RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 MUC12Q9UKN1 5478 aa5.34□□□□□ -1.55
HIF3A-218ENST00000600383 KRTAP4-7Q9BYR0 210 aa5.32□□□□□ -1.56
HIF3A-218ENST00000600383 KRTAP9-6A0A140TA67 174 aa5.24□□□□□ -1.57
HIF3A-218ENST00000600383 KRTAP19-3Q7Z4W3 81 aa5.23□□□□□ -1.57
HIF3A-218ENST00000600383 KRTAP19-4Q3LI73 84 aa5.22□□□□□ -1.57
HIF3A-218ENST00000600383 MT1GP13640 62 aa5.18□□□□□ -1.58
HIF3A-218ENST00000600383 KRTAP5-9P26371 169 aa5.15□□□□□ -1.59
HIF3A-218ENST00000600383 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.14□□□□□ -1.59
HIF3A-218ENST00000600383 MT1MQ8N339 61 aa5.14□□□□□ -1.59
HIF3A-218ENST00000600383 KRTAP4-3Q9BYR4 195 aa5.14□□□□□ -1.59
HIF3A-218ENST00000600383 KRTAP9-6A8MVA2 160 aa5.12□□□□□ -1.59
HIF3A-218ENST00000600383 LCE5AQ5TCM9 118 aa5.11□□□□□ -1.59
HIF3A-218ENST00000600383 MDN1Q9NU22 5596 aa5.09□□□□□ -1.59
HIF3A-218ENST00000600383 INE1O15225 51 aa5.08□□□□□ -1.6
HIF3A-218ENST00000600383 LCE1AQ5T7P2 110 aa5.05□□□□□ -1.6
HIF3A-218ENST00000600383 SPRR2EP22531 72 aa5.03□□□□□ -1.6
HIF3A-218ENST00000600383 SPRR2BP35325 72 aa5.03□□□□□ -1.6
HIF3A-218ENST00000600383 SPRR2AP35326 72 aa5.03□□□□□ -1.6
HIF3A-218ENST00000600383 DSTQ03001 7570 aaKnown RBP5.02□□□□□ -1.61
HIF3A-218ENST00000600383 KRTAP6-3Q3LI67 103 aa5.02□□□□□ -1.61
HIF3A-218ENST00000600383 LOC100996750A0A140TA64 210 aa4.99□□□□□ -1.61
HIF3A-218ENST00000600383 KRTAP9-7A8MTY7 169 aa4.84□□□□□ -1.64
HIF3A-218ENST00000600383 SPRR2DP22532 72 aa4.83□□□□□ -1.64
HIF3A-218ENST00000600383 KRTAP2-3P0C7H8 128 aa4.7□□□□□ -1.66
HIF3A-218ENST00000600383 KRTAP2-4Q9BYR9 128 aa4.7□□□□□ -1.66
HIF3A-218ENST00000600383 KRTAP2-1Q9BYU5 128 aa4.7□□□□□ -1.66
HIF3A-218ENST00000600383 NEBP20929 6669 aa4.67□□□□□ -1.66
HIF3A-218ENST00000600383 LCE3BQ5TA77 95 aa4.63□□□□□ -1.67
HIF3A-218ENST00000600383 KRTAP5-5Q701N2 237 aaPredicted RBP4.58□□□□□ -1.68
HIF3A-218ENST00000600383 KRTAP6-1Q3LI64 71 aa4.55□□□□□ -1.68
HIF3A-218ENST00000600383 MT1AP04731 61 aa4.53□□□□□ -1.68
HIF3A-218ENST00000600383 SYNE1Q8NF91 8797 aaKnown RBP4.49□□□□□ -1.69
HIF3A-218ENST00000600383 KRTAP9-4Q9BYQ2 154 aa4.32□□□□□ -1.72
HIF3A-218ENST00000600383 KRTAP5-4Q6L8H1 288 aa4.31□□□□□ -1.72
HIF3A-218ENST00000600383 KRTAP2-2Q9BYT5 123 aa4.3□□□□□ -1.72
HIF3A-218ENST00000600383 KRTAP20-1Q3LI63 56 aa4.28□□□□□ -1.72
HIF3A-218ENST00000600383 KRTAP4-9Q9BYQ8 210 aa4.28□□□□□ -1.72
HIF3A-218ENST00000600383 KRTAP12-4P60329 112 aa4.28□□□□□ -1.72
