RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 KRTAP19-6Q3LI70 58 aa5.4□□□□□ -1.54
PPFIA3-206ENST00000602655 SYNE1Q8NF91 8797 aaKnown RBP5.4□□□□□ -1.54
PPFIA3-206ENST00000602655 CRCT1Q9UGL9 99 aa5.39□□□□□ -1.55
PPFIA3-206ENST00000602655 KRTAP9-6A8MVA2 160 aa5.39□□□□□ -1.55
PPFIA3-206ENST00000602655 SPRR2FQ96RM1 72 aa5.36□□□□□ -1.55
PPFIA3-206ENST00000602655 KRTAP19-7Q3SYF9 63 aa5.33□□□□□ -1.56
PPFIA3-206ENST00000602655 LCE2DQ5TA82 110 aaPredicted RBP5.29□□□□□ -1.56
PPFIA3-206ENST00000602655 KRTAP4-3Q9BYR4 195 aa5.28□□□□□ -1.56
PPFIA3-206ENST00000602655 KRTAP2-3P0C7H8 128 aa5.27□□□□□ -1.57
PPFIA3-206ENST00000602655 KRTAP2-4Q9BYR9 128 aa5.27□□□□□ -1.57
PPFIA3-206ENST00000602655 KRTAP2-1Q9BYU5 128 aa5.27□□□□□ -1.57
PPFIA3-206ENST00000602655 MT1EP04732 61 aa5.2□□□□□ -1.58
PPFIA3-206ENST00000602655 KRTAP12-4P60329 112 aa5.2□□□□□ -1.58
PPFIA3-206ENST00000602655 MT1LQ93083 61 aa5.15□□□□□ -1.59
PPFIA3-206ENST00000602655 LOC100996750A0A140TA64 210 aa5.13□□□□□ -1.59
PPFIA3-206ENST00000602655 MT1GP13640 62 aa5.08□□□□□ -1.6
PPFIA3-206ENST00000602655 KRTAP19-3Q7Z4W3 81 aa4.98□□□□□ -1.61
PPFIA3-206ENST00000602655 SPRR2EP22531 72 aa4.94□□□□□ -1.62
PPFIA3-206ENST00000602655 SPRR2BP35325 72 aa4.94□□□□□ -1.62
PPFIA3-206ENST00000602655 SPRR2AP35326 72 aa4.94□□□□□ -1.62
PPFIA3-206ENST00000602655 MT1MQ8N339 61 aa4.93□□□□□ -1.62
PPFIA3-206ENST00000602655 KRTAP9-6A0A140TA67 174 aa4.92□□□□□ -1.62
PPFIA3-206ENST00000602655 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.84□□□□□ -1.63
PPFIA3-206ENST00000602655 LCE1AQ5T7P2 110 aa4.78□□□□□ -1.64
PPFIA3-206ENST00000602655 LCE5AQ5TCM9 118 aa4.77□□□□□ -1.65
PPFIA3-206ENST00000602655 KRTAP4-9Q9BYQ8 210 aa4.73□□□□□ -1.65
PPFIA3-206ENST00000602655 LCE3BQ5TA77 95 aa4.72□□□□□ -1.65
PPFIA3-206ENST00000602655 SPRR2DP22532 72 aa4.71□□□□□ -1.66
PPFIA3-206ENST00000602655 PRM1P04553 51 aa4.67□□□□□ -1.66
PPFIA3-206ENST00000602655 KRTAP9-7A8MTY7 169 aa4.62□□□□□ -1.67
PPFIA3-206ENST00000602655 KRTAP19-4Q3LI73 84 aa4.61□□□□□ -1.67
PPFIA3-206ENST00000602655 KRTAP5-9P26371 169 aa4.6□□□□□ -1.67
PPFIA3-206ENST00000602655 KRTAP6-3Q3LI67 103 aa4.53□□□□□ -1.68
PPFIA3-206ENST00000602655 LCE3DQ9BYE3 92 aa4.51□□□□□ -1.69
PPFIA3-206ENST00000602655 NEBP20929 6669 aa4.51□□□□□ -1.69
PPFIA3-206ENST00000602655 KRTAP6-1Q3LI64 71 aa4.48□□□□□ -1.69
PPFIA3-206ENST00000602655 LCE3EQ5T5B0 92 aa4.48□□□□□ -1.69
PPFIA3-206ENST00000602655 MT4P47944 62 aa4.38□□□□□ -1.71
PPFIA3-206ENST00000602655 KRTAP5-5Q701N2 237 aaPredicted RBP4.31□□□□□ -1.72
