RNA–Protein interactions for RNA: ENST00000600995.5

GTPBP3-223, Transcript of GTP binding protein 3, mitochondrial, human

TSL 2

Gene GTPBP3, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GTPBP3-223	ENST00000600995	PCP4	P48539	62 aa		7.3	□□□□□ -1.24
GTPBP3-223	ENST00000600995	RPS28	P62857	69 aa	Known RBP	7.3	□□□□□ -1.24
GTPBP3-223	ENST00000600995	PP632	Q6XCG6	107 aa		7.28	□□□□□ -1.24
GTPBP3-223	ENST00000600995	MT1L	Q93083	61 aa		7.24	□□□□□ -1.25
GTPBP3-223	ENST00000600995	KRTAP25-1	Q3LHN0	102 aa		7.23	□□□□□ -1.25
GTPBP3-223	ENST00000600995		A6NED7	52 aa		7.21	□□□□□ -1.26
GTPBP3-223	ENST00000600995	DST	Q03001	7570 aa	Known RBP	7.17	□□□□□ -1.26
GTPBP3-223	ENST00000600995	MT1M	Q8N339	61 aa		7.16	□□□□□ -1.26
GTPBP3-223	ENST00000600995	KRTAP12-3	P60328	96 aa		7.13	□□□□□ -1.27
GTPBP3-223	ENST00000600995	KRTAP23-1	A1A580	65 aa		7.02	□□□□□ -1.29
GTPBP3-223	ENST00000600995	CDC42SE1	Q9NRR8	79 aa		6.97	□□□□□ -1.29
GTPBP3-223	ENST00000600995	KRTAP4-3	Q9BYR4	195 aa		6.92	□□□□□ -1.3
GTPBP3-223	ENST00000600995	KRTAP19-4	Q3LI73	84 aa		6.88	□□□□□ -1.31
GTPBP3-223	ENST00000600995	ROMO1	P60602	79 aa		6.86	□□□□□ -1.31
GTPBP3-223	ENST00000600995	LCE4A	Q5TA78	99 aa		6.85	□□□□□ -1.31
GTPBP3-223	ENST00000600995	KRTAP4-9	Q9BYQ8	210 aa		6.84	□□□□□ -1.31
GTPBP3-223	ENST00000600995	KRTAP4-7	Q9BYR0	210 aa		6.83	□□□□□ -1.32
GTPBP3-223	ENST00000600995	KRTAP15-1	Q3LI76	137 aa		6.75	□□□□□ -1.33
GTPBP3-223	ENST00000600995	KRTAP5-4	Q6L8H1	288 aa		6.74	□□□□□ -1.33
GTPBP3-223	ENST00000600995	LCE1D	Q5T752	114 aa		6.73	□□□□□ -1.33
GTPBP3-223	ENST00000600995	MT4	P47944	62 aa		6.66	□□□□□ -1.34
GTPBP3-223	ENST00000600995	LCE3C	Q5T5A8	94 aa		6.6	□□□□□ -1.35
GTPBP3-223	ENST00000600995	KRTAP5-5	Q701N2	237 aa	Predicted RBP	6.56	□□□□□ -1.36
GTPBP3-223	ENST00000600995	HMCN1	Q96RW7	5635 aa		6.53	□□□□□ -1.36
GTPBP3-223	ENST00000600995	KRTAP4-6	Q9BYQ5	205 aa		6.51	□□□□□ -1.37
GTPBP3-223	ENST00000600995	LOC100996750	A0A140TA64	210 aa		6.47	□□□□□ -1.37
GTPBP3-223	ENST00000600995	KRTAP12-4	P60329	112 aa		6.37	□□□□□ -1.39
GTPBP3-223	ENST00000600995	SPRR5	A0A1B0GTR4	108 aa		6.36	□□□□□ -1.39
GTPBP3-223	ENST00000600995	BRK1	Q8WUW1	75 aa		6.36	□□□□□ -1.39
GTPBP3-223	ENST00000600995	GPR98	Q8WXG9	6306 aa		6.36	□□□□□ -1.39
GTPBP3-223	ENST00000600995	KRTAP20-2	Q3LI61	65 aa		6.32	□□□□□ -1.4
GTPBP3-223	ENST00000600995	SYNE1	Q8NF91	8797 aa	Known RBP	6.22	□□□□□ -1.41
GTPBP3-223	ENST00000600995	AHNAK2	Q8IVF2	5795 aa		6.21	□□□□□ -1.42
GTPBP3-223	ENST00000600995	KRTAP9-6	A8MVA2	160 aa		6.17	□□□□□ -1.42
GTPBP3-223	ENST00000600995	MT1A	P04731	61 aa		6.17	□□□□□ -1.42
GTPBP3-223	ENST00000600995	KRTAP5-10	Q6L8G5	202 aa		6.17	□□□□□ -1.42
GTPBP3-223	ENST00000600995	KRTAP5-3	Q6L8H2	238 aa		6.14	□□□□□ -1.43
GTPBP3-223	ENST00000600995	KRTAP6-1	Q3LI64	71 aa		6.09	□□□□□ -1.43
