RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 MT4P47944 62 aa6.22□□□□□ -1.41
SMG9-210ENST00000600097 HMCN1Q96RW7 5635 aa6.19□□□□□ -1.42
SMG9-210ENST00000600097 KRTAP19-5Q3LI72 72 aa6.19□□□□□ -1.42
SMG9-210ENST00000600097 PSPHP1O15172 72 aa6.17□□□□□ -1.42
SMG9-210ENST00000600097 RPS28P62857 69 aaKnown RBP6.17□□□□□ -1.42
SMG9-210ENST00000600097 MIR22HGQ0VDD5 57 aa6.16□□□□□ -1.42
SMG9-210ENST00000600097 MT1MQ8N339 61 aa6.14□□□□□ -1.43
SMG9-210ENST00000600097 MT1LQ93083 61 aa6.08□□□□□ -1.44
SMG9-210ENST00000600097 K7ERS5 55 aa6.07□□□□□ -1.44
SMG9-210ENST00000600097 KRTAP5-10Q6L8G5 202 aa6.07□□□□□ -1.44
SMG9-210ENST00000600097 KRTAP5-4Q6L8H1 288 aa6.07□□□□□ -1.44
SMG9-210ENST00000600097 AHNAK2Q8IVF2 5795 aa6.05□□□□□ -1.44
SMG9-210ENST00000600097 C10orf95Q9H7T3 257 aa6.05□□□□□ -1.44
SMG9-210ENST00000600097 TNP1P09430 55 aa6.04□□□□□ -1.44
SMG9-210ENST00000600097 A6NED7 52 aa6.01□□□□□ -1.45
SMG9-210ENST00000600097 KRTAP4-6Q9BYQ5 205 aa6□□□□□ -1.45
SMG9-210ENST00000600097 KRTAP4-3Q9BYR4 195 aa5.97□□□□□ -1.45
SMG9-210ENST00000600097 KRTAP5-7Q6L8G8 165 aa5.9□□□□□ -1.46
SMG9-210ENST00000600097 LCE3AQ5TA76 89 aa5.88□□□□□ -1.47
SMG9-210ENST00000600097 KRTAP5-3Q6L8H2 238 aa5.86□□□□□ -1.47
SMG9-210ENST00000600097 KRTAP25-1Q3LHN0 102 aa5.83□□□□□ -1.48
SMG9-210ENST00000600097 CDC42SE1Q9NRR8 79 aa5.78□□□□□ -1.48
SMG9-210ENST00000600097 KRTAP20-2Q3LI61 65 aa5.75□□□□□ -1.49
SMG9-210ENST00000600097 KRTAP4-7Q9BYR0 210 aa5.73□□□□□ -1.49
SMG9-210ENST00000600097 SPRR5A0A1B0GTR4 108 aa5.71□□□□□ -1.5
SMG9-210ENST00000600097 KRTAP12-3P60328 96 aa5.67□□□□□ -1.5
SMG9-210ENST00000600097 KRTAP5-5Q701N2 237 aaPredicted RBP5.66□□□□□ -1.5
SMG9-210ENST00000600097 KRTAP23-1A1A580 65 aa5.65□□□□□ -1.5
SMG9-210ENST00000600097 KRTAP12-4P60329 112 aa5.64□□□□□ -1.51
SMG9-210ENST00000600097 ROMO1P60602 79 aa5.64□□□□□ -1.51
SMG9-210ENST00000600097 LOC100996750A0A140TA64 210 aa5.45□□□□□ -1.54
SMG9-210ENST00000600097 KRTAP19-4Q3LI73 84 aa5.45□□□□□ -1.54
SMG9-210ENST00000600097 BRK1Q8WUW1 75 aa5.44□□□□□ -1.54
SMG9-210ENST00000600097 SYNE1Q8NF91 8797 aaKnown RBP5.42□□□□□ -1.54
SMG9-210ENST00000600097 KRTAP15-1Q3LI76 137 aa5.39□□□□□ -1.55
SMG9-210ENST00000600097 KRTAP4-11Q9BYQ6 195 aa5.35□□□□□ -1.55
SMG9-210ENST00000600097 LCE3CQ5T5A8 94 aa5.25□□□□□ -1.57
SMG9-210ENST00000600097 KRTAP5-2Q701N4 177 aa5.25□□□□□ -1.57
SMG9-210ENST00000600097 MT1AP04731 61 aa5.17□□□□□ -1.58
