RNA–Protein interactions for RNA: ENST00000598444.1

ARHGEF1-215, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 425 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-215ENST00000598444 PRR15LQ9BU68 103 aa3.06□□□□□ -1.92
ARHGEF1-215ENST00000598444 CCDC179H3BU77 68 aa3.03□□□□□ -1.92
ARHGEF1-215ENST00000598444 KRTAP5-4Q6L8H1 288 aa3.03□□□□□ -1.92
ARHGEF1-215ENST00000598444 ATP5EP56381 51 aaPredicted RBP3.01□□□□□ -1.93
ARHGEF1-215ENST00000598444 KRTAP4-6Q9BYQ5 205 aa3.01□□□□□ -1.93
ARHGEF1-215ENST00000598444 LINC01558Q9Y6Z2 57 aa3.01□□□□□ -1.93
ARHGEF1-215ENST00000598444 KRTAP12-3P60328 96 aa3□□□□□ -1.93
ARHGEF1-215ENST00000598444 KRTAP4-7Q9BYR0 210 aa3□□□□□ -1.93
ARHGEF1-215ENST00000598444 AHNAK2Q8IVF2 5795 aa2.97□□□□□ -1.93
ARHGEF1-215ENST00000598444 UQCR11O14957 56 aa2.96□□□□□ -1.94
ARHGEF1-215ENST00000598444 KRTAP5-10Q6L8G5 202 aa2.94□□□□□ -1.94
ARHGEF1-215ENST00000598444 KRTAP25-1Q3LHN0 102 aa2.9□□□□□ -1.95
ARHGEF1-215ENST00000598444 TMEM258P61165 79 aa2.89□□□□□ -1.95
ARHGEF1-215ENST00000598444 MIR22HGQ0VDD5 57 aa2.88□□□□□ -1.95
ARHGEF1-215ENST00000598444 KRTAP20-2Q3LI61 65 aa2.88□□□□□ -1.95
ARHGEF1-215ENST00000598444 KRTAP5-3Q6L8H2 238 aa2.87□□□□□ -1.95
ARHGEF1-215ENST00000598444 KRTAP5-5Q701N2 237 aaPredicted RBP2.87□□□□□ -1.95
ARHGEF1-215ENST00000598444 K7ERS5 55 aa2.86□□□□□ -1.95
ARHGEF1-215ENST00000598444 LOC100996750A0A140TA64 210 aa2.85□□□□□ -1.95
ARHGEF1-215ENST00000598444 SPRR5A0A1B0GTR4 108 aa2.85□□□□□ -1.95
ARHGEF1-215ENST00000598444 KRTAP12-4P60329 112 aa2.85□□□□□ -1.95
ARHGEF1-215ENST00000598444 KRTAP5-7Q6L8G8 165 aa2.84□□□□□ -1.95
ARHGEF1-215ENST00000598444 KRTAP19-4Q3LI73 84 aa2.83□□□□□ -1.96
ARHGEF1-215ENST00000598444 SYNE1Q8NF91 8797 aaKnown RBP2.8□□□□□ -1.96
ARHGEF1-215ENST00000598444 PSPHP1O15172 72 aa2.79□□□□□ -1.96
ARHGEF1-215ENST00000598444 KRTAP23-1A1A580 65 aa2.78□□□□□ -1.96
ARHGEF1-215ENST00000598444 KRTAP15-1Q3LI76 137 aa2.78□□□□□ -1.96
ARHGEF1-215ENST00000598444 V9GYY9 64 aa2.77□□□□□ -1.97
ARHGEF1-215ENST00000598444 LCE3CQ5T5A8 94 aa2.76□□□□□ -1.97
ARHGEF1-215ENST00000598444 Q1T7F1 81 aa2.75□□□□□ -1.97
ARHGEF1-215ENST00000598444 A6NED7 52 aa2.69□□□□□ -1.98
ARHGEF1-215ENST00000598444 CDC42SE1Q9NRR8 79 aa2.68□□□□□ -1.98
ARHGEF1-215ENST00000598444 MT1AP04731 61 aa2.67□□□□□ -1.98
ARHGEF1-215ENST00000598444 KRTAP6-1Q3LI64 71 aa2.67□□□□□ -1.98
ARHGEF1-215ENST00000598444 KRTAP4-11Q9BYQ6 195 aa2.65□□□□□ -1.99
ARHGEF1-215ENST00000598444 ROMO1P60602 79 aa2.64□□□□□ -1.99
ARHGEF1-215ENST00000598444 RPS28P62857 69 aaKnown RBP2.64□□□□□ -1.99
ARHGEF1-215ENST00000598444 KRTAP5-2Q701N4 177 aa2.64□□□□□ -1.99
