RNA–Protein interactions for RNA: ENST00000596828.1

LINC01440-203, Transcript of long intergenic non-protein coding RNA 1440, humanhuman

TSL 5 BASIC

Gene LINC01440, Length 1,005 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01440-203ENST00000596828 CYSTM1Q9H1C7 97 aa3.88□□□□□ -1.79
LINC01440-203ENST00000596828 SERP1Q9Y6X1 66 aa3.88□□□□□ -1.79
LINC01440-203ENST00000596828 SPRR2DP22532 72 aa3.87□□□□□ -1.79
LINC01440-203ENST00000596828 H7BZZ5 65 aa3.85□□□□□ -1.79
LINC01440-203ENST00000596828 SPATA8Q6RVD6 105 aa3.85□□□□□ -1.79
LINC01440-203ENST00000596828 A0A1B0GU33 70 aa3.82□□□□□ -1.8
LINC01440-203ENST00000596828 SPINT4Q6UDR6 99 aa3.81□□□□□ -1.8
LINC01440-203ENST00000596828 KRTAP2-1Q9BYU5 128 aa3.8□□□□□ -1.8
LINC01440-203ENST00000596828 K7ERS5 55 aa3.78□□□□□ -1.8
LINC01440-203ENST00000596828 A0A1B0GU69 56 aa3.75□□□□□ -1.81
LINC01440-203ENST00000596828 KRTAP12-1P59990 96 aa3.74□□□□□ -1.81
LINC01440-203ENST00000596828 CCDC179H3BU77 68 aa3.73□□□□□ -1.81
LINC01440-203ENST00000596828 LCE3CQ5T5A8 94 aa3.73□□□□□ -1.81
LINC01440-203ENST00000596828 KRTAP19-7Q3SYF9 63 aa3.7□□□□□ -1.82
LINC01440-203ENST00000596828 KRTAP5-1Q6L8H4 278 aa3.68□□□□□ -1.82
LINC01440-203ENST00000596828 MT1EP04732 61 aa3.67□□□□□ -1.82
LINC01440-203ENST00000596828 KRTAP9-6A8MVA2 160 aa3.65□□□□□ -1.83
LINC01440-203ENST00000596828 A6NED7 52 aa3.64□□□□□ -1.83
LINC01440-203ENST00000596828 KRTAP19-5Q3LI72 72 aa3.64□□□□□ -1.83
LINC01440-203ENST00000596828 KRTAP19-3Q7Z4W3 81 aa3.64□□□□□ -1.83
LINC01440-203ENST00000596828 ATP5EP56381 51 aaPredicted RBP3.62□□□□□ -1.83
LINC01440-203ENST00000596828 PRR15LQ9BU68 103 aa3.62□□□□□ -1.83
LINC01440-203ENST00000596828 DSTQ03001 7570 aaKnown RBP3.59□□□□□ -1.83
LINC01440-203ENST00000596828 C10orf95Q9H7T3 257 aa3.59□□□□□ -1.83
LINC01440-203ENST00000596828 PMAIP1Q13794 54 aa3.58□□□□□ -1.84
LINC01440-203ENST00000596828 LCE3AQ5TA76 89 aa3.57□□□□□ -1.84
LINC01440-203ENST00000596828 LINC01558Q9Y6Z2 57 aa3.57□□□□□ -1.84
LINC01440-203ENST00000596828 TNP1P09430 55 aa3.56□□□□□ -1.84
LINC01440-203ENST00000596828 MT1GP13640 62 aa3.55□□□□□ -1.84
LINC01440-203ENST00000596828 TMEM258P61165 79 aa3.53□□□□□ -1.84
LINC01440-203ENST00000596828 PP632Q6XCG6 107 aa3.53□□□□□ -1.84
LINC01440-203ENST00000596828 MT1MQ8N339 61 aa3.51□□□□□ -1.85
LINC01440-203ENST00000596828 MT1LQ93083 61 aa3.51□□□□□ -1.85
LINC01440-203ENST00000596828 KRTAP4-4Q9BYR3 166 aa3.51□□□□□ -1.85
LINC01440-203ENST00000596828 UQCR11O14957 56 aa3.5□□□□□ -1.85
LINC01440-203ENST00000596828 KRTAP5-4Q6L8H1 288 aa3.49□□□□□ -1.85
LINC01440-203ENST00000596828 KRTAP4-3Q9BYR4 195 aa3.48□□□□□ -1.85
