RNA–Protein interactions for RNA: ENST00000605358.5

CCDC12-212, Transcript of coiled-coil domain containing 12, humanhuman

TSL 5

Gene CCDC12, Length 402 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-212ENST00000605358 LCE3AQ5TA76 89 aa6.07□□□□□ -1.44
CCDC12-212ENST00000605358 KRTAP5-3Q6L8H2 238 aa6.04□□□□□ -1.44
CCDC12-212ENST00000605358 H7BZZ5 65 aa6□□□□□ -1.45
CCDC12-212ENST00000605358 SPRR5A0A1B0GTR4 108 aa5.94□□□□□ -1.46
CCDC12-212ENST00000605358 KRTAP20-2Q3LI61 65 aa5.94□□□□□ -1.46
CCDC12-212ENST00000605358 A0A1B0GU69 56 aa5.92□□□□□ -1.46
CCDC12-212ENST00000605358 A8MU10 97 aa5.89□□□□□ -1.47
CCDC12-212ENST00000605358 KRTAP12-3P60328 96 aa5.89□□□□□ -1.47
CCDC12-212ENST00000605358 KRTAP4-7Q9BYR0 210 aa5.88□□□□□ -1.47
CCDC12-212ENST00000605358 KRTAP5-5Q701N2 237 aaPredicted RBP5.87□□□□□ -1.47
CCDC12-212ENST00000605358 KRTAP12-4P60329 112 aa5.85□□□□□ -1.47
CCDC12-212ENST00000605358 ANAPC13Q9BS18 74 aa5.83□□□□□ -1.48
CCDC12-212ENST00000605358 CCDC179H3BU77 68 aa5.73□□□□□ -1.49
CCDC12-212ENST00000605358 KRTAP19-4Q3LI73 84 aa5.72□□□□□ -1.49
CCDC12-212ENST00000605358 ATP5EP56381 51 aaPredicted RBP5.69□□□□□ -1.5
CCDC12-212ENST00000605358 PRR15LQ9BU68 103 aa5.69□□□□□ -1.5
CCDC12-212ENST00000605358 SYNE1Q8NF91 8797 aaKnown RBP5.67□□□□□ -1.5
CCDC12-212ENST00000605358 LOC100996750A0A140TA64 210 aa5.6□□□□□ -1.51
CCDC12-212ENST00000605358 LINC01558Q9Y6Z2 57 aa5.59□□□□□ -1.51
CCDC12-212ENST00000605358 KRTAP25-1Q3LHN0 102 aa5.57□□□□□ -1.52
CCDC12-212ENST00000605358 TMEM258P61165 79 aa5.55□□□□□ -1.52
CCDC12-212ENST00000605358 KRTAP4-11Q9BYQ6 195 aa5.53□□□□□ -1.52
CCDC12-212ENST00000605358 UQCR11O14957 56 aa5.48□□□□□ -1.53
CCDC12-212ENST00000605358 KRTAP5-2Q701N4 177 aa5.45□□□□□ -1.54
CCDC12-212ENST00000605358 KRTAP23-1A1A580 65 aa5.41□□□□□ -1.54
CCDC12-212ENST00000605358 KRTAP15-1Q3LI76 137 aa5.4□□□□□ -1.54
CCDC12-212ENST00000605358 LCE3CQ5T5A8 94 aa5.39□□□□□ -1.55
CCDC12-212ENST00000605358 MT1AP04731 61 aa5.37□□□□□ -1.55
CCDC12-212ENST00000605358 KRTAP5-8O75690 187 aa5.33□□□□□ -1.56
CCDC12-212ENST00000605358 K7ERS5 55 aa5.32□□□□□ -1.56
CCDC12-212ENST00000605358 KRTAP6-1Q3LI64 71 aa5.31□□□□□ -1.56
CCDC12-212ENST00000605358 AHNAKQ09666 5890 aaKnown RBP5.31□□□□□ -1.56
CCDC12-212ENST00000605358 MUC5ACP98088 5654 aa5.29□□□□□ -1.56
CCDC12-212ENST00000605358 MIR22HGQ0VDD5 57 aa5.28□□□□□ -1.56
CCDC12-212ENST00000605358 Q1T7F1 81 aa5.27□□□□□ -1.57
CCDC12-212ENST00000605358 V9GYY9 64 aa5.27□□□□□ -1.57
CCDC12-212ENST00000605358 MUC5BQ9HC84 5762 aaPredicted RBP5.26□□□□□ -1.57
