RNA–Protein interactions for RNA: ENST00000598478.1

LINC00343-206, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 618 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-206ENST00000598478 TP53AIP1Q9HCN2 124 aa2.61□□□□□ -1.99
LINC00343-206ENST00000598478 KRTAP19-5Q3LI72 72 aa2.6□□□□□ -1.99
LINC00343-206ENST00000598478 LINC00643Q86TS7 51 aa2.6□□□□□ -1.99
LINC00343-206ENST00000598478 TRAV22A0A0B4J277 110 aa2.58□□□□□ -2
LINC00343-206ENST00000598478 HIST1H4AP62805 103 aaKnown RBP2.58□□□□□ -2
LINC00343-206ENST00000598478 MT1LQ93083 61 aa2.58□□□□□ -2
LINC00343-206ENST00000598478 J3QR89 54 aa2.57□□□□□ -2
LINC00343-206ENST00000598478 LOC101927531A0A1B0GV80 90 aa2.56□□□□□ -2
LINC00343-206ENST00000598478 CYP4F30PQ9H0H9 118 aa2.56□□□□□ -2
LINC00343-206ENST00000598478 UQCRQO14949 82 aa2.55□□□□□ -2
LINC00343-206ENST00000598478 H0Y9P7 68 aa2.54□□□□□ -2
LINC00343-206ENST00000598478 ATOX1O00244 68 aa2.54□□□□□ -2
LINC00343-206ENST00000598478 KRTAP12-4P60329 112 aa2.54□□□□□ -2
LINC00343-206ENST00000598478 C20orf197Q8N268 126 aa2.54□□□□□ -2
LINC00343-206ENST00000598478 K7ERU9 68 aa2.52□□□□□ -2.01
LINC00343-206ENST00000598478 MT-ATP8P03928 68 aa2.5□□□□□ -2.01
LINC00343-206ENST00000598478 MP68P56378 58 aa2.5□□□□□ -2.01
LINC00343-206ENST00000598478 LINC00208Q96KT6 92 aa2.5□□□□□ -2.01
LINC00343-206ENST00000598478 SYNE1Q8NF91 8797 aaKnown RBP2.48□□□□□ -2.01
LINC00343-206ENST00000598478 H3BPC8 53 aa2.48□□□□□ -2.01
LINC00343-206ENST00000598478 A0A0D9SG42 100 aa2.47□□□□□ -2.01
LINC00343-206ENST00000598478 SCGB1A1P11684 91 aa2.46□□□□□ -2.02
LINC00343-206ENST00000598478 KRTAP21-2Q3LI59 83 aa2.45□□□□□ -2.02
LINC00343-206ENST00000598478 SMIM20Q8N5G0 67 aa2.44□□□□□ -2.02
LINC00343-206ENST00000598478 DMAC1Q96GE9 116 aa2.44□□□□□ -2.02
LINC00343-206ENST00000598478 TRAV7A0A075B6U4 112 aa2.43□□□□□ -2.02
LINC00343-206ENST00000598478 CAMK2N1Q7Z7J9 78 aa2.42□□□□□ -2.02
LINC00343-206ENST00000598478 SERP2Q8N6R1 65 aa2.38□□□□□ -2.03
LINC00343-206ENST00000598478 SNURFQ9Y675 71 aa2.38□□□□□ -2.03
LINC00343-206ENST00000598478 SPANXA2-OT1Q8N9U9 137 aa2.36□□□□□ -2.03
LINC00343-206ENST00000598478 ACYP2P14621 99 aa2.35□□□□□ -2.03
LINC00343-206ENST00000598478 C10orf95Q9H7T3 257 aa2.35□□□□□ -2.03
LINC00343-206ENST00000598478 COX7CP15954 63 aa2.32□□□□□ -2.04
LINC00343-206ENST00000598478 SPTSSBQ8NFR3 76 aa2.31□□□□□ -2.04
LINC00343-206ENST00000598478 CHKB-CPT1BH3BT56 60 aa2.3□□□□□ -2.04
LINC00343-206ENST00000598478 H7BZZ5 65 aa2.29□□□□□ -2.04
LINC00343-206ENST00000598478 KRTAP13-4Q3LI77 160 aa2.29□□□□□ -2.04
LINC00343-206ENST00000598478 COA5Q86WW8 74 aa2.28□□□□□ -2.04
