RNA–Protein interactions for RNA: ENST00000601685.1

CAPN12-211, Transcript of calpain 12, humanhuman

Gene CAPN12, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-211ENST00000601685 LCE2DQ5TA82 110 aaPredicted RBP5.62□□□□□ -1.51
CAPN12-211ENST00000601685 MT1EP04732 61 aa5.6□□□□□ -1.51
CAPN12-211ENST00000601685 FCGBPQ9Y6R7 5405 aaPredicted RBP5.49□□□□□ -1.53
CAPN12-211ENST00000601685 CRCT1Q9UGL9 99 aa5.42□□□□□ -1.54
CAPN12-211ENST00000601685 KRTAP19-6Q3LI70 58 aa5.4□□□□□ -1.55
CAPN12-211ENST00000601685 MACF1Q9UPN3 7388 aaKnown RBP5.37□□□□□ -1.55
CAPN12-211ENST00000601685 LOC100996750A0A140TA64 210 aa5.35□□□□□ -1.55
CAPN12-211ENST00000601685 SYNE2Q8WXH0 6885 aaKnown RBP5.34□□□□□ -1.56
CAPN12-211ENST00000601685 KRTAP4-3Q9BYR4 195 aa5.32□□□□□ -1.56
CAPN12-211ENST00000601685 MT1GP13640 62 aa5.28□□□□□ -1.56
CAPN12-211ENST00000601685 KRTAP9-6A0A140TA67 174 aa5.26□□□□□ -1.57
CAPN12-211ENST00000601685 MUC12Q9UKN1 5478 aa5.25□□□□□ -1.57
CAPN12-211ENST00000601685 KRTAP12-4P60329 112 aa5.22□□□□□ -1.57
CAPN12-211ENST00000601685 MT1MQ8N339 61 aa5.21□□□□□ -1.58
CAPN12-211ENST00000601685 KRTAP19-3Q7Z4W3 81 aa5.19□□□□□ -1.58
CAPN12-211ENST00000601685 DSTQ03001 7570 aaKnown RBP5.11□□□□□ -1.59
CAPN12-211ENST00000601685 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.03□□□□□ -1.6
CAPN12-211ENST00000601685 LCE5AQ5TCM9 118 aa5.01□□□□□ -1.61
CAPN12-211ENST00000601685 SPRR2FQ96RM1 72 aa5□□□□□ -1.61
CAPN12-211ENST00000601685 MDN1Q9NU22 5596 aa4.97□□□□□ -1.61
CAPN12-211ENST00000601685 LCE3BQ5TA77 95 aa4.95□□□□□ -1.62
CAPN12-211ENST00000601685 KRTAP4-9Q9BYQ8 210 aa4.9□□□□□ -1.62
CAPN12-211ENST00000601685 MT1AP04731 61 aa4.9□□□□□ -1.63
CAPN12-211ENST00000601685 KRTAP9-7A8MTY7 169 aa4.82□□□□□ -1.64
CAPN12-211ENST00000601685 KRTAP6-1Q3LI64 71 aa4.79□□□□□ -1.64
CAPN12-211ENST00000601685 LCE3DQ9BYE3 92 aa4.76□□□□□ -1.65
CAPN12-211ENST00000601685 SYNE1Q8NF91 8797 aaKnown RBP4.75□□□□□ -1.65
CAPN12-211ENST00000601685 KRTAP5-9P26371 169 aa4.75□□□□□ -1.65
CAPN12-211ENST00000601685 KRTAP6-3Q3LI67 103 aa4.74□□□□□ -1.65
CAPN12-211ENST00000601685 LCE3EQ5T5B0 92 aa4.74□□□□□ -1.65
CAPN12-211ENST00000601685 KRTAP5-5Q701N2 237 aaPredicted RBP4.7□□□□□ -1.66
CAPN12-211ENST00000601685 SPRR2EP22531 72 aa4.67□□□□□ -1.66
CAPN12-211ENST00000601685 SPRR2BP35325 72 aa4.67□□□□□ -1.66
CAPN12-211ENST00000601685 SPRR2AP35326 72 aa4.67□□□□□ -1.66
CAPN12-211ENST00000601685 PRM1P04553 51 aa4.66□□□□□ -1.66
CAPN12-211ENST00000601685 LCE1AQ5T7P2 110 aa4.66□□□□□ -1.66
CAPN12-211ENST00000601685 NEBP20929 6669 aa4.6□□□□□ -1.67
CAPN12-211ENST00000601685 SPRR2DP22532 72 aa4.48□□□□□ -1.69
