RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 LCE1DQ5T752 114 aa4.57□□□□□ -1.68
LIG1-212ENST00000596549 KRTAP4-3Q9BYR4 195 aa4.57□□□□□ -1.68
LIG1-212ENST00000596549 PRR15LQ9BU68 103 aa4.56□□□□□ -1.68
LIG1-212ENST00000596549 LINC01558Q9Y6Z2 57 aa4.56□□□□□ -1.68
LIG1-212ENST00000596549 LCE4AQ5TA78 99 aa4.52□□□□□ -1.69
LIG1-212ENST00000596549 HMCN1Q96RW7 5635 aa4.5□□□□□ -1.69
LIG1-212ENST00000596549 MT4P47944 62 aa4.5□□□□□ -1.69
LIG1-212ENST00000596549 AHNAK2Q8IVF2 5795 aa4.5□□□□□ -1.69
LIG1-212ENST00000596549 KRTAP5-7Q6L8G8 165 aa4.49□□□□□ -1.69
LIG1-212ENST00000596549 KRTAP5-4Q6L8H1 288 aa4.47□□□□□ -1.69
LIG1-212ENST00000596549 TMEM258P61165 79 aa4.46□□□□□ -1.7
LIG1-212ENST00000596549 KRTAP4-7Q9BYR0 210 aa4.45□□□□□ -1.7
LIG1-212ENST00000596549 KRTAP12-3P60328 96 aa4.44□□□□□ -1.7
LIG1-212ENST00000596549 UQCR11O14957 56 aa4.43□□□□□ -1.7
LIG1-212ENST00000596549 KRTAP4-6Q9BYQ5 205 aa4.38□□□□□ -1.71
LIG1-212ENST00000596549 MIR22HGQ0VDD5 57 aa4.33□□□□□ -1.72
LIG1-212ENST00000596549 SPRR5A0A1B0GTR4 108 aa4.31□□□□□ -1.72
LIG1-212ENST00000596549 KRTAP25-1Q3LHN0 102 aa4.3□□□□□ -1.72
LIG1-212ENST00000596549 KRTAP5-3Q6L8H2 238 aa4.3□□□□□ -1.72
LIG1-212ENST00000596549 KRTAP5-5Q701N2 237 aaPredicted RBP4.3□□□□□ -1.72
LIG1-212ENST00000596549 PSPHP1O15172 72 aa4.23□□□□□ -1.73
LIG1-212ENST00000596549 KRTAP20-2Q3LI61 65 aa4.22□□□□□ -1.73
LIG1-212ENST00000596549 LOC100996750A0A140TA64 210 aa4.21□□□□□ -1.74
LIG1-212ENST00000596549 K7ERS5 55 aa4.2□□□□□ -1.74
LIG1-212ENST00000596549 Q1T7F1 81 aa4.2□□□□□ -1.74
LIG1-212ENST00000596549 V9GYY9 64 aa4.18□□□□□ -1.74
LIG1-212ENST00000596549 KRTAP23-1A1A580 65 aa4.13□□□□□ -1.75
LIG1-212ENST00000596549 KRTAP15-1Q3LI76 137 aa4.12□□□□□ -1.75
LIG1-212ENST00000596549 KRTAP19-4Q3LI73 84 aa4.11□□□□□ -1.75
LIG1-212ENST00000596549 KRTAP12-4P60329 112 aa4.1□□□□□ -1.75
LIG1-212ENST00000596549 SYNE1Q8NF91 8797 aaKnown RBP4.09□□□□□ -1.76
LIG1-212ENST00000596549 LCE3CQ5T5A8 94 aa4.08□□□□□ -1.76
LIG1-212ENST00000596549 A6NED7 52 aa4.06□□□□□ -1.76
LIG1-212ENST00000596549 RPS28P62857 69 aaKnown RBP4.06□□□□□ -1.76
LIG1-212ENST00000596549 CDC42SE1Q9NRR8 79 aa4.02□□□□□ -1.77
LIG1-212ENST00000596549 ROMO1P60602 79 aa3.96□□□□□ -1.78
LIG1-212ENST00000596549 MT1AP04731 61 aa3.95□□□□□ -1.78
LIG1-212ENST00000596549 KRTAP6-1Q3LI64 71 aa3.95□□□□□ -1.78
LIG1-212ENST00000596549 KRTAP9-6A8MVA2 160 aa3.92□□□□□ -1.78
