RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 LCE5AQ5TCM9 118 aa5.54□□□□□ -1.52
SMCO4-206ENST00000596676 KRTAP23-1A1A580 65 aa5.52□□□□□ -1.53
SMCO4-206ENST00000596676 KRTAP20-1Q3LI63 56 aa5.51□□□□□ -1.53
SMCO4-206ENST00000596676 KRTAP2-3P0C7H8 128 aa5.46□□□□□ -1.54
SMCO4-206ENST00000596676 MT1GP13640 62 aa5.46□□□□□ -1.54
SMCO4-206ENST00000596676 KRTAP2-4Q9BYR9 128 aa5.46□□□□□ -1.54
SMCO4-206ENST00000596676 MT1MQ8N339 61 aa5.43□□□□□ -1.54
SMCO4-206ENST00000596676 DSTQ03001 7570 aaKnown RBP5.42□□□□□ -1.54
SMCO4-206ENST00000596676 PMAIP1Q13794 54 aa5.4□□□□□ -1.54
SMCO4-206ENST00000596676 KRTAP4-7Q9BYR0 210 aa5.4□□□□□ -1.54
SMCO4-206ENST00000596676 KRTAP4-3Q9BYR4 195 aa5.4□□□□□ -1.54
SMCO4-206ENST00000596676 LCE3BQ5TA77 95 aa5.39□□□□□ -1.55
SMCO4-206ENST00000596676 PP632Q6XCG6 107 aa5.39□□□□□ -1.55
SMCO4-206ENST00000596676 KRTAP15-1Q3LI76 137 aa5.34□□□□□ -1.55
SMCO4-206ENST00000596676 PRO0628Q9UI54 55 aa5.32□□□□□ -1.56
SMCO4-206ENST00000596676 KRTAP2-2Q9BYT5 123 aa5.3□□□□□ -1.56
SMCO4-206ENST00000596676 KRTAP2-1Q9BYU5 128 aa5.3□□□□□ -1.56
SMCO4-206ENST00000596676 PRAC1Q96KF2 57 aa5.21□□□□□ -1.58
SMCO4-206ENST00000596676 LCE3CQ5T5A8 94 aa5.18□□□□□ -1.58
SMCO4-206ENST00000596676 KRTAP19-4Q3LI73 84 aa5.12□□□□□ -1.59
SMCO4-206ENST00000596676 LOC100996750A0A140TA64 210 aa5.08□□□□□ -1.6
SMCO4-206ENST00000596676 KTN1-AS1Q86SY8 53 aa4.99□□□□□ -1.61
SMCO4-206ENST00000596676 KRTAP4-9Q9BYQ8 210 aa4.98□□□□□ -1.61
SMCO4-206ENST00000596676 KRTAP9-6A8MVA2 160 aa4.96□□□□□ -1.62
SMCO4-206ENST00000596676 KRTAP5-5Q701N2 237 aaPredicted RBP4.93□□□□□ -1.62
SMCO4-206ENST00000596676 KRTAP5-4Q6L8H1 288 aa4.92□□□□□ -1.62
SMCO4-206ENST00000596676 LCE4AQ5TA78 99 aa4.9□□□□□ -1.63
SMCO4-206ENST00000596676 MT4P47944 62 aa4.89□□□□□ -1.63
SMCO4-206ENST00000596676 LCE1DQ5T752 114 aa4.87□□□□□ -1.63
SMCO4-206ENST00000596676 KRTAP4-6Q9BYQ5 205 aa4.81□□□□□ -1.64
SMCO4-206ENST00000596676 HMCN1Q96RW7 5635 aa4.78□□□□□ -1.64
SMCO4-206ENST00000596676 SVIPQ8NHG7 77 aa4.76□□□□□ -1.65
SMCO4-206ENST00000596676 SYNE1Q8NF91 8797 aaKnown RBP4.75□□□□□ -1.65
SMCO4-206ENST00000596676 KRTAP6-1Q3LI64 71 aa4.71□□□□□ -1.66
SMCO4-206ENST00000596676 MT1AP04731 61 aa4.7□□□□□ -1.66
SMCO4-206ENST00000596676 SPRR5A0A1B0GTR4 108 aa4.65□□□□□ -1.67
SMCO4-206ENST00000596676 KRTAP12-4P60329 112 aa4.65□□□□□ -1.67
SMCO4-206ENST00000596676 KRTAP20-2Q3LI61 65 aa4.64□□□□□ -1.67
SMCO4-206ENST00000596676 AHNAK2Q8IVF2 5795 aa4.53□□□□□ -1.68
