000606676 KRTAP12-4P60329 112 aa3.98□□□□□ -1.77
SHROOM1-207ENST00000606676 KRTAP5-10Q6L8G5 202 aa3.95□□□□□ -1.78
SHROOM1-207ENST00000606676 KRTAP9-6A8MVA2 160 aa3.93□□□□□ -1.78
SHROOM1-207ENST00000606676 KRTAP5-3Q6L8H2 238 aa3.91□□□□□ -1.78
SHROOM1-207ENST00000606676 MT1AP04731 61 aa3.88□□□□□ -1.79
SHROOM1-207ENST00000606676 BRK1Q8WUW1 75 aa3.88□□□□□ -1.79
SHROOM1-207ENST00000606676 KRTAP6-1Q3LI64 71 aa3.87□□□□□ -1.79
SHROOM1-207ENST00000606676 KRTAP5-7Q6L8G8 165 aa3.76□□□□□ -1.81
SHROOM1-207ENST00000606676 KRTAP5-2Q701N4 177 aa3.76□□□□□ -1.81
SHROOM1-207ENST00000606676 PRO0628Q9UI54 55 aa3.76□□□□□ -1.81
SHROOM1-207ENST00000606676 KRTAP9-4Q9BYQ2 154 aa3.75□□□□□ -1.81
SHROOM1-207ENST00000606676 KRTAP6-2Q3LI66 62 aa3.67□□□□□ -1.82
SHROOM1-207ENST00000606676 PMAIP1Q13794 54 aa3.66□□□□□ -1.82
SHROOM1-207ENST00000606676 KRTAP4-11Q9BYQ6 195 aa3.63□□□□□ -1.83
SHROOM1-207ENST00000606676 MT3P25713 68 aa3.53□□□□□ -1.84
SHROOM1-207ENST00000606676 PRAC1Q96KF2 57 aa3.53□□□□□ -1.84
SHROOM1-207ENST00000606676 KRTAP5-8O75690 187 aa3.52□□□□□ -1.85
SHROOM1-207ENST00000606676 OBSCNQ5VST9 7968 aa3.43□□□□□ -1.86
SHROOM1-207ENST00000606676 KTN1-AS1Q86SY8 53 aa3.42□□□□□ -1.86
SHROOM1-207ENST00000606676 KRTAP5-1Q6L8H4 278 aa3.36□□□□□ -1.87
SHROOM1-207ENST00000606676 MUC5ACP98088 5654 aa3.32□□□□□ -1.88
SHROOM1-207ENST00000606676 MUC5BQ9HC84 5762 aaPredicted RBP3.31□□□□□ -1.88
SHROOM1-207ENST00000606676 KRTAP9-9Q9BYP9 154 aa3.28□□□□□ -1.88
SHROOM1-207ENST00000606676 AHNAKQ09666 5890 aaKnown RBP3.27□□□□□ -1.89
SHROOM1-207ENST00000606676 LCE1EQ5T753 118 aa3.24□□□□□ -1.89
SHROOM1-207ENST00000606676 H3BS24 57 aa3.15□□□□□ -1.91
SHROOM1-207ENST00000606676 KRTAP4-2Q9BYR5 136 aa3.06□□□□□ -1.92
SHROOM1-207ENST00000606676 LCE1BQ5T7P3 118 aa3.02□□□□□ -1.93
SHROOM1-207ENST00000606676 LCE1CQ5T751 118 aa3.01□□□□□ -1.93
SHROOM1-207ENST00000606676 LCE3DQ9BYE3 92 aa2.99□□□□□ -1.93
SHROOM1-207ENST00000606676 LUZP6Q538Z0 58 aa2.92□□□□□ -1.94
SHROOM1-207ENST00000606676 LCE3EQ5T5B0 92 aa2.82□□□□□ -1.96
SHROOM1-207ENST00000606676 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.76□□□□□ -1.97
SHROOM1-207ENST00000606676 A0A0A0MQY5 61 aa2.75□□□□□ -1.97
SHROOM1-207ENST00000606676 KRTAP4-12Q9BQ66 201 aa2.73□□□□□ -1.97
SHROOM1-207ENST00000606676 KRTAP5-11Q6L8G4 156 aa2.71□□□□□ -1.98
SHROOM1-207ENST00000606676 NDUFAF8A1L188 74 aa2.68□□□□□ -1.98
SHROOM1-207ENST00000606676 LCE1FQ5T754 118 aa2.61□□□□□ -1.99
SHROOM1-207ENST00000606676 KRTAP21-2Q3LI59 83 aa2.56□□□□□ -2
SHROOM1-207ENST00000606676 INE1O15225 51 aa2.35□□□□□ -2.03
SHROOM1-207ENST00000606676 PHGR1C9JFL3 82 aa2.34□□□□□ -2.03
SHROOM1-207ENST00000606676 KRTAP4-4Q9BYR3 166 aa2.31□□□□□ -2.04
SHROOM1-207ENST00000606676 PRM1P04553 51 aa2.18□□□□□ -2.06
SHROOM1-207ENST00000606676 MUC19Q7Z5P9 8384 aa2.14□□□□□ -2.07
SHROOM1-207ENST00000606676 KRTAP21-1Q3LI58 79 aa1.71□□□□□ -2.14
SHROOM1-207ENST00000606676 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 67.3 ms