RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 LCE4AQ5TA78 99 aa2.16□□□□□ -2.06
COL4A3BP-207ENST00000604926 KRTAP12-4P60329 112 aa2.16□□□□□ -2.06
COL4A3BP-207ENST00000604926 KRTAP5-7Q6L8G8 165 aa2.16□□□□□ -2.06
COL4A3BP-207ENST00000604926 KRTAP4-12Q9BQ66 201 aa2.15□□□□□ -2.07
COL4A3BP-207ENST00000604926 NEBP20929 6669 aa2.14□□□□□ -2.07
COL4A3BP-207ENST00000604926 SYNE2Q8WXH0 6885 aaKnown RBP2.14□□□□□ -2.07
COL4A3BP-207ENST00000604926 GPR98Q8WXG9 6306 aa2.14□□□□□ -2.07
COL4A3BP-207ENST00000604926 MACF1Q9UPN3 7388 aaKnown RBP2.13□□□□□ -2.07
COL4A3BP-207ENST00000604926 KRTAP19-1Q8IUB9 90 aa2.12□□□□□ -2.07
COL4A3BP-207ENST00000604926 LCE3EQ5T5B0 92 aa2.12□□□□□ -2.07
COL4A3BP-207ENST00000604926 KRTAP2-1Q9BYU5 128 aa2.09□□□□□ -2.08
COL4A3BP-207ENST00000604926 KRTAP10-7P60409 375 aaPredicted RBP2.07□□□□□ -2.08
COL4A3BP-207ENST00000604926 KRTAP10-5P60370 271 aa2.06□□□□□ -2.08
COL4A3BP-207ENST00000604926 MT1HP80294 61 aa2.05□□□□□ -2.08
COL4A3BP-207ENST00000604926 KMT2DO14686 5537 aa2.04□□□□□ -2.08
COL4A3BP-207ENST00000604926 MT3P25713 68 aa2.04□□□□□ -2.08
COL4A3BP-207ENST00000604926 DSTQ03001 7570 aaKnown RBP2.04□□□□□ -2.08
COL4A3BP-207ENST00000604926 KRTAP9-3Q9BYQ3 159 aa2.04□□□□□ -2.08
COL4A3BP-207ENST00000604926 USH2AO75445 5202 aa2.03□□□□□ -2.09
COL4A3BP-207ENST00000604926 AHNAKQ09666 5890 aaKnown RBP2.01□□□□□ -2.09
COL4A3BP-207ENST00000604926 KRTAP10-12P60413 245 aa2.01□□□□□ -2.09
COL4A3BP-207ENST00000604926 LCE3DQ9BYE3 92 aa2.01□□□□□ -2.09
COL4A3BP-207ENST00000604926 KRTAP4-11Q9BYQ6 195 aa1.99□□□□□ -2.09
COL4A3BP-207ENST00000604926 LCE3AQ5TA76 89 aa1.97□□□□□ -2.09
COL4A3BP-207ENST00000604926 KRTAP5-10Q6L8G5 202 aa1.96□□□□□ -2.1
COL4A3BP-207ENST00000604926 M0R2T5 61 aa1.94□□□□□ -2.1
COL4A3BP-207ENST00000604926 KRTAP19-8Q3LI54 63 aa1.91□□□□□ -2.1
COL4A3BP-207ENST00000604926 KRTAP4-1Q9BYQ7 146 aa1.91□□□□□ -2.1
COL4A3BP-207ENST00000604926 HMCN1Q96RW7 5635 aa1.88□□□□□ -2.11
COL4A3BP-207ENST00000604926 KRTAP12-3P60328 96 aa1.87□□□□□ -2.11
COL4A3BP-207ENST00000604926 KRTAP8-1Q8IUC2 63 aa1.87□□□□□ -2.11
COL4A3BP-207ENST00000604926 SPRR2GQ9BYE4 73 aa1.87□□□□□ -2.11
COL4A3BP-207ENST00000604926 FCGBPQ9Y6R7 5405 aaPredicted RBP1.85□□□□□ -2.11
COL4A3BP-207ENST00000604926 KRTAP5-4Q6L8H1 288 aa1.85□□□□□ -2.11
COL4A3BP-207ENST00000604926 MDN1Q9NU22 5596 aa1.81□□□□□ -2.12
COL4A3BP-207ENST00000604926 MUC12Q9UKN1 5478 aa1.81□□□□□ -2.12
COL4A3BP-207ENST00000604926 PRM1P04553 51 aa1.8□□□□□ -2.12
COL4A3BP-207ENST00000604926 MT2AP02795 61 aa1.79□□□□□ -2.12
COL4A3BP-207ENST00000604926 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.78□□□□□ -2.12
