RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 SPRR2FQ96RM1 72 aa6.29□□□□□ -1.4
SHKBP1-224ENST00000600718 KRTAP19-4Q3LI73 84 aa6.28□□□□□ -1.4
SHKBP1-224ENST00000600718 MT1LQ93083 61 aa6.28□□□□□ -1.4
SHKBP1-224ENST00000600718 KRTAP5-9P26371 169 aa6.24□□□□□ -1.41
SHKBP1-224ENST00000600718 LCE3CQ5T5A8 94 aa6.21□□□□□ -1.42
SHKBP1-224ENST00000600718 KRTAP19-3Q7Z4W3 81 aa6.17□□□□□ -1.42
SHKBP1-224ENST00000600718 KRTAP6-3Q3LI67 103 aa6.16□□□□□ -1.42
SHKBP1-224ENST00000600718 KRTAP9-7A8MTY7 169 aa6.15□□□□□ -1.42
SHKBP1-224ENST00000600718 MT1GP13640 62 aa6.13□□□□□ -1.43
SHKBP1-224ENST00000600718 SYNE2Q8WXH0 6885 aaKnown RBP6.12□□□□□ -1.43
SHKBP1-224ENST00000600718 LCE5AQ5TCM9 118 aa6.07□□□□□ -1.44
SHKBP1-224ENST00000600718 KRTAP4-7Q9BYR0 210 aa6.06□□□□□ -1.44
SHKBP1-224ENST00000600718 MUC12Q9UKN1 5478 aa6.05□□□□□ -1.44
SHKBP1-224ENST00000600718 MT1MQ8N339 61 aa6.04□□□□□ -1.44
SHKBP1-224ENST00000600718 LCE1AQ5T7P2 110 aa6.03□□□□□ -1.44
SHKBP1-224ENST00000600718 SPRR2EP22531 72 aa5.98□□□□□ -1.45
SHKBP1-224ENST00000600718 SPRR2BP35325 72 aa5.98□□□□□ -1.45
SHKBP1-224ENST00000600718 SPRR2AP35326 72 aa5.98□□□□□ -1.45
SHKBP1-224ENST00000600718 KRTAP4-3Q9BYR4 195 aa5.9□□□□□ -1.46
SHKBP1-224ENST00000600718 MDN1Q9NU22 5596 aa5.84□□□□□ -1.48
SHKBP1-224ENST00000600718 KRTAP9-6A8MVA2 160 aa5.84□□□□□ -1.48
SHKBP1-224ENST00000600718 SPRR2DP22532 72 aa5.77□□□□□ -1.49
SHKBP1-224ENST00000600718 LOC100996750A0A140TA64 210 aa5.69□□□□□ -1.5
SHKBP1-224ENST00000600718 NEBP20929 6669 aa5.68□□□□□ -1.5
SHKBP1-224ENST00000600718 KRTAP2-3P0C7H8 128 aa5.55□□□□□ -1.52
SHKBP1-224ENST00000600718 KRTAP2-4Q9BYR9 128 aa5.55□□□□□ -1.52
SHKBP1-224ENST00000600718 KRTAP2-1Q9BYU5 128 aa5.55□□□□□ -1.52
SHKBP1-224ENST00000600718 LCE3BQ5TA77 95 aa5.55□□□□□ -1.52
SHKBP1-224ENST00000600718 DSTQ03001 7570 aaKnown RBP5.52□□□□□ -1.53
SHKBP1-224ENST00000600718 KRTAP5-5Q701N2 237 aaPredicted RBP5.44□□□□□ -1.54
SHKBP1-224ENST00000600718 KRTAP20-1Q3LI63 56 aa5.41□□□□□ -1.54
SHKBP1-224ENST00000600718 MT1AP04731 61 aa5.35□□□□□ -1.55
SHKBP1-224ENST00000600718 KRTAP6-1Q3LI64 71 aa5.28□□□□□ -1.56
SHKBP1-224ENST00000600718 KRTAP2-2Q9BYT5 123 aa5.28□□□□□ -1.56
SHKBP1-224ENST00000600718 KRTAP5-4Q6L8H1 288 aa5.22□□□□□ -1.57
SHKBP1-224ENST00000600718 LCE4AQ5TA78 99 aa5.14□□□□□ -1.59
SHKBP1-224ENST00000600718 KRTAP9-4Q9BYQ2 154 aa5.09□□□□□ -1.59
SHKBP1-224ENST00000600718 KRTAP12-4P60329 112 aa5.09□□□□□ -1.6
SHKBP1-224ENST00000600718 SYNE1Q8NF91 8797 aaKnown RBP5.01□□□□□ -1.61
