RNA–Protein interactions for RNA: ENST00000595560.1

ZNF550-207, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 565 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-207ENST00000595560 MT1GP13640 62 aa5.69□□□□□ -1.5
ZNF550-207ENST00000595560 LCE3AQ5TA76 89 aa5.69□□□□□ -1.5
ZNF550-207ENST00000595560 A6NED7 52 aa5.67□□□□□ -1.5
ZNF550-207ENST00000595560 PP632Q6XCG6 107 aa5.65□□□□□ -1.5
ZNF550-207ENST00000595560 MT1LQ93083 61 aa5.63□□□□□ -1.51
ZNF550-207ENST00000595560 MT1MQ8N339 61 aa5.59□□□□□ -1.51
ZNF550-207ENST00000595560 K7ERS5 55 aa5.58□□□□□ -1.52
ZNF550-207ENST00000595560 CDC42SE1Q9NRR8 79 aa5.51□□□□□ -1.53
ZNF550-207ENST00000595560 KRTAP12-3P60328 96 aa5.48□□□□□ -1.53
ZNF550-207ENST00000595560 KRTAP25-1Q3LHN0 102 aa5.46□□□□□ -1.54
ZNF550-207ENST00000595560 KRTAP4-9Q9BYQ8 210 aa5.45□□□□□ -1.54
ZNF550-207ENST00000595560 KRTAP4-3Q9BYR4 195 aa5.43□□□□□ -1.54
ZNF550-207ENST00000595560 LCE4AQ5TA78 99 aa5.39□□□□□ -1.55
ZNF550-207ENST00000595560 LCE1DQ5T752 114 aa5.36□□□□□ -1.55
ZNF550-207ENST00000595560 KRTAP4-7Q9BYR0 210 aa5.33□□□□□ -1.56
ZNF550-207ENST00000595560 KRTAP5-4Q6L8H1 288 aa5.31□□□□□ -1.56
ZNF550-207ENST00000595560 MT4P47944 62 aa5.29□□□□□ -1.56
ZNF550-207ENST00000595560 GPR98Q8WXG9 6306 aa5.29□□□□□ -1.56
ZNF550-207ENST00000595560 HMCN1Q96RW7 5635 aa5.28□□□□□ -1.56
ZNF550-207ENST00000595560 KRTAP23-1A1A580 65 aa5.28□□□□□ -1.56
ZNF550-207ENST00000595560 ROMO1P60602 79 aa5.27□□□□□ -1.57
ZNF550-207ENST00000595560 BRK1Q8WUW1 75 aa5.27□□□□□ -1.57
ZNF550-207ENST00000595560 KRTAP19-4Q3LI73 84 aa5.21□□□□□ -1.58
ZNF550-207ENST00000595560 KRTAP4-6Q9BYQ5 205 aa5.16□□□□□ -1.58
ZNF550-207ENST00000595560 KRTAP15-1Q3LI76 137 aa5.14□□□□□ -1.59
ZNF550-207ENST00000595560 KRTAP5-5Q701N2 237 aaPredicted RBP5.14□□□□□ -1.59
ZNF550-207ENST00000595560 AHNAK2Q8IVF2 5795 aa5.06□□□□□ -1.6
ZNF550-207ENST00000595560 LCE3CQ5T5A8 94 aa5.06□□□□□ -1.6
ZNF550-207ENST00000595560 LOC100996750A0A140TA64 210 aa5.05□□□□□ -1.6
ZNF550-207ENST00000595560 SPRR5A0A1B0GTR4 108 aa5□□□□□ -1.61
ZNF550-207ENST00000595560 KRTAP20-2Q3LI61 65 aa5□□□□□ -1.61
ZNF550-207ENST00000595560 KRTAP12-4P60329 112 aa4.97□□□□□ -1.61