SMG9-210ENST00000600097 KRTAP5-8O75690 187 aa5.16□□□□□ -1.58
SMG9-210ENST00000600097 PMAIP1Q13794 54 aa5.15□□□□□ -1.59
SMG9-210ENST00000600097 KRTAP6-1Q3LI64 71 aa5.14□□□□□ -1.59
SMG9-210ENST00000600097 MUC5ACP98088 5654 aa5.08□□□□□ -1.6
SMG9-210ENST00000600097 AHNAKQ09666 5890 aaKnown RBP5.06□□□□□ -1.6
SMG9-210ENST00000600097 MUC5BQ9HC84 5762 aaPredicted RBP5.04□□□□□ -1.6
SMG9-210ENST00000600097 KRTAP9-4Q9BYQ2 154 aa5.04□□□□□ -1.6
SMG9-210ENST00000600097 KRTAP6-2Q3LI66 62 aa5□□□□□ -1.61
SMG9-210ENST00000600097 OBSCNQ5VST9 7968 aa4.98□□□□□ -1.61
SMG9-210ENST00000600097 KRTAP9-9Q9BYP9 154 aa4.98□□□□□ -1.61
SMG9-210ENST00000600097 PRO0628Q9UI54 55 aa4.97□□□□□ -1.61
SMG9-210ENST00000600097 KRTAP9-6A8MVA2 160 aa4.9□□□□□ -1.63
SMG9-210ENST00000600097 PRAC1Q96KF2 57 aa4.82□□□□□ -1.64
SMG9-210ENST00000600097 MT3P25713 68 aa4.77□□□□□ -1.65
SMG9-210ENST00000600097 KRTAP5-1Q6L8H4 278 aa4.77□□□□□ -1.65
SMG9-210ENST00000600097 KTN1-AS1Q86SY8 53 aa4.7□□□□□ -1.66
SMG9-210ENST00000600097 SVIPQ8NHG7 77 aa4.48□□□□□ -1.69
SMG9-210ENST00000600097 LCE1EQ5T753 118 aa4.47□□□□□ -1.69
SMG9-210ENST00000600097 KRTAP4-2Q9BYR5 136 aa4.23□□□□□ -1.73
SMG9-210ENST00000600097 LCE1BQ5T7P3 118 aa4.21□□□□□ -1.74
SMG9-210ENST00000600097 LUZP6Q538Z0 58 aa4.15□□□□□ -1.75
SMG9-210ENST00000600097 LCE1CQ5T751 118 aa4.14□□□□□ -1.75
SMG9-210ENST00000600097 KRTAP4-12Q9BQ66 201 aa3.94□□□□□ -1.78
SMG9-210ENST00000600097 LCE3DQ9BYE3 92 aa3.85□□□□□ -1.79
SMG9-210ENST00000600097 LCE1FQ5T754 118 aa3.78□□□□□ -1.8
SMG9-210ENST00000600097 KRTAP5-11Q6L8G4 156 aa3.78□□□□□ -1.8
SMG9-210ENST00000600097 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.72□□□□□ -1.81
SMG9-210ENST00000600097 LCE3EQ5T5B0 92 aa3.67□□□□□ -1.82
SMG9-210ENST00000600097 PHGR1C9JFL3 82 aa3.56□□□□□ -1.84
SMG9-210ENST00000600097 NDUFAF8A1L188 74 aa3.5□□□□□ -1.85
SMG9-210ENST00000600097 KRTAP21-2Q3LI59 83 aa3.4□□□□□ -1.87
SMG9-210ENST00000600097 KRTAP4-4Q9BYR3 166 aa3.15□□□□□ -1.91
SMG9-210ENST00000600097 H3BS24 57 aa3.12□□□□□ -1.91
SMG9-210ENST00000600097 MUC19Q7Z5P9 8384 aa3.08□□□□□ -1.92
SMG9-210ENST00000600097 A0A0A0MQY5 61 aa2.96□□□□□ -1.94
SMG9-210ENST00000600097 INE1O15225 51 aa2.92□□□□□ -1.94
SMG9-210ENST00000600097 PRM1P04553 51 aa2.88□□□□□ -1.95
SMG9-210ENST00000600097 KRTAP21-1Q3LI58 79 aa2.73□□□□□ -1.97
SMG9-210ENST00000600097 MUC16Q8WXI7 14507 aa2.1□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 209.5 ms