SHKBP1-224ENST00000600718 MT4P47944 62 aa4.99□□□□□ -1.61
SHKBP1-224ENST00000600718 KRTAP4-6Q9BYQ5 205 aa4.96□□□□□ -1.62
SHKBP1-224ENST00000600718 KRTAP4-9Q9BYQ8 210 aa4.94□□□□□ -1.62
SHKBP1-224ENST00000600718 LCE1DQ5T752 114 aa4.91□□□□□ -1.62
SHKBP1-224ENST00000600718 KRTAP20-2Q3LI61 65 aa4.87□□□□□ -1.63
SHKBP1-224ENST00000600718 KRTAP6-2Q3LI66 62 aa4.87□□□□□ -1.63
SHKBP1-224ENST00000600718 MT3P25713 68 aa4.86□□□□□ -1.63
SHKBP1-224ENST00000600718 KRTAP5-2Q701N4 177 aa4.73□□□□□ -1.65
SHKBP1-224ENST00000600718 HMCN1Q96RW7 5635 aa4.72□□□□□ -1.65
SHKBP1-224ENST00000600718 KRTAP5-3Q6L8H2 238 aa4.7□□□□□ -1.66
SHKBP1-224ENST00000600718 LCE3DQ9BYE3 92 aa4.66□□□□□ -1.66
SHKBP1-224ENST00000600718 LCE3EQ5T5B0 92 aa4.53□□□□□ -1.68
SHKBP1-224ENST00000600718 GPR98Q8WXG9 6306 aa4.43□□□□□ -1.7
SHKBP1-224ENST00000600718 PRM1P04553 51 aa4.38□□□□□ -1.71
SHKBP1-224ENST00000600718 AHNAK2Q8IVF2 5795 aa4.37□□□□□ -1.71
SHKBP1-224ENST00000600718 OBSCNQ5VST9 7968 aa4.31□□□□□ -1.72
SHKBP1-224ENST00000600718 LCE1EQ5T753 118 aa4.23□□□□□ -1.73
SHKBP1-224ENST00000600718 KRTAP5-10Q6L8G5 202 aa4.23□□□□□ -1.73
SHKBP1-224ENST00000600718 KRTAP4-11Q9BYQ6 195 aa4.23□□□□□ -1.73
SHKBP1-224ENST00000600718 KRTAP5-1Q6L8H4 278 aa4.09□□□□□ -1.76
SHKBP1-224ENST00000600718 KRTAP5-8O75690 187 aa4.07□□□□□ -1.76
SHKBP1-224ENST00000600718 KRTAP5-7Q6L8G8 165 aa4.03□□□□□ -1.76
SHKBP1-224ENST00000600718 LCE1BQ5T7P3 118 aa3.95□□□□□ -1.78
SHKBP1-224ENST00000600718 LCE1CQ5T751 118 aa3.93□□□□□ -1.78
SHKBP1-224ENST00000600718 KRTAP4-2Q9BYR5 136 aa3.92□□□□□ -1.78
SHKBP1-224ENST00000600718 MUC5ACP98088 5654 aa3.81□□□□□ -1.8
SHKBP1-224ENST00000600718 KRTAP9-9Q9BYP9 154 aa3.69□□□□□ -1.82
SHKBP1-224ENST00000600718 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.68□□□□□ -1.82
SHKBP1-224ENST00000600718 MUC5BQ9HC84 5762 aaPredicted RBP3.59□□□□□ -1.84
SHKBP1-224ENST00000600718 AHNAKQ09666 5890 aaKnown RBP3.53□□□□□ -1.84
SHKBP1-224ENST00000600718 KRTAP5-11Q6L8G4 156 aa3.47□□□□□ -1.85
SHKBP1-224ENST00000600718 KRTAP21-2Q3LI59 83 aa3.46□□□□□ -1.86
SHKBP1-224ENST00000600718 KRTAP4-12Q9BQ66 201 aa3.25□□□□□ -1.89
SHKBP1-224ENST00000600718 LCE1FQ5T754 118 aa3.16□□□□□ -1.9
SHKBP1-224ENST00000600718 KRTAP4-4Q9BYR3 166 aa3.06□□□□□ -1.92
SHKBP1-224ENST00000600718 PHGR1C9JFL3 82 aa2.98□□□□□ -1.93
SHKBP1-224ENST00000600718 KRTAP21-1Q3LI58 79 aa2.84□□□□□ -1.95
SHKBP1-224ENST00000600718 MUC19Q7Z5P9 8384 aa2.52□□□□□ -2.01
SHKBP1-224ENST00000600718 MUC16Q8WXI7 14507 aa1.9□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 16.5 ms