RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 MUC12Q9UKN1 5478 aa6.33□□□□□ -1.4
VRK3-225ENST00000601912 LCE3CQ5T5A8 94 aa6.3□□□□□ -1.4
VRK3-225ENST00000601912 MT1GP13640 62 aa6.29□□□□□ -1.4
VRK3-225ENST00000601912 KRTAP9-7A8MTY7 169 aa6.24□□□□□ -1.41
VRK3-225ENST00000601912 LCE1AQ5T7P2 110 aa6.23□□□□□ -1.41
VRK3-225ENST00000601912 LCE5AQ5TCM9 118 aa6.22□□□□□ -1.41
VRK3-225ENST00000601912 SPRR2EP22531 72 aa6.21□□□□□ -1.42
VRK3-225ENST00000601912 SPRR2BP35325 72 aa6.21□□□□□ -1.42
VRK3-225ENST00000601912 SPRR2AP35326 72 aa6.21□□□□□ -1.42
VRK3-225ENST00000601912 SPRR5A0A1B0GTR4 108 aa6.17□□□□□ -1.42
VRK3-225ENST00000601912 MT1MQ8N339 61 aa6.17□□□□□ -1.42
VRK3-225ENST00000601912 KRTAP4-7Q9BYR0 210 aa6.17□□□□□ -1.42
VRK3-225ENST00000601912 MDN1Q9NU22 5596 aa6.13□□□□□ -1.43
VRK3-225ENST00000601912 KRTAP4-3Q9BYR4 195 aa6.02□□□□□ -1.45
VRK3-225ENST00000601912 LUZP6Q538Z0 58 aa6.01□□□□□ -1.45
VRK3-225ENST00000601912 SPRR2DP22532 72 aa5.99□□□□□ -1.45
VRK3-225ENST00000601912 NEBP20929 6669 aa5.95□□□□□ -1.46
VRK3-225ENST00000601912 KRTAP9-6A8MVA2 160 aa5.9□□□□□ -1.47
VRK3-225ENST00000601912 DSTQ03001 7570 aaKnown RBP5.84□□□□□ -1.47
VRK3-225ENST00000601912 LOC100996750A0A140TA64 210 aa5.8□□□□□ -1.48
VRK3-225ENST00000601912 NDUFAF8A1L188 74 aa5.76□□□□□ -1.49
VRK3-225ENST00000601912 LCE3BQ5TA77 95 aa5.75□□□□□ -1.49
VRK3-225ENST00000601912 KRTAP2-3P0C7H8 128 aa5.63□□□□□ -1.51
VRK3-225ENST00000601912 KRTAP2-4Q9BYR9 128 aa5.63□□□□□ -1.51
VRK3-225ENST00000601912 KRTAP5-5Q701N2 237 aaPredicted RBP5.56□□□□□ -1.52
VRK3-225ENST00000601912 KRTAP20-1Q3LI63 56 aa5.55□□□□□ -1.52
VRK3-225ENST00000601912 H3BS24 57 aa5.54□□□□□ -1.52
VRK3-225ENST00000601912 KRTAP2-2Q9BYT5 123 aa5.51□□□□□ -1.53
VRK3-225ENST00000601912 KRTAP2-1Q9BYU5 128 aa5.51□□□□□ -1.53
VRK3-225ENST00000601912 MT1AP04731 61 aa5.46□□□□□ -1.54
VRK3-225ENST00000601912 KRTAP6-1Q3LI64 71 aa5.39□□□□□ -1.55
VRK3-225ENST00000601912 KRTAP5-4Q6L8H1 288 aa5.37□□□□□ -1.55
VRK3-225ENST00000601912 LCE4AQ5TA78 99 aa5.32□□□□□ -1.56
VRK3-225ENST00000601912 A0A0A0MQY5 61 aa5.28□□□□□ -1.56
VRK3-225ENST00000601912 SYNE1Q8NF91 8797 aaKnown RBP5.26□□□□□ -1.57
VRK3-225ENST00000601912 KRTAP12-4P60329 112 aa5.25□□□□□ -1.57
VRK3-225ENST00000601912 KRTAP9-4Q9BYQ2 154 aa5.2□□□□□ -1.58
VRK3-225ENST00000601912 MT4P47944 62 aa5.19□□□□□ -1.58
VRK3-225ENST00000601912 KRTAP4-9Q9BYQ8 210 aa5.15□□□□□ -1.59
