RNA–Protein interactions for RNA: ENST00000599880.1

SIN3B-210, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 3

Gene SIN3B, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-210ENST00000599880 ATP5EP56381 51 aaPredicted RBP3.98□□□□□ -1.77
SIN3B-210ENST00000599880 KRTAP19-5Q3LI72 72 aa3.98□□□□□ -1.77
SIN3B-210ENST00000599880 A8MU10 97 aa3.97□□□□□ -1.77
SIN3B-210ENST00000599880 MT1GP13640 62 aa3.97□□□□□ -1.77
SIN3B-210ENST00000599880 CCDC179H3BU77 68 aa3.95□□□□□ -1.78
SIN3B-210ENST00000599880 PRR15LQ9BU68 103 aa3.95□□□□□ -1.78
SIN3B-210ENST00000599880 PP632Q6XCG6 107 aa3.94□□□□□ -1.78
SIN3B-210ENST00000599880 TNP1P09430 55 aa3.92□□□□□ -1.78
SIN3B-210ENST00000599880 C10orf95Q9H7T3 257 aa3.9□□□□□ -1.79
SIN3B-210ENST00000599880 LINC01558Q9Y6Z2 57 aa3.9□□□□□ -1.79
SIN3B-210ENST00000599880 RPS28P62857 69 aaKnown RBP3.89□□□□□ -1.79
SIN3B-210ENST00000599880 LCE3AQ5TA76 89 aa3.88□□□□□ -1.79
SIN3B-210ENST00000599880 MT1MQ8N339 61 aa3.88□□□□□ -1.79
SIN3B-210ENST00000599880 MT1LQ93083 61 aa3.88□□□□□ -1.79
SIN3B-210ENST00000599880 TMEM258P61165 79 aa3.85□□□□□ -1.79
SIN3B-210ENST00000599880 UQCR11O14957 56 aa3.82□□□□□ -1.8
SIN3B-210ENST00000599880 KRTAP12-3P60328 96 aa3.75□□□□□ -1.81
SIN3B-210ENST00000599880 KRTAP4-3Q9BYR4 195 aa3.74□□□□□ -1.81
SIN3B-210ENST00000599880 KRTAP5-4Q6L8H1 288 aa3.73□□□□□ -1.81
SIN3B-210ENST00000599880 HMCN1Q96RW7 5635 aa3.73□□□□□ -1.81
SIN3B-210ENST00000599880 MT4P47944 62 aa3.71□□□□□ -1.82
SIN3B-210ENST00000599880 MIR22HGQ0VDD5 57 aa3.71□□□□□ -1.82
SIN3B-210ENST00000599880 KRTAP25-1Q3LHN0 102 aa3.7□□□□□ -1.82
SIN3B-210ENST00000599880 GPR98Q8WXG9 6306 aa3.69□□□□□ -1.82
SIN3B-210ENST00000599880 K7ERS5 55 aa3.67□□□□□ -1.82
SIN3B-210ENST00000599880 V9GYY9 64 aa3.67□□□□□ -1.82
SIN3B-210ENST00000599880 Q1T7F1 81 aa3.62□□□□□ -1.83
SIN3B-210ENST00000599880 PRO0628Q9UI54 55 aa3.61□□□□□ -1.83
SIN3B-210ENST00000599880 PSPHP1O15172 72 aa3.6□□□□□ -1.83
SIN3B-210ENST00000599880 KRTAP23-1A1A580 65 aa3.58□□□□□ -1.84
SIN3B-210ENST00000599880 KRTAP5-5Q701N2 237 aaPredicted RBP3.58□□□□□ -1.84
SIN3B-210ENST00000599880 AHNAK2Q8IVF2 5795 aa3.56□□□□□ -1.84
SIN3B-210ENST00000599880 KRTAP5-10Q6L8G5 202 aa3.54□□□□□ -1.84
SIN3B-210ENST00000599880 SPRR5A0A1B0GTR4 108 aa3.51□□□□□ -1.85
SIN3B-210ENST00000599880 KRTAP20-2Q3LI61 65 aa3.51□□□□□ -1.85
SIN3B-210ENST00000599880 A6NED7 52 aa3.49□□□□□ -1.85
SIN3B-210ENST00000599880 KRTAP15-1Q3LI76 137 aa3.49□□□□□ -1.85
SIN3B-210ENST00000599880 KRTAP12-4P60329 112 aa3.48□□□□□ -1.85
