RNA–Protein interactions for RNA: ENST00000601252.1

TIMM50-215, Transcript of translocase of inner mitochondrial membrane 50, human

TSL 5

Gene TIMM50, Length 1,737 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TIMM50-215	ENST00000601252	KRTAP4-8	Q9BYQ9	185 aa		5.26	□□□□□ -1.57
TIMM50-215	ENST00000601252	NEB	P20929	6669 aa		5.2	□□□□□ -1.58
TIMM50-215	ENST00000601252	LCE3C	Q5T5A8	94 aa		5.2	□□□□□ -1.58
TIMM50-215	ENST00000601252	KRTAP19-7	Q3SYF9	63 aa		5.17	□□□□□ -1.58
TIMM50-215	ENST00000601252	KMT2D	O14686	5537 aa		5.14	□□□□□ -1.59
TIMM50-215	ENST00000601252	MT1E	P04732	61 aa		5.06	□□□□□ -1.6
TIMM50-215	ENST00000601252	KRTAP20-1	Q3LI63	56 aa		5.06	□□□□□ -1.6
TIMM50-215	ENST00000601252	MUC12	Q9UKN1	5478 aa		5.05	□□□□□ -1.6
TIMM50-215	ENST00000601252	MT1L	Q93083	61 aa		5	□□□□□ -1.61
TIMM50-215	ENST00000601252	KRTAP5-9	P26371	169 aa		4.94	□□□□□ -1.62
TIMM50-215	ENST00000601252	MDN1	Q9NU22	5596 aa		4.91	□□□□□ -1.62
TIMM50-215	ENST00000601252	KRTAP4-7	Q9BYR0	210 aa		4.83	□□□□□ -1.64
TIMM50-215	ENST00000601252	KRTAP9-6	A8MVA2	160 aa		4.83	□□□□□ -1.64
TIMM50-215	ENST00000601252	KRTAP2-3	P0C7H8	128 aa		4.83	□□□□□ -1.64
TIMM50-215	ENST00000601252	KRTAP19-3	Q7Z4W3	81 aa		4.83	□□□□□ -1.64
TIMM50-215	ENST00000601252	KRTAP2-4	Q9BYR9	128 aa		4.83	□□□□□ -1.64
TIMM50-215	ENST00000601252	MT1G	P13640	62 aa		4.8	□□□□□ -1.64
TIMM50-215	ENST00000601252	SPRR2F	Q96RM1	72 aa		4.79	□□□□□ -1.64
TIMM50-215	ENST00000601252	KRTAP2-1	Q9BYU5	128 aa		4.77	□□□□□ -1.65
TIMM50-215	ENST00000601252	MT1M	Q8N339	61 aa		4.75	□□□□□ -1.65
TIMM50-215	ENST00000601252	LCE5A	Q5TCM9	118 aa		4.71	□□□□□ -1.66
TIMM50-215	ENST00000601252	SPRR2E	P22531	72 aa		4.69	□□□□□ -1.66
TIMM50-215	ENST00000601252	SPRR2B	P35325	72 aa		4.69	□□□□□ -1.66
TIMM50-215	ENST00000601252	SPRR2A	P35326	72 aa		4.69	□□□□□ -1.66
TIMM50-215	ENST00000601252	LCE1A	Q5T7P2	110 aa		4.69	□□□□□ -1.66
TIMM50-215	ENST00000601252	KRTAP2-2	Q9BYT5	123 aa		4.65	□□□□□ -1.67
TIMM50-215	ENST00000601252	KRTAP4-3	Q9BYR4	195 aa		4.63	□□□□□ -1.67
TIMM50-215	ENST00000601252	SPRR2D	P22532	72 aa		4.54	□□□□□ -1.68
TIMM50-215	ENST00000601252	LOC100996750	A0A140TA64	210 aa		4.53	□□□□□ -1.68
TIMM50-215	ENST00000601252	KRTAP4-6	Q9BYQ5	205 aa		4.52	□□□□□ -1.69
TIMM50-215	ENST00000601252	GPR98	Q8WXG9	6306 aa		4.47	□□□□□ -1.69
TIMM50-215	ENST00000601252	LCE3B	Q5TA77	95 aa		4.44	□□□□□ -1.7
TIMM50-215	ENST00000601252	DST	Q03001	7570 aa	Known RBP	4.4	□□□□□ -1.71
TIMM50-215	ENST00000601252	KRTAP9-4	Q9BYQ2	154 aa		4.27	□□□□□ -1.73
TIMM50-215	ENST00000601252	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.26	□□□□□ -1.73
TIMM50-215	ENST00000601252	MT1A	P04731	61 aa		4.26	□□□□□ -1.73
TIMM50-215	ENST00000601252	KRTAP4-9	Q9BYQ8	210 aa		4.26	□□□□□ -1.73
TIMM50-215	ENST00000601252	KRTAP4-12	Q9BQ66	201 aa		4.24	□□□□□ -1.73
