RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 SMIM26A0A096LP01 95 aa7.19□□□□□ -1.26
PNKP-212ENST00000599454 KRTAP5-3Q6L8H2 238 aa7.18□□□□□ -1.26
PNKP-212ENST00000599454 KRTAP20-2Q3LI61 65 aa7.07□□□□□ -1.28
PNKP-212ENST00000599454 A0A1B0GU69 56 aa7.05□□□□□ -1.28
PNKP-212ENST00000599454 A8MU10 97 aa7.05□□□□□ -1.28
PNKP-212ENST00000599454 KRTAP4-7Q9BYR0 210 aa7.05□□□□□ -1.28
PNKP-212ENST00000599454 SPRR5A0A1B0GTR4 108 aa7.02□□□□□ -1.29
PNKP-212ENST00000599454 PCP4P48539 62 aa7.02□□□□□ -1.29
PNKP-212ENST00000599454 KRTAP12-3P60328 96 aa7□□□□□ -1.29
PNKP-212ENST00000599454 ANAPC13Q9BS18 74 aa7□□□□□ -1.29
PNKP-212ENST00000599454 KRTAP5-5Q701N2 237 aaPredicted RBP6.98□□□□□ -1.29
PNKP-212ENST00000599454 H7BZZ5 65 aa6.93□□□□□ -1.3
PNKP-212ENST00000599454 COX7CP15954 63 aa6.93□□□□□ -1.3
PNKP-212ENST00000599454 KRTAP12-4P60329 112 aa6.93□□□□□ -1.3
PNKP-212ENST00000599454 CCDC179H3BU77 68 aa6.79□□□□□ -1.32
PNKP-212ENST00000599454 PRR15LQ9BU68 103 aa6.74□□□□□ -1.33
PNKP-212ENST00000599454 SYNE1Q8NF91 8797 aaKnown RBP6.71□□□□□ -1.34
PNKP-212ENST00000599454 LOC100996750A0A140TA64 210 aa6.7□□□□□ -1.34
PNKP-212ENST00000599454 KRTAP19-4Q3LI73 84 aa6.67□□□□□ -1.34
PNKP-212ENST00000599454 TMEM258P61165 79 aa6.63□□□□□ -1.35
PNKP-212ENST00000599454 KRTAP25-1Q3LHN0 102 aa6.59□□□□□ -1.35
PNKP-212ENST00000599454 ATP5EP56381 51 aaPredicted RBP6.57□□□□□ -1.36
PNKP-212ENST00000599454 KRTAP4-11Q9BYQ6 195 aa6.56□□□□□ -1.36
PNKP-212ENST00000599454 LINC01558Q9Y6Z2 57 aa6.54□□□□□ -1.36
PNKP-212ENST00000599454 UQCR11O14957 56 aa6.48□□□□□ -1.37
PNKP-212ENST00000599454 KRTAP5-2Q701N4 177 aa6.47□□□□□ -1.37
PNKP-212ENST00000599454 RPS28P62857 69 aaKnown RBP6.43□□□□□ -1.38
PNKP-212ENST00000599454 KRTAP15-1Q3LI76 137 aa6.4□□□□□ -1.38
PNKP-212ENST00000599454 LCE3CQ5T5A8 94 aa6.4□□□□□ -1.38
PNKP-212ENST00000599454 MT1AP04731 61 aa6.38□□□□□ -1.39
PNKP-212ENST00000599454 KRTAP23-1A1A580 65 aa6.35□□□□□ -1.39
PNKP-212ENST00000599454 KRTAP5-8O75690 187 aa6.34□□□□□ -1.39
PNKP-212ENST00000599454 KRTAP6-1Q3LI64 71 aa6.34□□□□□ -1.39
PNKP-212ENST00000599454 K7ERS5 55 aa6.3□□□□□ -1.4
PNKP-212ENST00000599454 MIR22HGQ0VDD5 57 aa6.28□□□□□ -1.4
PNKP-212ENST00000599454 AHNAKQ09666 5890 aaKnown RBP6.26□□□□□ -1.41
PNKP-212ENST00000599454 MUC5ACP98088 5654 aa6.24□□□□□ -1.41
PNKP-212ENST00000599454 KRTAP9-4Q9BYQ2 154 aa6.21□□□□□ -1.42
PNKP-212ENST00000599454 MUC5BQ9HC84 5762 aaPredicted RBP6.2□□□□□ -1.42