GTPBP3-223	ENST00000600995	PMAIP1	Q13794	54 aa		6.02	□□□□□ -1.45
GTPBP3-223	ENST00000600995	KRTAP9-4	Q9BYQ2	154 aa		5.96	□□□□□ -1.46
GTPBP3-223	ENST00000600995	KRTAP5-2	Q701N4	177 aa		5.94	□□□□□ -1.46
GTPBP3-223	ENST00000600995	KRTAP5-7	Q6L8G8	165 aa		5.92	□□□□□ -1.46
GTPBP3-223	ENST00000600995	KRTAP6-2	Q3LI66	62 aa		5.79	□□□□□ -1.48
GTPBP3-223	ENST00000600995	KRTAP4-11	Q9BYQ6	195 aa		5.74	□□□□□ -1.49
GTPBP3-223	ENST00000600995	PRO0628	Q9UI54	55 aa		5.71	□□□□□ -1.5
GTPBP3-223	ENST00000600995	PRAC1	Q96KF2	57 aa		5.69	□□□□□ -1.5
GTPBP3-223	ENST00000600995	MT3	P25713	68 aa		5.66	□□□□□ -1.5
GTPBP3-223	ENST00000600995	KRTAP5-8	O75690	187 aa		5.54	□□□□□ -1.52
GTPBP3-223	ENST00000600995	OBSCN	Q5VST9	7968 aa		5.42	□□□□□ -1.54
GTPBP3-223	ENST00000600995	KTN1-AS1	Q86SY8	53 aa		5.42	□□□□□ -1.54
GTPBP3-223	ENST00000600995	KRTAP5-1	Q6L8H4	278 aa		5.28	□□□□□ -1.56
GTPBP3-223	ENST00000600995	KRTAP9-9	Q9BYP9	154 aa		5.23	□□□□□ -1.57
GTPBP3-223	ENST00000600995	LCE1E	Q5T753	118 aa		5.18	□□□□□ -1.58
GTPBP3-223	ENST00000600995	SVIP	Q8NHG7	77 aa		5.14	□□□□□ -1.59
GTPBP3-223	ENST00000600995	MUC5B	Q9HC84	5762 aa	Predicted RBP	5.07	□□□□□ -1.6
GTPBP3-223	ENST00000600995	MUC5AC	P98088	5654 aa		5.06	□□□□□ -1.6
GTPBP3-223	ENST00000600995	AHNAK	Q09666	5890 aa	Known RBP	5	□□□□□ -1.61
GTPBP3-223	ENST00000600995	LUZP6	Q538Z0	58 aa		4.88	□□□□□ -1.63
GTPBP3-223	ENST00000600995	KRTAP4-2	Q9BYR5	136 aa		4.82	□□□□□ -1.64
GTPBP3-223	ENST00000600995	LCE3D	Q9BYE3	92 aa		4.8	□□□□□ -1.64
GTPBP3-223	ENST00000600995	LCE1C	Q5T751	118 aa		4.79	□□□□□ -1.64
GTPBP3-223	ENST00000600995	LCE1B	Q5T7P3	118 aa		4.79	□□□□□ -1.64
GTPBP3-223	ENST00000600995	LCE3E	Q5T5B0	92 aa		4.56	□□□□□ -1.68
GTPBP3-223	ENST00000600995	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.4	□□□□□ -1.71
GTPBP3-223	ENST00000600995	KRTAP5-11	Q6L8G4	156 aa		4.31	□□□□□ -1.72
GTPBP3-223	ENST00000600995	KRTAP4-12	Q9BQ66	201 aa		4.25	□□□□□ -1.73
GTPBP3-223	ENST00000600995	LCE1F	Q5T754	118 aa		4.19	□□□□□ -1.74
GTPBP3-223	ENST00000600995	KRTAP21-2	Q3LI59	83 aa		4.03	□□□□□ -1.76
GTPBP3-223	ENST00000600995	NDUFAF8	A1L188	74 aa		3.98	□□□□□ -1.77
GTPBP3-223	ENST00000600995	PHGR1	C9JFL3	82 aa		3.71	□□□□□ -1.82
GTPBP3-223	ENST00000600995	KRTAP4-4	Q9BYR3	166 aa		3.6	□□□□□ -1.83
GTPBP3-223	ENST00000600995	PRM1	P04553	51 aa		3.49	□□□□□ -1.85
GTPBP3-223	ENST00000600995	MUC19	Q7Z5P9	8384 aa		3.33	□□□□□ -1.88
GTPBP3-223	ENST00000600995	INE1	O15225	51 aa		3.3	□□□□□ -1.88
GTPBP3-223	ENST00000600995		A0A0A0MQY5	61 aa		3.26	□□□□□ -1.89
GTPBP3-223	ENST00000600995	KRTAP21-1	Q3LI58	79 aa		2.74	□□□□□ -1.97
GTPBP3-223	ENST00000600995	MUC16	Q8WXI7	14507 aa		2.4	□□□□□ -2.02
GTPBP3-223	ENST00000600995		H3BS24	57 aa		2.09	□□□□□ -2.07

Retrieved 78 of 20,778 RNA–protein pairs in 111.1 ms