COL4A3BP-207ENST00000604926 AHNAK2Q8IVF2 5795 aa1.77□□□□□ -2.13
COL4A3BP-207ENST00000604926 OBSCNQ5VST9 7968 aa1.75□□□□□ -2.13
COL4A3BP-207ENST00000604926 SYNE1Q8NF91 8797 aaKnown RBP1.74□□□□□ -2.13
COL4A3BP-207ENST00000604926 KRTAP9-6A8MVA2 160 aa1.74□□□□□ -2.13
COL4A3BP-207ENST00000604926 MT1XP80297 61 aa1.7□□□□□ -2.14
COL4A3BP-207ENST00000604926 MT1FP04733 61 aa1.69□□□□□ -2.14
COL4A3BP-207ENST00000604926 KRTAP19-5Q3LI72 72 aa1.69□□□□□ -2.14
COL4A3BP-207ENST00000604926 MT1BP07438 61 aa1.67□□□□□ -2.14
COL4A3BP-207ENST00000604926 KRTAP5-8O75690 187 aa1.64□□□□□ -2.15
COL4A3BP-207ENST00000604926 MUC19Q7Z5P9 8384 aa1.64□□□□□ -2.15
COL4A3BP-207ENST00000604926 KRTAP5-5Q701N2 237 aaPredicted RBP1.64□□□□□ -2.15
COL4A3BP-207ENST00000604926 KRTAP5-1Q6L8H4 278 aa1.63□□□□□ -2.15
COL4A3BP-207ENST00000604926 KRTAP5-2Q701N4 177 aa1.59□□□□□ -2.15
COL4A3BP-207ENST00000604926 MT1EP04732 61 aa1.57□□□□□ -2.16
COL4A3BP-207ENST00000604926 SPRR2DP22532 72 aa1.57□□□□□ -2.16
COL4A3BP-207ENST00000604926 SPRR2EP22531 72 aa1.55□□□□□ -2.16
COL4A3BP-207ENST00000604926 SPRR2BP35325 72 aa1.55□□□□□ -2.16
COL4A3BP-207ENST00000604926 SPRR2AP35326 72 aa1.55□□□□□ -2.16
COL4A3BP-207ENST00000604926 KRTAP19-7Q3SYF9 63 aa1.54□□□□□ -2.16
COL4A3BP-207ENST00000604926 LCE1CQ5T751 118 aa1.54□□□□□ -2.16
COL4A3BP-207ENST00000604926 LCE1BQ5T7P3 118 aa1.54□□□□□ -2.16
COL4A3BP-207ENST00000604926 MUC5ACP98088 5654 aa1.52□□□□□ -2.17
COL4A3BP-207ENST00000604926 MT1AP04731 61 aa1.5□□□□□ -2.17
COL4A3BP-207ENST00000604926 KRTAP6-2Q3LI66 62 aa1.48□□□□□ -2.17
COL4A3BP-207ENST00000604926 SPRR2FQ96RM1 72 aa1.47□□□□□ -2.17
COL4A3BP-207ENST00000604926 MT1LQ93083 61 aa1.47□□□□□ -2.17
COL4A3BP-207ENST00000604926 KRTAP19-3Q7Z4W3 81 aa1.44□□□□□ -2.18
COL4A3BP-207ENST00000604926 MT1GP13640 62 aa1.44□□□□□ -2.18
COL4A3BP-207ENST00000604926 KRTAP4-4Q9BYR3 166 aa1.42□□□□□ -2.18
COL4A3BP-207ENST00000604926 MT4P47944 62 aa1.42□□□□□ -2.18
COL4A3BP-207ENST00000604926 KRTAP20-2Q3LI61 65 aa1.42□□□□□ -2.18
COL4A3BP-207ENST00000604926 MT1MQ8N339 61 aa1.39□□□□□ -2.19
COL4A3BP-207ENST00000604926 KRTAP5-11Q6L8G4 156 aa1.36□□□□□ -2.19
COL4A3BP-207ENST00000604926 KRTAP4-3Q9BYR4 195 aa1.36□□□□□ -2.19
COL4A3BP-207ENST00000604926 KRTAP21-1Q3LI58 79 aa1.22□□□□□ -2.21
COL4A3BP-207ENST00000604926 KRTAP6-1Q3LI64 71 aa1.19□□□□□ -2.22
COL4A3BP-207ENST00000604926 PHGR1C9JFL3 82 aa0.99□□□□□ -2.25
COL4A3BP-207ENST00000604926 KRTAP21-2Q3LI59 83 aa0.95□□□□□ -2.26
COL4A3BP-207ENST00000604926 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 30.3 ms