TIMM50-215	ENST00000601252	KRTAP6-1	Q3LI64	71 aa		4.2	□□□□□ -1.74
TIMM50-215	ENST00000601252	KRTAP9-9	Q9BYP9	154 aa		4.15	□□□□□ -1.74
TIMM50-215	ENST00000601252	KRTAP12-4	P60329	112 aa		4.15	□□□□□ -1.75
TIMM50-215	ENST00000601252	LCE4A	Q5TA78	99 aa		4.14	□□□□□ -1.75
TIMM50-215	ENST00000601252	LCE1D	Q5T752	114 aa		4.09	□□□□□ -1.75
TIMM50-215	ENST00000601252	KRTAP5-4	Q6L8H1	288 aa		4.02	□□□□□ -1.77
TIMM50-215	ENST00000601252	MT4	P47944	62 aa		4.01	□□□□□ -1.77
TIMM50-215	ENST00000601252	HMCN1	Q96RW7	5635 aa		4.01	□□□□□ -1.77
TIMM50-215	ENST00000601252	LCE3D	Q9BYE3	92 aa		4	□□□□□ -1.77
TIMM50-215	ENST00000601252	SYNE1	Q8NF91	8797 aa	Known RBP	3.99	□□□□□ -1.77
TIMM50-215	ENST00000601252	AHNAK2	Q8IVF2	5795 aa		3.98	□□□□□ -1.77
TIMM50-215	ENST00000601252	KRTAP5-10	Q6L8G5	202 aa		3.97	□□□□□ -1.77
TIMM50-215	ENST00000601252	LCE3E	Q5T5B0	92 aa		3.95	□□□□□ -1.78
TIMM50-215	ENST00000601252	KRTAP5-7	Q6L8G8	165 aa		3.85	□□□□□ -1.79
TIMM50-215	ENST00000601252	MT3	P25713	68 aa		3.84	□□□□□ -1.79
TIMM50-215	ENST00000601252	KRTAP6-2	Q3LI66	62 aa		3.82	□□□□□ -1.8
TIMM50-215	ENST00000601252	KRTAP5-3	Q6L8H2	238 aa		3.8	□□□□□ -1.8
TIMM50-215	ENST00000601252	KRTAP20-2	Q3LI61	65 aa		3.76	□□□□□ -1.81
TIMM50-215	ENST00000601252	KRTAP5-2	Q701N4	177 aa		3.65	□□□□□ -1.82
TIMM50-215	ENST00000601252	PRM1	P04553	51 aa		3.63	□□□□□ -1.83
TIMM50-215	ENST00000601252	KRTAP4-11	Q9BYQ6	195 aa		3.61	□□□□□ -1.83
TIMM50-215	ENST00000601252	LCE1F	Q5T754	118 aa		3.56	□□□□□ -1.84
TIMM50-215	ENST00000601252	KRTAP4-2	Q9BYR5	136 aa		3.53	□□□□□ -1.84
TIMM50-215	ENST00000601252	OBSCN	Q5VST9	7968 aa		3.44	□□□□□ -1.86
TIMM50-215	ENST00000601252	AHNAK	Q09666	5890 aa	Known RBP	3.38	□□□□□ -1.87
TIMM50-215	ENST00000601252	MUC5AC	P98088	5654 aa		3.37	□□□□□ -1.87
TIMM50-215	ENST00000601252	KRTAP5-8	O75690	187 aa		3.33	□□□□□ -1.88
TIMM50-215	ENST00000601252	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.3	□□□□□ -1.88
TIMM50-215	ENST00000601252	LCE1E	Q5T753	118 aa		3.28	□□□□□ -1.88
TIMM50-215	ENST00000601252	KRTAP5-1	Q6L8H4	278 aa		3.17	□□□□□ -1.9
TIMM50-215	ENST00000601252	LCE1C	Q5T751	118 aa		3.06	□□□□□ -1.92
TIMM50-215	ENST00000601252	LCE1B	Q5T7P3	118 aa		3.06	□□□□□ -1.92
TIMM50-215	ENST00000601252	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.9	□□□□□ -1.94
TIMM50-215	ENST00000601252	KRTAP21-2	Q3LI59	83 aa		2.74	□□□□□ -1.97
TIMM50-215	ENST00000601252	KRTAP5-11	Q6L8G4	156 aa		2.7	□□□□□ -1.98
TIMM50-215	ENST00000601252	KRTAP21-1	Q3LI58	79 aa		2.42	□□□□□ -2.02
TIMM50-215	ENST00000601252	KRTAP4-4	Q9BYR3	166 aa		2.39	□□□□□ -2.03
TIMM50-215	ENST00000601252	PHGR1	C9JFL3	82 aa		2.34	□□□□□ -2.04
TIMM50-215	ENST00000601252	MUC19	Q7Z5P9	8384 aa		2.06	□□□□□ -2.08
TIMM50-215	ENST00000601252	MUC16	Q8WXI7	14507 aa		1.51	□□□□□ -2.17

Retrieved 78 of 20,778 RNA–protein pairs in 113.4 ms