VRK3-225ENST00000601912 KRTAP4-6Q9BYQ5 205 aa5.12□□□□□ -1.59
VRK3-225ENST00000601912 LCE1DQ5T752 114 aa5.11□□□□□ -1.59
VRK3-225ENST00000601912 KRTAP20-2Q3LI61 65 aa5.03□□□□□ -1.6
VRK3-225ENST00000601912 KRTAP6-2Q3LI66 62 aa4.99□□□□□ -1.61
VRK3-225ENST00000601912 HMCN1Q96RW7 5635 aa4.98□□□□□ -1.61
VRK3-225ENST00000601912 MT3P25713 68 aa4.97□□□□□ -1.61
VRK3-225ENST00000601912 KRTAP5-2Q701N4 177 aa4.85□□□□□ -1.63
VRK3-225ENST00000601912 INE1O15225 51 aa4.84□□□□□ -1.63
VRK3-225ENST00000601912 KRTAP5-3Q6L8H2 238 aa4.83□□□□□ -1.64
VRK3-225ENST00000601912 LCE3DQ9BYE3 92 aa4.73□□□□□ -1.65
VRK3-225ENST00000601912 LCE3EQ5T5B0 92 aa4.58□□□□□ -1.68
VRK3-225ENST00000601912 OBSCNQ5VST9 7968 aa4.55□□□□□ -1.68
VRK3-225ENST00000601912 AHNAK2Q8IVF2 5795 aa4.44□□□□□ -1.7
VRK3-225ENST00000601912 KRTAP4-11Q9BYQ6 195 aa4.39□□□□□ -1.71
VRK3-225ENST00000601912 LCE1EQ5T753 118 aa4.34□□□□□ -1.71
VRK3-225ENST00000601912 KRTAP5-10Q6L8G5 202 aa4.28□□□□□ -1.72
VRK3-225ENST00000601912 KRTAP5-8O75690 187 aa4.21□□□□□ -1.74
VRK3-225ENST00000601912 KRTAP5-1Q6L8H4 278 aa4.2□□□□□ -1.74
VRK3-225ENST00000601912 GPR98Q8WXG9 6306 aa4.12□□□□□ -1.75
VRK3-225ENST00000601912 LCE1BQ5T7P3 118 aa4.06□□□□□ -1.76
VRK3-225ENST00000601912 KRTAP5-7Q6L8G8 165 aa4.06□□□□□ -1.76
VRK3-225ENST00000601912 LCE1CQ5T751 118 aa4.03□□□□□ -1.76
VRK3-225ENST00000601912 KRTAP4-2Q9BYR5 136 aa4.01□□□□□ -1.77
VRK3-225ENST00000601912 MUC5ACP98088 5654 aa3.98□□□□□ -1.77
VRK3-225ENST00000601912 PRM1P04553 51 aa3.94□□□□□ -1.78
VRK3-225ENST00000601912 KRTAP9-9Q9BYP9 154 aa3.87□□□□□ -1.79
VRK3-225ENST00000601912 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.75□□□□□ -1.81
VRK3-225ENST00000601912 KRTAP5-11Q6L8G4 156 aa3.56□□□□□ -1.84
VRK3-225ENST00000601912 MUC5BQ9HC84 5762 aaPredicted RBP3.56□□□□□ -1.84
VRK3-225ENST00000601912 KRTAP21-2Q3LI59 83 aa3.52□□□□□ -1.85
VRK3-225ENST00000601912 AHNAKQ09666 5890 aaKnown RBP3.37□□□□□ -1.87
VRK3-225ENST00000601912 KRTAP4-12Q9BQ66 201 aa3.36□□□□□ -1.87
VRK3-225ENST00000601912 LCE1FQ5T754 118 aa3.27□□□□□ -1.89
VRK3-225ENST00000601912 KRTAP4-4Q9BYR3 166 aa3.14□□□□□ -1.91
VRK3-225ENST00000601912 PHGR1C9JFL3 82 aa3.06□□□□□ -1.92
VRK3-225ENST00000601912 MUC19Q7Z5P9 8384 aa2.71□□□□□ -1.97
VRK3-225ENST00000601912 KRTAP21-1Q3LI58 79 aa2.37□□□□□ -2.03
VRK3-225ENST00000601912 MUC16Q8WXI7 14507 aa1.97□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 134.9 ms