CAPN12-211ENST00000601685 KRTAP6-2Q3LI66 62 aa4.44□□□□□ -1.7
CAPN12-211ENST00000601685 KRTAP9-4Q9BYQ2 154 aa4.43□□□□□ -1.7
CAPN12-211ENST00000601685 OBSCNQ5VST9 7968 aa4.35□□□□□ -1.71
CAPN12-211ENST00000601685 MT3P25713 68 aa4.23□□□□□ -1.73
CAPN12-211ENST00000601685 KRTAP20-1Q3LI63 56 aa4.21□□□□□ -1.74
CAPN12-211ENST00000601685 KRTAP2-2Q9BYT5 123 aa4.14□□□□□ -1.75
CAPN12-211ENST00000601685 MT4P47944 62 aa4.02□□□□□ -1.77
CAPN12-211ENST00000601685 KRTAP5-4Q6L8H1 288 aa3.97□□□□□ -1.77
CAPN12-211ENST00000601685 KRTAP4-6Q9BYQ5 205 aa3.96□□□□□ -1.78
CAPN12-211ENST00000601685 HMCN1Q96RW7 5635 aa3.92□□□□□ -1.78
CAPN12-211ENST00000601685 LCE1DQ5T752 114 aa3.9□□□□□ -1.79
CAPN12-211ENST00000601685 LCE4AQ5TA78 99 aa3.83□□□□□ -1.8
CAPN12-211ENST00000601685 KRTAP20-2Q3LI61 65 aa3.75□□□□□ -1.81
CAPN12-211ENST00000601685 KRTAP5-2Q701N4 177 aa3.72□□□□□ -1.81
CAPN12-211ENST00000601685 MUC5ACP98088 5654 aa3.59□□□□□ -1.84
CAPN12-211ENST00000601685 KRTAP5-3Q6L8H2 238 aa3.58□□□□□ -1.84
CAPN12-211ENST00000601685 LCE1EQ5T753 118 aa3.51□□□□□ -1.85
CAPN12-211ENST00000601685 KRTAP4-11Q9BYQ6 195 aa3.48□□□□□ -1.85
CAPN12-211ENST00000601685 KRTAP5-10Q6L8G5 202 aa3.46□□□□□ -1.86
CAPN12-211ENST00000601685 AHNAK2Q8IVF2 5795 aa3.45□□□□□ -1.86
CAPN12-211ENST00000601685 LCE1BQ5T7P3 118 aa3.42□□□□□ -1.86
CAPN12-211ENST00000601685 KRTAP5-1Q6L8H4 278 aa3.38□□□□□ -1.87
CAPN12-211ENST00000601685 GPR98Q8WXG9 6306 aa3.37□□□□□ -1.87
CAPN12-211ENST00000601685 KRTAP4-2Q9BYR5 136 aa3.24□□□□□ -1.89
CAPN12-211ENST00000601685 LCE1CQ5T751 118 aa3.21□□□□□ -1.9
CAPN12-211ENST00000601685 KRTAP5-8O75690 187 aa3.17□□□□□ -1.9
CAPN12-211ENST00000601685 LCE1FQ5T754 118 aa3.13□□□□□ -1.91
CAPN12-211ENST00000601685 KRTAP21-2Q3LI59 83 aa3.08□□□□□ -1.92
CAPN12-211ENST00000601685 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.05□□□□□ -1.92
CAPN12-211ENST00000601685 KRTAP21-1Q3LI58 79 aa2.98□□□□□ -1.93
CAPN12-211ENST00000601685 KRTAP5-7Q6L8G8 165 aa2.98□□□□□ -1.93
CAPN12-211ENST00000601685 MUC5BQ9HC84 5762 aaPredicted RBP2.98□□□□□ -1.93
CAPN12-211ENST00000601685 KRTAP9-9Q9BYP9 154 aa2.87□□□□□ -1.95
CAPN12-211ENST00000601685 KRTAP4-4Q9BYR3 166 aa2.83□□□□□ -1.96
CAPN12-211ENST00000601685 KRTAP5-11Q6L8G4 156 aa2.75□□□□□ -1.97
CAPN12-211ENST00000601685 MUC19Q7Z5P9 8384 aa2.74□□□□□ -1.97
CAPN12-211ENST00000601685 AHNAKQ09666 5890 aaKnown RBP2.72□□□□□ -1.97
CAPN12-211ENST00000601685 KRTAP4-12Q9BQ66 201 aa2.69□□□□□ -1.98
CAPN12-211ENST00000601685 PHGR1C9JFL3 82 aa2.39□□□□□ -2.03
CAPN12-211ENST00000601685 MUC16Q8WXI7 14507 aa1.63□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 237.4 ms