CCDC12-212ENST00000605358 KRTAP9-4Q9BYQ2 154 aa5.23□□□□□ -1.57
CCDC12-212ENST00000605358 KRTAP6-2Q3LI66 62 aa5.15□□□□□ -1.59
CCDC12-212ENST00000605358 KRTAP9-9Q9BYP9 154 aa5.15□□□□□ -1.59
CCDC12-212ENST00000605358 OBSCNQ5VST9 7968 aa5.15□□□□□ -1.59
CCDC12-212ENST00000605358 PSPHP1O15172 72 aa5.13□□□□□ -1.59
CCDC12-212ENST00000605358 RPS28P62857 69 aaKnown RBP5.11□□□□□ -1.59
CCDC12-212ENST00000605358 KRTAP9-6A8MVA2 160 aa5.03□□□□□ -1.6
CCDC12-212ENST00000605358 A6NED7 52 aa4.98□□□□□ -1.61
CCDC12-212ENST00000605358 MT3P25713 68 aa4.95□□□□□ -1.62
CCDC12-212ENST00000605358 CDC42SE1Q9NRR8 79 aa4.95□□□□□ -1.62
CCDC12-212ENST00000605358 PCP4P48539 62 aa4.94□□□□□ -1.62
CCDC12-212ENST00000605358 KRTAP5-1Q6L8H4 278 aa4.94□□□□□ -1.62
CCDC12-212ENST00000605358 ROMO1P60602 79 aa4.83□□□□□ -1.64
CCDC12-212ENST00000605358 LCE1EQ5T753 118 aa4.68□□□□□ -1.66
CCDC12-212ENST00000605358 BRK1Q8WUW1 75 aa4.37□□□□□ -1.71
CCDC12-212ENST00000605358 KRTAP4-2Q9BYR5 136 aa4.37□□□□□ -1.71
CCDC12-212ENST00000605358 LCE1CQ5T751 118 aa4.32□□□□□ -1.72
CCDC12-212ENST00000605358 LCE1BQ5T7P3 118 aa4.32□□□□□ -1.72
CCDC12-212ENST00000605358 PMAIP1Q13794 54 aa4.09□□□□□ -1.75
CCDC12-212ENST00000605358 KRTAP4-12Q9BQ66 201 aa4.02□□□□□ -1.77
CCDC12-212ENST00000605358 LCE1FQ5T754 118 aa3.97□□□□□ -1.77
CCDC12-212ENST00000605358 KRTAP5-11Q6L8G4 156 aa3.93□□□□□ -1.78
CCDC12-212ENST00000605358 PRAC1Q96KF2 57 aa3.91□□□□□ -1.78
CCDC12-212ENST00000605358 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.9□□□□□ -1.79
CCDC12-212ENST00000605358 PRO0628Q9UI54 55 aa3.84□□□□□ -1.79
CCDC12-212ENST00000605358 LCE3DQ9BYE3 92 aa3.83□□□□□ -1.8
CCDC12-212ENST00000605358 PHGR1C9JFL3 82 aa3.65□□□□□ -1.83
CCDC12-212ENST00000605358 KTN1-AS1Q86SY8 53 aa3.64□□□□□ -1.83
CCDC12-212ENST00000605358 SVIPQ8NHG7 77 aa3.62□□□□□ -1.83
CCDC12-212ENST00000605358 LCE3EQ5T5B0 92 aa3.54□□□□□ -1.84
CCDC12-212ENST00000605358 KRTAP21-2Q3LI59 83 aa3.52□□□□□ -1.85
CCDC12-212ENST00000605358 LUZP6Q538Z0 58 aa3.37□□□□□ -1.87
CCDC12-212ENST00000605358 KRTAP4-4Q9BYR3 166 aa3.2□□□□□ -1.9
CCDC12-212ENST00000605358 MUC19Q7Z5P9 8384 aa3.19□□□□□ -1.9
CCDC12-212ENST00000605358 KRTAP21-1Q3LI58 79 aa2.83□□□□□ -1.96
CCDC12-212ENST00000605358 NDUFAF8A1L188 74 aa2.7□□□□□ -1.98
CCDC12-212ENST00000605358 PRM1P04553 51 aa2.43□□□□□ -2.02
CCDC12-212ENST00000605358 MUC16Q8WXI7 14507 aa2.3□□□□□ -2.04
CCDC12-212ENST00000605358 A0A0A0MQY5 61 aa2.2□□□□□ -2.06
CCDC12-212ENST00000605358 INE1O15225 51 aa2.2□□□□□ -2.06
CCDC12-212ENST00000605358 H3BS24 57 aa1.49□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 5.7 ms