LIG1-212ENST00000596549 KRTAP5-2Q701N4 177 aa3.92□□□□□ -1.78
LIG1-212ENST00000596549 AHNAKQ09666 5890 aaKnown RBP3.91□□□□□ -1.78
LIG1-212ENST00000596549 PRO0628Q9UI54 55 aa3.9□□□□□ -1.79
LIG1-212ENST00000596549 MUC5ACP98088 5654 aa3.85□□□□□ -1.79
LIG1-212ENST00000596549 KRTAP4-11Q9BYQ6 195 aa3.83□□□□□ -1.8
LIG1-212ENST00000596549 MUC5BQ9HC84 5762 aaPredicted RBP3.82□□□□□ -1.8
LIG1-212ENST00000596549 H3BS24 57 aa3.81□□□□□ -1.8
LIG1-212ENST00000596549 KRTAP9-4Q9BYQ2 154 aa3.8□□□□□ -1.8
LIG1-212ENST00000596549 KRTAP6-2Q3LI66 62 aa3.76□□□□□ -1.81
LIG1-212ENST00000596549 KRTAP5-8O75690 187 aa3.74□□□□□ -1.81
LIG1-212ENST00000596549 PMAIP1Q13794 54 aa3.72□□□□□ -1.81
LIG1-212ENST00000596549 A0A0A0MQY5 61 aa3.7□□□□□ -1.82
LIG1-212ENST00000596549 OBSCNQ5VST9 7968 aa3.65□□□□□ -1.83
LIG1-212ENST00000596549 KRTAP9-9Q9BYP9 154 aa3.59□□□□□ -1.83
LIG1-212ENST00000596549 MT3P25713 68 aa3.58□□□□□ -1.84
LIG1-212ENST00000596549 BRK1Q8WUW1 75 aa3.58□□□□□ -1.84
LIG1-212ENST00000596549 KRTAP5-1Q6L8H4 278 aa3.52□□□□□ -1.85
LIG1-212ENST00000596549 KTN1-AS1Q86SY8 53 aa3.5□□□□□ -1.85
LIG1-212ENST00000596549 LCE1EQ5T753 118 aa3.31□□□□□ -1.88
LIG1-212ENST00000596549 KRTAP4-12Q9BQ66 201 aa3.3□□□□□ -1.88
LIG1-212ENST00000596549 KRTAP4-2Q9BYR5 136 aa3.19□□□□□ -1.9
LIG1-212ENST00000596549 PRAC1Q96KF2 57 aa3.15□□□□□ -1.91
LIG1-212ENST00000596549 LCE1BQ5T7P3 118 aa3.12□□□□□ -1.91
LIG1-212ENST00000596549 LCE1CQ5T751 118 aa3.08□□□□□ -1.92
LIG1-212ENST00000596549 LUZP6Q538Z0 58 aa3.06□□□□□ -1.92
LIG1-212ENST00000596549 LCE3DQ9BYE3 92 aa2.91□□□□□ -1.94
LIG1-212ENST00000596549 NDUFAF8A1L188 74 aa2.87□□□□□ -1.95
LIG1-212ENST00000596549 KRTAP5-11Q6L8G4 156 aa2.82□□□□□ -1.96
LIG1-212ENST00000596549 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.82□□□□□ -1.96
LIG1-212ENST00000596549 LCE3EQ5T5B0 92 aa2.73□□□□□ -1.97
LIG1-212ENST00000596549 LCE1FQ5T754 118 aa2.71□□□□□ -1.98
LIG1-212ENST00000596549 PHGR1C9JFL3 82 aa2.67□□□□□ -1.98
LIG1-212ENST00000596549 KRTAP21-2Q3LI59 83 aa2.6□□□□□ -1.99
LIG1-212ENST00000596549 INE1O15225 51 aa2.43□□□□□ -2.02
LIG1-212ENST00000596549 KRTAP4-4Q9BYR3 166 aa2.39□□□□□ -2.03
LIG1-212ENST00000596549 MUC19Q7Z5P9 8384 aa2.22□□□□□ -2.05
LIG1-212ENST00000596549 PRM1P04553 51 aa2.05□□□□□ -2.08
LIG1-212ENST00000596549 KRTAP21-1Q3LI58 79 aa2.05□□□□□ -2.08
LIG1-212ENST00000596549 MUC16Q8WXI7 14507 aa1.58□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 13.3 ms