LINC01440-203ENST00000596828 KRTAP25-1Q3LHN0 102 aa3.46□□□□□ -1.86
LINC01440-203ENST00000596828 MIR22HGQ0VDD5 57 aa3.43□□□□□ -1.86
LINC01440-203ENST00000596828 MT4P47944 62 aa3.42□□□□□ -1.86
LINC01440-203ENST00000596828 KRTAP12-3P60328 96 aa3.41□□□□□ -1.86
LINC01440-203ENST00000596828 LCE3EQ5T5B0 92 aa3.4□□□□□ -1.87
LINC01440-203ENST00000596828 Q1T7F1 81 aa3.32□□□□□ -1.88
LINC01440-203ENST00000596828 GPR98Q8WXG9 6306 aa3.31□□□□□ -1.88
LINC01440-203ENST00000596828 HMCN1Q96RW7 5635 aa3.3□□□□□ -1.88
LINC01440-203ENST00000596828 SPRR5A0A1B0GTR4 108 aa3.27□□□□□ -1.89
LINC01440-203ENST00000596828 OBSCNQ5VST9 7968 aa3.26□□□□□ -1.89
LINC01440-203ENST00000596828 AHNAK2Q8IVF2 5795 aa3.19□□□□□ -1.9
LINC01440-203ENST00000596828 KRTAP5-5Q701N2 237 aaPredicted RBP3.18□□□□□ -1.9
LINC01440-203ENST00000596828 CDC42SE1Q9NRR8 79 aa3.18□□□□□ -1.9
LINC01440-203ENST00000596828 KRTAP20-2Q3LI61 65 aa3.15□□□□□ -1.91
LINC01440-203ENST00000596828 KRTAP5-10Q6L8G5 202 aa3.14□□□□□ -1.91
LINC01440-203ENST00000596828 ROMO1P60602 79 aa3.13□□□□□ -1.91
LINC01440-203ENST00000596828 KTN1-AS1Q86SY8 53 aa3.13□□□□□ -1.91
LINC01440-203ENST00000596828 KRTAP12-4P60329 112 aa3.12□□□□□ -1.91
LINC01440-203ENST00000596828 RPS28P62857 69 aaKnown RBP3.11□□□□□ -1.91
LINC01440-203ENST00000596828 SYNE1Q8NF91 8797 aaKnown RBP3.08□□□□□ -1.92
LINC01440-203ENST00000596828 KRTAP6-1Q3LI64 71 aa3□□□□□ -1.93
LINC01440-203ENST00000596828 KRTAP5-7Q6L8G8 165 aa3□□□□□ -1.93
LINC01440-203ENST00000596828 MT1AP04731 61 aa2.98□□□□□ -1.93
LINC01440-203ENST00000596828 LCE3DQ9BYE3 92 aa2.97□□□□□ -1.93
LINC01440-203ENST00000596828 KRTAP5-2Q701N4 177 aa2.89□□□□□ -1.95
LINC01440-203ENST00000596828 KRTAP6-2Q3LI66 62 aa2.86□□□□□ -1.95
LINC01440-203ENST00000596828 BRK1Q8WUW1 75 aa2.8□□□□□ -1.96
LINC01440-203ENST00000596828 KRTAP5-8O75690 187 aa2.77□□□□□ -1.97
LINC01440-203ENST00000596828 LCE1CQ5T751 118 aa2.72□□□□□ -1.97
LINC01440-203ENST00000596828 LCE1BQ5T7P3 118 aa2.72□□□□□ -1.97
LINC01440-203ENST00000596828 MUC5ACP98088 5654 aa2.59□□□□□ -1.99
LINC01440-203ENST00000596828 MUC5BQ9HC84 5762 aaPredicted RBP2.59□□□□□ -1.99
LINC01440-203ENST00000596828 AHNAKQ09666 5890 aaKnown RBP2.58□□□□□ -2
LINC01440-203ENST00000596828 INE1O15225 51 aa2.49□□□□□ -2.01
LINC01440-203ENST00000596828 MUC19Q7Z5P9 8384 aa2.27□□□□□ -2.05
LINC01440-203ENST00000596828 KRTAP21-2Q3LI59 83 aa1.95□□□□□ -2.1
LINC01440-203ENST00000596828 PHGR1C9JFL3 82 aa1.86□□□□□ -2.11
LINC01440-203ENST00000596828 PRM1P04553 51 aa1.63□□□□□ -2.15
LINC01440-203ENST00000596828 KRTAP21-1Q3LI58 79 aa1.37□□□□□ -2.19
LINC01440-203ENST00000596828 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 44.7 ms