HIF3A-218ENST00000600383 MT4P47944 62 aa4.25□□□□□ -1.73
HIF3A-218ENST00000600383 LCE4AQ5TA78 99 aa4.21□□□□□ -1.74
HIF3A-218ENST00000600383 KRTAP4-6Q9BYQ5 205 aa4.21□□□□□ -1.74
HIF3A-218ENST00000600383 KRTAP6-2Q3LI66 62 aa4.19□□□□□ -1.74
HIF3A-218ENST00000600383 MT3P25713 68 aa4.12□□□□□ -1.75
HIF3A-218ENST00000600383 LCE1DQ5T752 114 aa4.1□□□□□ -1.75
HIF3A-218ENST00000600383 KRTAP20-2Q3LI61 65 aa4.07□□□□□ -1.76
HIF3A-218ENST00000600383 LCE3DQ9BYE3 92 aa4.07□□□□□ -1.76
HIF3A-218ENST00000600383 HMCN1Q96RW7 5635 aa4.05□□□□□ -1.76
HIF3A-218ENST00000600383 OBSCNQ5VST9 7968 aa4.05□□□□□ -1.76
HIF3A-218ENST00000600383 LCE3EQ5T5B0 92 aa3.95□□□□□ -1.78
HIF3A-218ENST00000600383 KRTAP5-2Q701N4 177 aa3.91□□□□□ -1.78
HIF3A-218ENST00000600383 KRTAP5-3Q6L8H2 238 aa3.89□□□□□ -1.79
HIF3A-218ENST00000600383 PRM1P04553 51 aa3.59□□□□□ -1.84
HIF3A-218ENST00000600383 KRTAP4-11Q9BYQ6 195 aa3.52□□□□□ -1.85
HIF3A-218ENST00000600383 LCE1EQ5T753 118 aa3.5□□□□□ -1.85
HIF3A-218ENST00000600383 AHNAK2Q8IVF2 5795 aa3.46□□□□□ -1.86
HIF3A-218ENST00000600383 LCE1BQ5T7P3 118 aa3.43□□□□□ -1.86
HIF3A-218ENST00000600383 KRTAP5-1Q6L8H4 278 aa3.41□□□□□ -1.86
HIF3A-218ENST00000600383 KRTAP5-8O75690 187 aa3.37□□□□□ -1.87
HIF3A-218ENST00000600383 MUC5ACP98088 5654 aa3.34□□□□□ -1.88
HIF3A-218ENST00000600383 KRTAP5-10Q6L8G5 202 aa3.3□□□□□ -1.88
HIF3A-218ENST00000600383 KRTAP4-2Q9BYR5 136 aa3.3□□□□□ -1.88
HIF3A-218ENST00000600383 LCE1CQ5T751 118 aa3.28□□□□□ -1.88
HIF3A-218ENST00000600383 KRTAP5-7Q6L8G8 165 aa3.2□□□□□ -1.9
HIF3A-218ENST00000600383 GPR98Q8WXG9 6306 aa3.08□□□□□ -1.92
HIF3A-218ENST00000600383 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.04□□□□□ -1.92
HIF3A-218ENST00000600383 KRTAP9-9Q9BYP9 154 aa3.03□□□□□ -1.92
HIF3A-218ENST00000600383 MUC5BQ9HC84 5762 aaPredicted RBP2.96□□□□□ -1.94
HIF3A-218ENST00000600383 KRTAP21-2Q3LI59 83 aa2.95□□□□□ -1.94
HIF3A-218ENST00000600383 KRTAP5-11Q6L8G4 156 aa2.87□□□□□ -1.95
HIF3A-218ENST00000600383 KRTAP4-12Q9BQ66 201 aa2.83□□□□□ -1.96
HIF3A-218ENST00000600383 KRTAP4-4Q9BYR3 166 aa2.72□□□□□ -1.97
HIF3A-218ENST00000600383 AHNAKQ09666 5890 aaKnown RBP2.53□□□□□ -2
HIF3A-218ENST00000600383 LCE1FQ5T754 118 aa2.53□□□□□ -2
HIF3A-218ENST00000600383 PHGR1C9JFL3 82 aa2.48□□□□□ -2.01
HIF3A-218ENST00000600383 MUC19Q7Z5P9 8384 aa2.4□□□□□ -2.02
HIF3A-218ENST00000600383 KRTAP21-1Q3LI58 79 aa2.33□□□□□ -2.04
HIF3A-218ENST00000600383 MUC16Q8WXI7 14507 aa1.6□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 59.5 ms