RNA–Protein interactions for RNA: ENST00000602150.2

SCN1B-205, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 2

Gene SCN1B, Length 3,461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-205ENST00000602150 LCE3CQ5T5A8 94 aa3.96□□□□□ -1.78
SCN1B-205ENST00000602150 KRTAP4-7Q9BYR0 210 aa3.96□□□□□ -1.78
SCN1B-205ENST00000602150 CRCT1Q9UGL9 99 aa3.93□□□□□ -1.78
SCN1B-205ENST00000602150 KRTAP19-7Q3SYF9 63 aa3.91□□□□□ -1.78
SCN1B-205ENST00000602150 KRTAP9-6A8MVA2 160 aa3.89□□□□□ -1.79
SCN1B-205ENST00000602150 SPRR2FQ96RM1 72 aa3.88□□□□□ -1.79
SCN1B-205ENST00000602150 KRTAP2-3P0C7H8 128 aa3.87□□□□□ -1.79
SCN1B-205ENST00000602150 KRTAP2-4Q9BYR9 128 aa3.87□□□□□ -1.79
SCN1B-205ENST00000602150 KRTAP2-1Q9BYU5 128 aa3.87□□□□□ -1.79
SCN1B-205ENST00000602150 MT1EP04732 61 aa3.82□□□□□ -1.8
SCN1B-205ENST00000602150 KRTAP4-3Q9BYR4 195 aa3.82□□□□□ -1.8
SCN1B-205ENST00000602150 SYNE1Q8NF91 8797 aaKnown RBP3.81□□□□□ -1.8
SCN1B-205ENST00000602150 MT1LQ93083 61 aa3.77□□□□□ -1.81
SCN1B-205ENST00000602150 KRTAP9-6A0A140TA67 174 aa3.72□□□□□ -1.81
SCN1B-205ENST00000602150 LOC100996750A0A140TA64 210 aa3.7□□□□□ -1.82
SCN1B-205ENST00000602150 MT1GP13640 62 aa3.66□□□□□ -1.82
SCN1B-205ENST00000602150 KRTAP19-4Q3LI73 84 aa3.64□□□□□ -1.83
SCN1B-205ENST00000602150 KRTAP19-3Q7Z4W3 81 aa3.64□□□□□ -1.83
SCN1B-205ENST00000602150 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.62□□□□□ -1.83
SCN1B-205ENST00000602150 MT1MQ8N339 61 aa3.61□□□□□ -1.83
SCN1B-205ENST00000602150 SPRR2EP22531 72 aa3.61□□□□□ -1.83
SCN1B-205ENST00000602150 SPRR2BP35325 72 aa3.61□□□□□ -1.83
SCN1B-205ENST00000602150 SPRR2AP35326 72 aa3.61□□□□□ -1.83
SCN1B-205ENST00000602150 LCE1AQ5T7P2 110 aa3.53□□□□□ -1.84
SCN1B-205ENST00000602150 LCE5AQ5TCM9 118 aa3.52□□□□□ -1.85
SCN1B-205ENST00000602150 KRTAP9-7A8MTY7 169 aa3.46□□□□□ -1.85
SCN1B-205ENST00000602150 KRTAP5-9P26371 169 aa3.46□□□□□ -1.86
SCN1B-205ENST00000602150 KRTAP12-4P60329 112 aa3.45□□□□□ -1.86
SCN1B-205ENST00000602150 SPRR2DP22532 72 aa3.45□□□□□ -1.86
SCN1B-205ENST00000602150 KRTAP6-3Q3LI67 103 aa3.39□□□□□ -1.87
SCN1B-205ENST00000602150 NEBP20929 6669 aa3.37□□□□□ -1.87
SCN1B-205ENST00000602150 LCE3BQ5TA77 95 aa3.34□□□□□ -1.88
SCN1B-205ENST00000602150 KRTAP6-1Q3LI64 71 aa3.27□□□□□ -1.89
SCN1B-205ENST00000602150 KRTAP4-9Q9BYQ8 210 aa3.26□□□□□ -1.89
SCN1B-205ENST00000602150 MT1AP04731 61 aa3.2□□□□□ -1.9
SCN1B-205ENST00000602150 MT4P47944 62 aa3.17□□□□□ -1.9
SCN1B-205ENST00000602150 KRTAP4-6Q9BYQ5 205 aa3.17□□□□□ -1.9
SCN1B-205ENST00000602150 LCE4AQ5TA78 99 aa3.16□□□□□ -1.9