SIN3B-210ENST00000599880 BRK1Q8WUW1 75 aa3.47□□□□□ -1.85
SIN3B-210ENST00000599880 SYNE1Q8NF91 8797 aaKnown RBP3.47□□□□□ -1.85
SIN3B-210ENST00000599880 CDC42SE1Q9NRR8 79 aa3.46□□□□□ -1.86
SIN3B-210ENST00000599880 LCE3CQ5T5A8 94 aa3.45□□□□□ -1.86
SIN3B-210ENST00000599880 KRTAP5-7Q6L8G8 165 aa3.42□□□□□ -1.86
SIN3B-210ENST00000599880 ROMO1P60602 79 aa3.39□□□□□ -1.87
SIN3B-210ENST00000599880 PMAIP1Q13794 54 aa3.37□□□□□ -1.87
SIN3B-210ENST00000599880 MT1AP04731 61 aa3.32□□□□□ -1.88
SIN3B-210ENST00000599880 KTN1-AS1Q86SY8 53 aa3.29□□□□□ -1.88
SIN3B-210ENST00000599880 KRTAP6-1Q3LI64 71 aa3.28□□□□□ -1.88
SIN3B-210ENST00000599880 KRTAP5-2Q701N4 177 aa3.28□□□□□ -1.88
SIN3B-210ENST00000599880 KRTAP9-6A8MVA2 160 aa3.24□□□□□ -1.89
SIN3B-210ENST00000599880 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.17□□□□□ -1.9
SIN3B-210ENST00000599880 KRTAP6-2Q3LI66 62 aa3.13□□□□□ -1.91
SIN3B-210ENST00000599880 KRTAP5-8O75690 187 aa3.1□□□□□ -1.91
SIN3B-210ENST00000599880 KRTAP5-11Q6L8G4 156 aa3.09□□□□□ -1.91
SIN3B-210ENST00000599880 OBSCNQ5VST9 7968 aa3.09□□□□□ -1.91
SIN3B-210ENST00000599880 MT3P25713 68 aa3.03□□□□□ -1.92
SIN3B-210ENST00000599880 PRAC1Q96KF2 57 aa3.01□□□□□ -1.93
SIN3B-210ENST00000599880 MUC5BQ9HC84 5762 aaPredicted RBP2.96□□□□□ -1.94
SIN3B-210ENST00000599880 MUC5ACP98088 5654 aa2.94□□□□□ -1.94
SIN3B-210ENST00000599880 KRTAP5-1Q6L8H4 278 aa2.92□□□□□ -1.94
SIN3B-210ENST00000599880 LCE1EQ5T753 118 aa2.9□□□□□ -1.95
SIN3B-210ENST00000599880 AHNAKQ09666 5890 aaKnown RBP2.89□□□□□ -1.95
SIN3B-210ENST00000599880 A0A0A0MQY5 61 aa2.68□□□□□ -1.98
SIN3B-210ENST00000599880 KRTAP4-4Q9BYR3 166 aa2.64□□□□□ -1.99
SIN3B-210ENST00000599880 LCE1CQ5T751 118 aa2.61□□□□□ -1.99
SIN3B-210ENST00000599880 LCE1BQ5T7P3 118 aa2.61□□□□□ -1.99
SIN3B-210ENST00000599880 NDUFAF8A1L188 74 aa2.57□□□□□ -2
SIN3B-210ENST00000599880 LUZP6Q538Z0 58 aa2.49□□□□□ -2.01
SIN3B-210ENST00000599880 LCE3DQ9BYE3 92 aa2.48□□□□□ -2.01
SIN3B-210ENST00000599880 LCE3EQ5T5B0 92 aa2.33□□□□□ -2.04
SIN3B-210ENST00000599880 LCE1FQ5T754 118 aa2.32□□□□□ -2.04
SIN3B-210ENST00000599880 INE1O15225 51 aa2.23□□□□□ -2.05
SIN3B-210ENST00000599880 KRTAP21-2Q3LI59 83 aa2.17□□□□□ -2.06
SIN3B-210ENST00000599880 PHGR1C9JFL3 82 aa2.05□□□□□ -2.08
SIN3B-210ENST00000599880 MUC19Q7Z5P9 8384 aa1.89□□□□□ -2.11
SIN3B-210ENST00000599880 PRM1P04553 51 aa1.72□□□□□ -2.13
SIN3B-210ENST00000599880 KRTAP21-1Q3LI58 79 aa1.57□□□□□ -2.16
SIN3B-210ENST00000599880 MUC16Q8WXI7 14507 aa1.38□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 47.8 ms