PPFIA3-206ENST00000602655 MT1AP04731 61 aa4.25□□□□□ -1.73
PPFIA3-206ENST00000602655 KRTAP2-2Q9BYT5 123 aa4.23□□□□□ -1.73
PPFIA3-206ENST00000602655 KRTAP6-2Q3LI66 62 aa4.23□□□□□ -1.73
PPFIA3-206ENST00000602655 LCE1EQ5T753 118 aa4.23□□□□□ -1.73
PPFIA3-206ENST00000602655 KRTAP4-6Q9BYQ5 205 aa4.18□□□□□ -1.74
PPFIA3-206ENST00000602655 HMCN1Q96RW7 5635 aa4.12□□□□□ -1.75
PPFIA3-206ENST00000602655 KRTAP9-4Q9BYQ2 154 aa4.05□□□□□ -1.76
PPFIA3-206ENST00000602655 KRTAP20-1Q3LI63 56 aa4.02□□□□□ -1.77
PPFIA3-206ENST00000602655 LCE1DQ5T752 114 aa4□□□□□ -1.77
PPFIA3-206ENST00000602655 MT3P25713 68 aa3.94□□□□□ -1.78
PPFIA3-206ENST00000602655 MUC19Q7Z5P9 8384 aa3.89□□□□□ -1.79
PPFIA3-206ENST00000602655 KRTAP20-2Q3LI61 65 aa3.83□□□□□ -1.8
PPFIA3-206ENST00000602655 KRTAP5-4Q6L8H1 288 aa3.8□□□□□ -1.8
PPFIA3-206ENST00000602655 LCE4AQ5TA78 99 aa3.76□□□□□ -1.81
PPFIA3-206ENST00000602655 LCE1FQ5T754 118 aa3.71□□□□□ -1.82
PPFIA3-206ENST00000602655 MUC5ACP98088 5654 aa3.7□□□□□ -1.82
PPFIA3-206ENST00000602655 LCE1BQ5T7P3 118 aa3.65□□□□□ -1.82
PPFIA3-206ENST00000602655 KRTAP4-11Q9BYQ6 195 aa3.54□□□□□ -1.84
PPFIA3-206ENST00000602655 KRTAP5-3Q6L8H2 238 aa3.51□□□□□ -1.85
PPFIA3-206ENST00000602655 AHNAK2Q8IVF2 5795 aa3.48□□□□□ -1.85
PPFIA3-206ENST00000602655 KRTAP5-2Q701N4 177 aa3.43□□□□□ -1.86
PPFIA3-206ENST00000602655 GPR98Q8WXG9 6306 aa3.37□□□□□ -1.87
PPFIA3-206ENST00000602655 MUC5BQ9HC84 5762 aaPredicted RBP3.36□□□□□ -1.87
PPFIA3-206ENST00000602655 KRTAP5-1Q6L8H4 278 aa3.13□□□□□ -1.91
PPFIA3-206ENST00000602655 KRTAP5-8O75690 187 aa3.12□□□□□ -1.91
PPFIA3-206ENST00000602655 KRTAP4-12Q9BQ66 201 aa3.08□□□□□ -1.92
PPFIA3-206ENST00000602655 KRTAP4-2Q9BYR5 136 aa3.08□□□□□ -1.92
PPFIA3-206ENST00000602655 KRTAP9-9Q9BYP9 154 aa3.07□□□□□ -1.92
PPFIA3-206ENST00000602655 KRTAP4-4Q9BYR3 166 aa3.04□□□□□ -1.92
PPFIA3-206ENST00000602655 KRTAP5-10Q6L8G5 202 aa3.01□□□□□ -1.93
PPFIA3-206ENST00000602655 LCE1CQ5T751 118 aa2.92□□□□□ -1.94
PPFIA3-206ENST00000602655 KRTAP21-2Q3LI59 83 aa2.76□□□□□ -1.97
PPFIA3-206ENST00000602655 KRTAP21-1Q3LI58 79 aa2.73□□□□□ -1.97
PPFIA3-206ENST00000602655 AHNAKQ09666 5890 aaKnown RBP2.63□□□□□ -1.99
PPFIA3-206ENST00000602655 KRTAP5-7Q6L8G8 165 aa2.62□□□□□ -1.99
PPFIA3-206ENST00000602655 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.55□□□□□ -2
PPFIA3-206ENST00000602655 KRTAP5-11Q6L8G4 156 aa2.53□□□□□ -2
PPFIA3-206ENST00000602655 PHGR1C9JFL3 82 aa2.24□□□□□ -2.05
PPFIA3-206ENST00000602655 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 73.3 ms