ARHGEF1-215ENST00000598444 KRTAP9-6A8MVA2 160 aa2.6□□□□□ -1.99
ARHGEF1-215ENST00000598444 KRTAP9-4Q9BYQ2 154 aa2.6□□□□□ -1.99
ARHGEF1-215ENST00000598444 KRTAP6-2Q3LI66 62 aa2.57□□□□□ -2
ARHGEF1-215ENST00000598444 KRTAP5-8O75690 187 aa2.56□□□□□ -2
ARHGEF1-215ENST00000598444 OBSCNQ5VST9 7968 aa2.55□□□□□ -2
ARHGEF1-215ENST00000598444 MUC5BQ9HC84 5762 aaPredicted RBP2.46□□□□□ -2.02
ARHGEF1-215ENST00000598444 MT3P25713 68 aa2.45□□□□□ -2.02
ARHGEF1-215ENST00000598444 KRTAP9-9Q9BYP9 154 aa2.45□□□□□ -2.02
ARHGEF1-215ENST00000598444 MUC5ACP98088 5654 aa2.44□□□□□ -2.02
ARHGEF1-215ENST00000598444 AHNAKQ09666 5890 aaKnown RBP2.43□□□□□ -2.02
ARHGEF1-215ENST00000598444 KRTAP5-1Q6L8H4 278 aa2.39□□□□□ -2.03
ARHGEF1-215ENST00000598444 PCP4P48539 62 aa2.38□□□□□ -2.03
ARHGEF1-215ENST00000598444 LCE1EQ5T753 118 aa2.26□□□□□ -2.05
ARHGEF1-215ENST00000598444 BRK1Q8WUW1 75 aa2.2□□□□□ -2.06
ARHGEF1-215ENST00000598444 LCE1BQ5T7P3 118 aa2.16□□□□□ -2.06
ARHGEF1-215ENST00000598444 KRTAP4-2Q9BYR5 136 aa2.14□□□□□ -2.07
ARHGEF1-215ENST00000598444 LCE1CQ5T751 118 aa2.1□□□□□ -2.07
ARHGEF1-215ENST00000598444 PMAIP1Q13794 54 aa2.07□□□□□ -2.08
ARHGEF1-215ENST00000598444 PRAC1Q96KF2 57 aa2.01□□□□□ -2.09
ARHGEF1-215ENST00000598444 KRTAP4-12Q9BQ66 201 aa2□□□□□ -2.09
ARHGEF1-215ENST00000598444 LCE3DQ9BYE3 92 aa1.98□□□□□ -2.09
ARHGEF1-215ENST00000598444 KRTAP5-11Q6L8G4 156 aa1.9□□□□□ -2.11
ARHGEF1-215ENST00000598444 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.89□□□□□ -2.11
ARHGEF1-215ENST00000598444 LCE1FQ5T754 118 aa1.88□□□□□ -2.11
ARHGEF1-215ENST00000598444 LCE3EQ5T5B0 92 aa1.85□□□□□ -2.11
ARHGEF1-215ENST00000598444 PRO0628Q9UI54 55 aa1.79□□□□□ -2.12
ARHGEF1-215ENST00000598444 KRTAP21-2Q3LI59 83 aa1.75□□□□□ -2.13
ARHGEF1-215ENST00000598444 KTN1-AS1Q86SY8 53 aa1.74□□□□□ -2.13
ARHGEF1-215ENST00000598444 PHGR1C9JFL3 82 aa1.73□□□□□ -2.13
ARHGEF1-215ENST00000598444 LUZP6Q538Z0 58 aa1.73□□□□□ -2.13
ARHGEF1-215ENST00000598444 SVIPQ8NHG7 77 aa1.71□□□□□ -2.14
ARHGEF1-215ENST00000598444 KRTAP4-4Q9BYR3 166 aa1.64□□□□□ -2.15
ARHGEF1-215ENST00000598444 MUC19Q7Z5P9 8384 aa1.58□□□□□ -2.16
ARHGEF1-215ENST00000598444 PRM1P04553 51 aa1.35□□□□□ -2.19
ARHGEF1-215ENST00000598444 KRTAP21-1Q3LI58 79 aa1.3□□□□□ -2.2
ARHGEF1-215ENST00000598444 NDUFAF8A1L188 74 aa1.26□□□□□ -2.21
ARHGEF1-215ENST00000598444 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
ARHGEF1-215ENST00000598444 INE1O15225 51 aa0.97□□□□□ -2.25
ARHGEF1-215ENST00000598444 A0A0A0MQY5 61 aa0.91□□□□□ -2.26
ARHGEF1-215ENST00000598444 H3BS24 57 aa0□□□□□ -2.41
Retrieved 78 of 20,778 RNA–protein pairs in 81.5 ms