SMCO4-206ENST00000596676 KRTAP9-4Q9BYQ2 154 aa4.51□□□□□ -1.69
SMCO4-206ENST00000596676 KRTAP5-3Q6L8H2 238 aa4.49□□□□□ -1.69
SMCO4-206ENST00000596676 GPR98Q8WXG9 6306 aa4.48□□□□□ -1.69
SMCO4-206ENST00000596676 KRTAP6-2Q3LI66 62 aa4.41□□□□□ -1.7
SMCO4-206ENST00000596676 KRTAP5-2Q701N4 177 aa4.38□□□□□ -1.71
SMCO4-206ENST00000596676 KRTAP5-10Q6L8G5 202 aa4.3□□□□□ -1.72
SMCO4-206ENST00000596676 MT3P25713 68 aa4.26□□□□□ -1.73
SMCO4-206ENST00000596676 LUZP6Q538Z0 58 aa4.17□□□□□ -1.74
SMCO4-206ENST00000596676 OBSCNQ5VST9 7968 aa4.16□□□□□ -1.74
SMCO4-206ENST00000596676 KRTAP4-11Q9BYQ6 195 aa4.12□□□□□ -1.75
SMCO4-206ENST00000596676 KRTAP5-7Q6L8G8 165 aa4.05□□□□□ -1.76
SMCO4-206ENST00000596676 KRTAP5-8O75690 187 aa3.99□□□□□ -1.77
SMCO4-206ENST00000596676 KRTAP5-1Q6L8H4 278 aa3.88□□□□□ -1.79
SMCO4-206ENST00000596676 NDUFAF8A1L188 74 aa3.83□□□□□ -1.8
SMCO4-206ENST00000596676 MUC5ACP98088 5654 aa3.81□□□□□ -1.8
SMCO4-206ENST00000596676 LCE3DQ9BYE3 92 aa3.8□□□□□ -1.8
SMCO4-206ENST00000596676 LCE1EQ5T753 118 aa3.78□□□□□ -1.8
SMCO4-206ENST00000596676 KRTAP9-9Q9BYP9 154 aa3.67□□□□□ -1.82
SMCO4-206ENST00000596676 LCE3EQ5T5B0 92 aa3.63□□□□□ -1.83
SMCO4-206ENST00000596676 LCE1BQ5T7P3 118 aa3.63□□□□□ -1.83
SMCO4-206ENST00000596676 MUC5BQ9HC84 5762 aaPredicted RBP3.63□□□□□ -1.83
SMCO4-206ENST00000596676 KRTAP4-2Q9BYR5 136 aa3.62□□□□□ -1.83
SMCO4-206ENST00000596676 AHNAKQ09666 5890 aaKnown RBP3.61□□□□□ -1.83
SMCO4-206ENST00000596676 LCE1CQ5T751 118 aa3.53□□□□□ -1.84
SMCO4-206ENST00000596676 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.24□□□□□ -1.89
SMCO4-206ENST00000596676 KRTAP4-12Q9BQ66 201 aa3.2□□□□□ -1.9
SMCO4-206ENST00000596676 KRTAP5-11Q6L8G4 156 aa3.16□□□□□ -1.9
SMCO4-206ENST00000596676 A0A0A0MQY5 61 aa3.12□□□□□ -1.91
SMCO4-206ENST00000596676 KRTAP21-2Q3LI59 83 aa3.08□□□□□ -1.92
SMCO4-206ENST00000596676 INE1O15225 51 aa3.04□□□□□ -1.92
SMCO4-206ENST00000596676 PRM1P04553 51 aa2.99□□□□□ -1.93
SMCO4-206ENST00000596676 LCE1FQ5T754 118 aa2.93□□□□□ -1.94
SMCO4-206ENST00000596676 KRTAP4-4Q9BYR3 166 aa2.85□□□□□ -1.95
SMCO4-206ENST00000596676 PHGR1C9JFL3 82 aa2.74□□□□□ -1.97
SMCO4-206ENST00000596676 MUC19Q7Z5P9 8384 aa2.53□□□□□ -2
SMCO4-206ENST00000596676 H3BS24 57 aa2.47□□□□□ -2.01
SMCO4-206ENST00000596676 KRTAP21-1Q3LI58 79 aa1.83□□□□□ -2.12
SMCO4-206ENST00000596676 MUC16Q8WXI7 14507 aa1.78□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 38.9 ms