PNKP-212ENST00000599454 V9GYY9 64 aa6.17□□□□□ -1.42
PNKP-212ENST00000599454 KRTAP6-2Q3LI66 62 aa6.14□□□□□ -1.43
PNKP-212ENST00000599454 Q1T7F1 81 aa6.13□□□□□ -1.43
PNKP-212ENST00000599454 KRTAP9-9Q9BYP9 154 aa6.11□□□□□ -1.43
PNKP-212ENST00000599454 OBSCNQ5VST9 7968 aa6.01□□□□□ -1.45
PNKP-212ENST00000599454 KRTAP9-6A8MVA2 160 aa6.01□□□□□ -1.45
PNKP-212ENST00000599454 PSPHP1O15172 72 aa5.95□□□□□ -1.46
PNKP-212ENST00000599454 MT3P25713 68 aa5.87□□□□□ -1.47
PNKP-212ENST00000599454 KRTAP5-1Q6L8H4 278 aa5.87□□□□□ -1.47
PNKP-212ENST00000599454 CDC42SE1Q9NRR8 79 aa5.87□□□□□ -1.47
PNKP-212ENST00000599454 A6NED7 52 aa5.82□□□□□ -1.48
PNKP-212ENST00000599454 ROMO1P60602 79 aa5.74□□□□□ -1.49
PNKP-212ENST00000599454 BRK1Q8WUW1 75 aa5.74□□□□□ -1.49
PNKP-212ENST00000599454 PRO0628Q9UI54 55 aa5.66□□□□□ -1.5
PNKP-212ENST00000599454 LCE1EQ5T753 118 aa5.5□□□□□ -1.53
PNKP-212ENST00000599454 PMAIP1Q13794 54 aa5.46□□□□□ -1.54
PNKP-212ENST00000599454 KTN1-AS1Q86SY8 53 aa5.24□□□□□ -1.57
PNKP-212ENST00000599454 H3BS24 57 aa5.23□□□□□ -1.57
PNKP-212ENST00000599454 KRTAP4-2Q9BYR5 136 aa5.21□□□□□ -1.58
PNKP-212ENST00000599454 LCE1BQ5T7P3 118 aa5.16□□□□□ -1.58
PNKP-212ENST00000599454 LCE1CQ5T751 118 aa5.1□□□□□ -1.59
PNKP-212ENST00000599454 A0A0A0MQY5 61 aa5.03□□□□□ -1.6
PNKP-212ENST00000599454 PRAC1Q96KF2 57 aa5.03□□□□□ -1.6
PNKP-212ENST00000599454 KRTAP4-12Q9BQ66 201 aa4.83□□□□□ -1.64
PNKP-212ENST00000599454 LCE1FQ5T754 118 aa4.66□□□□□ -1.66
PNKP-212ENST00000599454 KRTAP5-11Q6L8G4 156 aa4.66□□□□□ -1.66
PNKP-212ENST00000599454 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.6□□□□□ -1.67
PNKP-212ENST00000599454 LCE3DQ9BYE3 92 aa4.53□□□□□ -1.68
PNKP-212ENST00000599454 PHGR1C9JFL3 82 aa4.35□□□□□ -1.71
PNKP-212ENST00000599454 LUZP6Q538Z0 58 aa4.23□□□□□ -1.73
PNKP-212ENST00000599454 LCE3EQ5T5B0 92 aa4.2□□□□□ -1.74
PNKP-212ENST00000599454 KRTAP21-2Q3LI59 83 aa4.19□□□□□ -1.74
PNKP-212ENST00000599454 NDUFAF8A1L188 74 aa4.03□□□□□ -1.76
PNKP-212ENST00000599454 KRTAP4-4Q9BYR3 166 aa3.86□□□□□ -1.79
PNKP-212ENST00000599454 MUC19Q7Z5P9 8384 aa3.75□□□□□ -1.81
PNKP-212ENST00000599454 INE1O15225 51 aa3.51□□□□□ -1.85
PNKP-212ENST00000599454 KRTAP21-1Q3LI58 79 aa3.34□□□□□ -1.87
PNKP-212ENST00000599454 PRM1P04553 51 aa2.88□□□□□ -1.95
PNKP-212ENST00000599454 MUC16Q8WXI7 14507 aa2.65□□□□□ -1.98
Retrieved 78 of 20,778 RNA–protein pairs in 5.5 ms