RNA–Protein interactions for RNA: ENST00000597466.1

SHD-203, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

TSL 2

Gene SHD, Length 289 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-203ENST00000597466 PRR15LQ9BU68 103 aa3.83□□□□□ -1.8
SHD-203ENST00000597466 SPINT4Q6UDR6 99 aa3.82□□□□□ -1.8
SHD-203ENST00000597466 LINC01558Q9Y6Z2 57 aa3.82□□□□□ -1.8
SHD-203ENST00000597466 SMIM26A0A096LP01 95 aa3.81□□□□□ -1.8
SHD-203ENST00000597466 KRTAP12-1P59990 96 aa3.78□□□□□ -1.8
SHD-203ENST00000597466 A8MU10 97 aa3.76□□□□□ -1.81
SHD-203ENST00000597466 KRTAP5-7Q6L8G8 165 aa3.74□□□□□ -1.81
SHD-203ENST00000597466 LCE3AQ5TA76 89 aa3.73□□□□□ -1.81
SHD-203ENST00000597466 KRTAP5-3Q6L8H2 238 aa3.73□□□□□ -1.81
SHD-203ENST00000597466 C10orf95Q9H7T3 257 aa3.73□□□□□ -1.81
SHD-203ENST00000597466 UQCR11O14957 56 aa3.71□□□□□ -1.82
SHD-203ENST00000597466 KRTAP4-7Q9BYR0 210 aa3.71□□□□□ -1.82
SHD-203ENST00000597466 V9GYY9 64 aa3.68□□□□□ -1.82
SHD-203ENST00000597466 KRTAP20-2Q3LI61 65 aa3.66□□□□□ -1.82
SHD-203ENST00000597466 PCP4P48539 62 aa3.65□□□□□ -1.83
SHD-203ENST00000597466 Q1T7F1 81 aa3.65□□□□□ -1.83
SHD-203ENST00000597466 PSPHP1O15172 72 aa3.63□□□□□ -1.83
SHD-203ENST00000597466 MIR22HGQ0VDD5 57 aa3.63□□□□□ -1.83
SHD-203ENST00000597466 KRTAP5-5Q701N2 237 aaPredicted RBP3.61□□□□□ -1.83
SHD-203ENST00000597466 SPRR5A0A1B0GTR4 108 aa3.59□□□□□ -1.83
SHD-203ENST00000597466 TNP1P09430 55 aa3.59□□□□□ -1.83
SHD-203ENST00000597466 RPS28P62857 69 aaKnown RBP3.58□□□□□ -1.84
SHD-203ENST00000597466 SYNE1Q8NF91 8797 aaKnown RBP3.56□□□□□ -1.84
SHD-203ENST00000597466 K7ERS5 55 aa3.55□□□□□ -1.84
SHD-203ENST00000597466 KRTAP12-3P60328 96 aa3.54□□□□□ -1.84
SHD-203ENST00000597466 LOC100996750A0A140TA64 210 aa3.53□□□□□ -1.84
SHD-203ENST00000597466 A6NED7 52 aa3.52□□□□□ -1.85
SHD-203ENST00000597466 KRTAP12-4P60329 112 aa3.5□□□□□ -1.85
SHD-203ENST00000597466 KRTAP25-1Q3LHN0 102 aa3.45□□□□□ -1.86
SHD-203ENST00000597466 KRTAP4-11Q9BYQ6 195 aa3.39□□□□□ -1.87
SHD-203ENST00000597466 CDC42SE1Q9NRR8 79 aa3.37□□□□□ -1.87
SHD-203ENST00000597466 MUC5ACP98088 5654 aa3.35□□□□□ -1.87
SHD-203ENST00000597466 AHNAKQ09666 5890 aaKnown RBP3.34□□□□□ -1.87
SHD-203ENST00000597466 MUC5BQ9HC84 5762 aaPredicted RBP3.34□□□□□ -1.88
SHD-203ENST00000597466 OBSCNQ5VST9 7968 aa3.33□□□□□ -1.88
SHD-203ENST00000597466 KRTAP23-1A1A580 65 aa3.33□□□□□ -1.88
SHD-203ENST00000597466 KRTAP5-2Q701N4 177 aa3.33□□□□□ -1.88
