RNA–Protein interactions for RNA: ENST00000600648.1

FARP1-231, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 433 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-231ENST00000600648 V9GYY9 64 aa7.64□□□□□ -1.19
FARP1-231ENST00000600648 HMCN1Q96RW7 5635 aa7.63□□□□□ -1.19
FARP1-231ENST00000600648 MT4P47944 62 aa7.62□□□□□ -1.19
FARP1-231ENST00000600648 Q1T7F1 81 aa7.61□□□□□ -1.19
FARP1-231ENST00000600648 LCE3AQ5TA76 89 aa7.6□□□□□ -1.19
FARP1-231ENST00000600648 LCE4AQ5TA78 99 aa7.58□□□□□ -1.2
FARP1-231ENST00000600648 C10orf95Q9H7T3 257 aa7.58□□□□□ -1.2
FARP1-231ENST00000600648 KRTAP4-3Q9BYR4 195 aa7.57□□□□□ -1.2
FARP1-231ENST00000600648 TNP1P09430 55 aa7.53□□□□□ -1.2
FARP1-231ENST00000600648 AHNAK2Q8IVF2 5795 aa7.49□□□□□ -1.21
FARP1-231ENST00000600648 PSPHP1O15172 72 aa7.44□□□□□ -1.22
FARP1-231ENST00000600648 UQCR11O14957 56 aa7.43□□□□□ -1.22
FARP1-231ENST00000600648 KRTAP5-4Q6L8H1 288 aa7.4□□□□□ -1.22
FARP1-231ENST00000600648 KRTAP4-6Q9BYQ5 205 aa7.36□□□□□ -1.23
FARP1-231ENST00000600648 KRTAP4-7Q9BYR0 210 aa7.34□□□□□ -1.23
FARP1-231ENST00000600648 MIR22HGQ0VDD5 57 aa7.3□□□□□ -1.24
FARP1-231ENST00000600648 KRTAP12-3P60328 96 aa7.28□□□□□ -1.24
FARP1-231ENST00000600648 A6NED7 52 aa7.24□□□□□ -1.25
FARP1-231ENST00000600648 KRTAP5-10Q6L8G5 202 aa7.22□□□□□ -1.25
FARP1-231ENST00000600648 CDC42SE1Q9NRR8 79 aa7.08□□□□□ -1.28
FARP1-231ENST00000600648 K7ERS5 55 aa7.06□□□□□ -1.28
FARP1-231ENST00000600648 KRTAP20-2Q3LI61 65 aa7.03□□□□□ -1.28
FARP1-231ENST00000600648 KRTAP5-5Q701N2 237 aaPredicted RBP7.03□□□□□ -1.28
FARP1-231ENST00000600648 KRTAP5-3Q6L8H2 238 aa7.02□□□□□ -1.29
FARP1-231ENST00000600648 KRTAP25-1Q3LHN0 102 aa6.97□□□□□ -1.29
FARP1-231ENST00000600648 LOC100996750A0A140TA64 210 aa6.96□□□□□ -1.3
FARP1-231ENST00000600648 KRTAP5-7Q6L8G8 165 aa6.95□□□□□ -1.3
FARP1-231ENST00000600648 SPRR5A0A1B0GTR4 108 aa6.94□□□□□ -1.3
FARP1-231ENST00000600648 KRTAP12-4P60329 112 aa6.92□□□□□ -1.3
FARP1-231ENST00000600648 SYNE1Q8NF91 8797 aaKnown RBP6.9□□□□□ -1.3
FARP1-231ENST00000600648 BRK1Q8WUW1 75 aa6.82□□□□□ -1.32
FARP1-231ENST00000600648 KRTAP19-4Q3LI73 84 aa6.72□□□□□ -1.33
FARP1-231ENST00000600648 KRTAP15-1Q3LI76 137 aa6.72□□□□□ -1.33
FARP1-231ENST00000600648 ROMO1P60602 79 aa6.7□□□□□ -1.34
FARP1-231ENST00000600648 LCE3CQ5T5A8 94 aa6.68□□□□□ -1.34
FARP1-231ENST00000600648 KRTAP23-1A1A580 65 aa6.64□□□□□ -1.35
FARP1-231ENST00000600648 KRTAP6-1Q3LI64 71 aa6.51□□□□□ -1.37
FARP1-231ENST00000600648 PRO0628Q9UI54 55 aa6.5□□□□□ -1.37