SCN1B-205ENST00000602150 KRTAP5-5Q701N2 237 aaPredicted RBP3.13□□□□□ -1.91
SCN1B-205ENST00000602150 PRM1P04553 51 aa3.08□□□□□ -1.92
SCN1B-205ENST00000602150 LCE3DQ9BYE3 92 aa3.08□□□□□ -1.92
SCN1B-205ENST00000602150 LCE3EQ5T5B0 92 aa3.07□□□□□ -1.92
SCN1B-205ENST00000602150 HMCN1Q96RW7 5635 aa3.06□□□□□ -1.92
SCN1B-205ENST00000602150 KRTAP20-1Q3LI63 56 aa3.05□□□□□ -1.92
SCN1B-205ENST00000602150 KRTAP6-2Q3LI66 62 aa3.02□□□□□ -1.93
SCN1B-205ENST00000602150 KRTAP9-4Q9BYQ2 154 aa2.96□□□□□ -1.94
SCN1B-205ENST00000602150 MUC19Q7Z5P9 8384 aa2.94□□□□□ -1.94
SCN1B-205ENST00000602150 LCE1DQ5T752 114 aa2.94□□□□□ -1.94
SCN1B-205ENST00000602150 KRTAP2-2Q9BYT5 123 aa2.94□□□□□ -1.94
SCN1B-205ENST00000602150 KRTAP5-4Q6L8H1 288 aa2.87□□□□□ -1.95
SCN1B-205ENST00000602150 MT3P25713 68 aa2.84□□□□□ -1.95
SCN1B-205ENST00000602150 KRTAP20-2Q3LI61 65 aa2.84□□□□□ -1.95
SCN1B-205ENST00000602150 KRTAP9-9Q9BYP9 154 aa2.77□□□□□ -1.97
SCN1B-205ENST00000602150 KRTAP4-12Q9BQ66 201 aa2.74□□□□□ -1.97
SCN1B-205ENST00000602150 LCE1EQ5T753 118 aa2.71□□□□□ -1.98
SCN1B-205ENST00000602150 MUC5ACP98088 5654 aa2.65□□□□□ -1.98
SCN1B-205ENST00000602150 KRTAP5-3Q6L8H2 238 aa2.64□□□□□ -1.99
SCN1B-205ENST00000602150 KRTAP5-2Q701N4 177 aa2.6□□□□□ -1.99
SCN1B-205ENST00000602150 LCE1BQ5T7P3 118 aa2.59□□□□□ -1.99
SCN1B-205ENST00000602150 LCE1FQ5T754 118 aa2.59□□□□□ -2
SCN1B-205ENST00000602150 AHNAK2Q8IVF2 5795 aa2.58□□□□□ -2
SCN1B-205ENST00000602150 GPR98Q8WXG9 6306 aa2.55□□□□□ -2
SCN1B-205ENST00000602150 KRTAP4-2Q9BYR5 136 aa2.49□□□□□ -2.01
SCN1B-205ENST00000602150 KRTAP4-11Q9BYQ6 195 aa2.46□□□□□ -2.02
SCN1B-205ENST00000602150 MUC5BQ9HC84 5762 aaPredicted RBP2.43□□□□□ -2.02
SCN1B-205ENST00000602150 KRTAP5-1Q6L8H4 278 aa2.34□□□□□ -2.04
SCN1B-205ENST00000602150 KRTAP5-8O75690 187 aa2.32□□□□□ -2.04
SCN1B-205ENST00000602150 KRTAP5-10Q6L8G5 202 aa2.26□□□□□ -2.05
SCN1B-205ENST00000602150 LCE1CQ5T751 118 aa2.17□□□□□ -2.06
SCN1B-205ENST00000602150 KRTAP4-4Q9BYR3 166 aa2.15□□□□□ -2.06
SCN1B-205ENST00000602150 KRTAP21-2Q3LI59 83 aa2.04□□□□□ -2.08
SCN1B-205ENST00000602150 KRTAP21-1Q3LI58 79 aa2.03□□□□□ -2.09
SCN1B-205ENST00000602150 KRTAP5-7Q6L8G8 165 aa2.03□□□□□ -2.09
SCN1B-205ENST00000602150 AHNAKQ09666 5890 aaKnown RBP1.94□□□□□ -2.1
SCN1B-205ENST00000602150 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.93□□□□□ -2.1
SCN1B-205ENST00000602150 KRTAP5-11Q6L8G4 156 aa1.9□□□□□ -2.11
SCN1B-205ENST00000602150 PHGR1C9JFL3 82 aa1.67□□□□□ -2.14
SCN1B-205ENST00000602150 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 45.6 ms