SHD-203ENST00000597466 ROMO1P60602 79 aa3.32□□□□□ -1.88
SHD-203ENST00000597466 KRTAP5-8O75690 187 aa3.29□□□□□ -1.88
SHD-203ENST00000597466 KRTAP6-1Q3LI64 71 aa3.29□□□□□ -1.88
SHD-203ENST00000597466 MT1AP04731 61 aa3.25□□□□□ -1.89
SHD-203ENST00000597466 LCE3CQ5T5A8 94 aa3.24□□□□□ -1.89
SHD-203ENST00000597466 KRTAP19-4Q3LI73 84 aa3.22□□□□□ -1.89
SHD-203ENST00000597466 KRTAP15-1Q3LI76 137 aa3.21□□□□□ -1.9
SHD-203ENST00000597466 KRTAP6-2Q3LI66 62 aa3.18□□□□□ -1.9
SHD-203ENST00000597466 KRTAP9-4Q9BYQ2 154 aa3.16□□□□□ -1.9
SHD-203ENST00000597466 BRK1Q8WUW1 75 aa3.15□□□□□ -1.91
SHD-203ENST00000597466 KRTAP9-6A8MVA2 160 aa3.14□□□□□ -1.91
SHD-203ENST00000597466 KRTAP9-9Q9BYP9 154 aa3.12□□□□□ -1.91
SHD-203ENST00000597466 KRTAP5-1Q6L8H4 278 aa3.05□□□□□ -1.92
SHD-203ENST00000597466 PMAIP1Q13794 54 aa2.99□□□□□ -1.93
SHD-203ENST00000597466 MT3P25713 68 aa2.96□□□□□ -1.94
SHD-203ENST00000597466 PRO0628Q9UI54 55 aa2.88□□□□□ -1.95
SHD-203ENST00000597466 PRAC1Q96KF2 57 aa2.83□□□□□ -1.96
SHD-203ENST00000597466 LCE1EQ5T753 118 aa2.76□□□□□ -1.97
SHD-203ENST00000597466 KTN1-AS1Q86SY8 53 aa2.7□□□□□ -1.98
SHD-203ENST00000597466 KRTAP4-2Q9BYR5 136 aa2.7□□□□□ -1.98
SHD-203ENST00000597466 LCE1BQ5T7P3 118 aa2.68□□□□□ -1.98
SHD-203ENST00000597466 SVIPQ8NHG7 77 aa2.6□□□□□ -1.99
SHD-203ENST00000597466 LCE1CQ5T751 118 aa2.58□□□□□ -2
SHD-203ENST00000597466 KRTAP4-12Q9BQ66 201 aa2.56□□□□□ -2
SHD-203ENST00000597466 LUZP6Q538Z0 58 aa2.4□□□□□ -2.03
SHD-203ENST00000597466 KRTAP5-11Q6L8G4 156 aa2.39□□□□□ -2.03
SHD-203ENST00000597466 LCE1FQ5T754 118 aa2.32□□□□□ -2.04
SHD-203ENST00000597466 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.32□□□□□ -2.04
SHD-203ENST00000597466 LCE3DQ9BYE3 92 aa2.29□□□□□ -2.04
SHD-203ENST00000597466 PHGR1C9JFL3 82 aa2.27□□□□□ -2.05
SHD-203ENST00000597466 LCE3EQ5T5B0 92 aa2.18□□□□□ -2.06
SHD-203ENST00000597466 KRTAP21-2Q3LI59 83 aa2.16□□□□□ -2.06
SHD-203ENST00000597466 KRTAP4-4Q9BYR3 166 aa2.06□□□□□ -2.08
SHD-203ENST00000597466 MUC19Q7Z5P9 8384 aa2.06□□□□□ -2.08
SHD-203ENST00000597466 NDUFAF8A1L188 74 aa2.05□□□□□ -2.08
SHD-203ENST00000597466 A0A0A0MQY5 61 aa1.87□□□□□ -2.11
SHD-203ENST00000597466 INE1O15225 51 aa1.75□□□□□ -2.13
SHD-203ENST00000597466 PRM1P04553 51 aa1.7□□□□□ -2.14
SHD-203ENST00000597466 H3BS24 57 aa1.69□□□□□ -2.14
SHD-203ENST00000597466 KRTAP21-1Q3LI58 79 aa1.69□□□□□ -2.14
SHD-203ENST00000597466 MUC16Q8WXI7 14507 aa1.36□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 61 ms