FARP1-231ENST00000600648 MT1AP04731 61 aa6.49□□□□□ -1.37
FARP1-231ENST00000600648 KRTAP4-11Q9BYQ6 195 aa6.47□□□□□ -1.37
FARP1-231ENST00000600648 PMAIP1Q13794 54 aa6.45□□□□□ -1.38
FARP1-231ENST00000600648 KRTAP5-2Q701N4 177 aa6.45□□□□□ -1.38
FARP1-231ENST00000600648 KRTAP9-6A8MVA2 160 aa6.33□□□□□ -1.4
FARP1-231ENST00000600648 KRTAP9-4Q9BYQ2 154 aa6.3□□□□□ -1.4
FARP1-231ENST00000600648 KRTAP6-2Q3LI66 62 aa6.26□□□□□ -1.41
FARP1-231ENST00000600648 KRTAP5-8O75690 187 aa6.25□□□□□ -1.41
FARP1-231ENST00000600648 AHNAKQ09666 5890 aaKnown RBP6.24□□□□□ -1.41
FARP1-231ENST00000600648 OBSCNQ5VST9 7968 aa6.2□□□□□ -1.42
FARP1-231ENST00000600648 MUC5BQ9HC84 5762 aaPredicted RBP6.16□□□□□ -1.42
FARP1-231ENST00000600648 MUC5ACP98088 5654 aa6.14□□□□□ -1.43
FARP1-231ENST00000600648 KTN1-AS1Q86SY8 53 aa6.08□□□□□ -1.44
FARP1-231ENST00000600648 PRAC1Q96KF2 57 aa6.05□□□□□ -1.44
FARP1-231ENST00000600648 KRTAP9-9Q9BYP9 154 aa5.98□□□□□ -1.45
FARP1-231ENST00000600648 MT3P25713 68 aa5.95□□□□□ -1.46
FARP1-231ENST00000600648 KRTAP5-1Q6L8H4 278 aa5.84□□□□□ -1.47
FARP1-231ENST00000600648 SVIPQ8NHG7 77 aa5.69□□□□□ -1.5
FARP1-231ENST00000600648 LCE1EQ5T753 118 aa5.48□□□□□ -1.53
FARP1-231ENST00000600648 LCE1BQ5T7P3 118 aa5.28□□□□□ -1.56
FARP1-231ENST00000600648 KRTAP4-2Q9BYR5 136 aa5.24□□□□□ -1.57
FARP1-231ENST00000600648 LCE1CQ5T751 118 aa5.09□□□□□ -1.59
FARP1-231ENST00000600648 LUZP6Q538Z0 58 aa5.05□□□□□ -1.6
FARP1-231ENST00000600648 KRTAP4-12Q9BQ66 201 aa4.89□□□□□ -1.63
FARP1-231ENST00000600648 LCE3DQ9BYE3 92 aa4.77□□□□□ -1.65
FARP1-231ENST00000600648 KRTAP5-11Q6L8G4 156 aa4.63□□□□□ -1.67
FARP1-231ENST00000600648 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.59□□□□□ -1.67
FARP1-231ENST00000600648 NDUFAF8A1L188 74 aa4.58□□□□□ -1.68
FARP1-231ENST00000600648 LCE1FQ5T754 118 aa4.52□□□□□ -1.69
FARP1-231ENST00000600648 LCE3EQ5T5B0 92 aa4.45□□□□□ -1.7
FARP1-231ENST00000600648 KRTAP21-2Q3LI59 83 aa4.26□□□□□ -1.73
FARP1-231ENST00000600648 PHGR1C9JFL3 82 aa4.25□□□□□ -1.73
FARP1-231ENST00000600648 KRTAP4-4Q9BYR3 166 aa4.03□□□□□ -1.76
FARP1-231ENST00000600648 A0A0A0MQY5 61 aa3.94□□□□□ -1.78
FARP1-231ENST00000600648 MUC19Q7Z5P9 8384 aa3.87□□□□□ -1.79
FARP1-231ENST00000600648 INE1O15225 51 aa3.84□□□□□ -1.79
FARP1-231ENST00000600648 PRM1P04553 51 aa3.43□□□□□ -1.86
FARP1-231ENST00000600648 H3BS24 57 aa3.21□□□□□ -1.9
FARP1-231ENST00000600648 KRTAP21-1Q3LI58 79 aa3.2□□□□□ -1.9
FARP1-231ENST00000600648 MUC16Q8WXI7 14507 aa2.72□□□□□ -1.97
Retrieved 78 of 20,778 RNA–protein pairs in 12.6 ms