LINC00343-206ENST00000598478 ANAPC13Q9BS18 74 aa2.26□□□□□ -2.05
LINC00343-206ENST00000598478 CCDC179H3BU77 68 aa2.23□□□□□ -2.05
LINC00343-206ENST00000598478 KRTAP6-1Q3LI64 71 aa2.23□□□□□ -2.05
LINC00343-206ENST00000598478 KRTAP6-2Q3LI66 62 aa2.22□□□□□ -2.05
LINC00343-206ENST00000598478 ATP5EP56381 51 aaPredicted RBP2.19□□□□□ -2.06
LINC00343-206ENST00000598478 SEC61GP60059 68 aa2.18□□□□□ -2.06
LINC00343-206ENST00000598478 KRTAP12-3P60328 96 aa2.17□□□□□ -2.06
LINC00343-206ENST00000598478 SERP1Q9Y6X1 66 aa2.17□□□□□ -2.06
LINC00343-206ENST00000598478 MT1AP04731 61 aa2.16□□□□□ -2.06
LINC00343-206ENST00000598478 TMEM258P61165 79 aa2.16□□□□□ -2.06
LINC00343-206ENST00000598478 A0A1B0GU33 70 aa2.15□□□□□ -2.07
LINC00343-206ENST00000598478 SPATA8Q6RVD6 105 aa2.15□□□□□ -2.07
LINC00343-206ENST00000598478 SPINT4Q6UDR6 99 aa2.14□□□□□ -2.07
LINC00343-206ENST00000598478 A0A1B0GU69 56 aa2.13□□□□□ -2.07
LINC00343-206ENST00000598478 KRTAP12-1P59990 96 aa2.11□□□□□ -2.07
LINC00343-206ENST00000598478 LINC01558Q9Y6Z2 57 aa2.11□□□□□ -2.07
LINC00343-206ENST00000598478 SMIM26A0A096LP01 95 aa2.09□□□□□ -2.07
LINC00343-206ENST00000598478 PRR15LQ9BU68 103 aa2.09□□□□□ -2.07
LINC00343-206ENST00000598478 TNP1P09430 55 aa2.07□□□□□ -2.08
LINC00343-206ENST00000598478 UQCR11O14957 56 aa2.03□□□□□ -2.08
LINC00343-206ENST00000598478 Q1T7F1 81 aa2□□□□□ -2.09
LINC00343-206ENST00000598478 V9GYY9 64 aa2□□□□□ -2.09
LINC00343-206ENST00000598478 PSPHP1O15172 72 aa1.98□□□□□ -2.09
LINC00343-206ENST00000598478 MIR22HGQ0VDD5 57 aa1.98□□□□□ -2.09
LINC00343-206ENST00000598478 RPS28P62857 69 aaKnown RBP1.94□□□□□ -2.1
LINC00343-206ENST00000598478 KRTAP25-1Q3LHN0 102 aa1.94□□□□□ -2.1
LINC00343-206ENST00000598478 A6NED7 52 aa1.92□□□□□ -2.1
LINC00343-206ENST00000598478 K7ERS5 55 aa1.92□□□□□ -2.1
LINC00343-206ENST00000598478 PHGR1C9JFL3 82 aa1.87□□□□□ -2.11
LINC00343-206ENST00000598478 CDC42SE1Q9NRR8 79 aa1.86□□□□□ -2.11
LINC00343-206ENST00000598478 ROMO1P60602 79 aa1.82□□□□□ -2.12
LINC00343-206ENST00000598478 BRK1Q8WUW1 75 aa1.71□□□□□ -2.14
LINC00343-206ENST00000598478 LUZP6Q538Z0 58 aa1.69□□□□□ -2.14
LINC00343-206ENST00000598478 PMAIP1Q13794 54 aa1.59□□□□□ -2.15
LINC00343-206ENST00000598478 PRO0628Q9UI54 55 aa1.57□□□□□ -2.16
LINC00343-206ENST00000598478 KTN1-AS1Q86SY8 53 aa1.48□□□□□ -2.17
LINC00343-206ENST00000598478 KRTAP21-1Q3LI58 79 aa1.4□□□□□ -2.19
LINC00343-206ENST00000598478 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
LINC00343-206ENST00000598478 PRM1P04553 51 aa0.94□□□□□ -2.26
LINC00343-206ENST00000598478 INE1O15225 51 aa0.87□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 55.2 ms