ZNF550-207ENST00000595560 KRTAP5-10Q6L8G5 202 aa4.96□□□□□ -1.62
ZNF550-207ENST00000595560 PMAIP1Q13794 54 aa4.95□□□□□ -1.62
ZNF550-207ENST00000595560 PRO0628Q9UI54 55 aa4.92□□□□□ -1.62
ZNF550-207ENST00000595560 SYNE1Q8NF91 8797 aaKnown RBP4.88□□□□□ -1.63
ZNF550-207ENST00000595560 KRTAP5-3Q6L8H2 238 aa4.86□□□□□ -1.63
ZNF550-207ENST00000595560 MT1AP04731 61 aa4.79□□□□□ -1.64
ZNF550-207ENST00000595560 KRTAP9-6A8MVA2 160 aa4.77□□□□□ -1.65
ZNF550-207ENST00000595560 KRTAP5-7Q6L8G8 165 aa4.77□□□□□ -1.65
ZNF550-207ENST00000595560 KRTAP6-1Q3LI64 71 aa4.75□□□□□ -1.65
ZNF550-207ENST00000595560 PRAC1Q96KF2 57 aa4.7□□□□□ -1.66
ZNF550-207ENST00000595560 KRTAP5-2Q701N4 177 aa4.67□□□□□ -1.66
ZNF550-207ENST00000595560 KTN1-AS1Q86SY8 53 aa4.64□□□□□ -1.67
ZNF550-207ENST00000595560 KRTAP9-4Q9BYQ2 154 aa4.61□□□□□ -1.67
ZNF550-207ENST00000595560 KRTAP4-11Q9BYQ6 195 aa4.55□□□□□ -1.68
ZNF550-207ENST00000595560 KRTAP6-2Q3LI66 62 aa4.53□□□□□ -1.68
ZNF550-207ENST00000595560 KRTAP5-8O75690 187 aa4.39□□□□□ -1.71
ZNF550-207ENST00000595560 SVIPQ8NHG7 77 aa4.39□□□□□ -1.71
ZNF550-207ENST00000595560 MT3P25713 68 aa4.38□□□□□ -1.71
ZNF550-207ENST00000595560 OBSCNQ5VST9 7968 aa4.33□□□□□ -1.72
ZNF550-207ENST00000595560 KRTAP5-1Q6L8H4 278 aa4.17□□□□□ -1.74
ZNF550-207ENST00000595560 MUC5BQ9HC84 5762 aaPredicted RBP4.16□□□□□ -1.74
ZNF550-207ENST00000595560 KRTAP9-9Q9BYP9 154 aa4.15□□□□□ -1.75
ZNF550-207ENST00000595560 MUC5ACP98088 5654 aa4.15□□□□□ -1.75
ZNF550-207ENST00000595560 AHNAKQ09666 5890 aaKnown RBP4.13□□□□□ -1.75
ZNF550-207ENST00000595560 LCE1EQ5T753 118 aa4.03□□□□□ -1.76
ZNF550-207ENST00000595560 LUZP6Q538Z0 58 aa3.91□□□□□ -1.78
ZNF550-207ENST00000595560 KRTAP4-2Q9BYR5 136 aa3.78□□□□□ -1.8
ZNF550-207ENST00000595560 LCE1CQ5T751 118 aa3.74□□□□□ -1.81
ZNF550-207ENST00000595560 LCE1BQ5T7P3 118 aa3.74□□□□□ -1.81
ZNF550-207ENST00000595560 LCE3DQ9BYE3 92 aa3.65□□□□□ -1.83
ZNF550-207ENST00000595560 NDUFAF8A1L188 74 aa3.48□□□□□ -1.85
ZNF550-207ENST00000595560 LCE3EQ5T5B0 92 aa3.44□□□□□ -1.86
ZNF550-207ENST00000595560 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.42□□□□□ -1.86
ZNF550-207ENST00000595560 KRTAP5-11Q6L8G4 156 aa3.38□□□□□ -1.87
ZNF550-207ENST00000595560 KRTAP4-12Q9BQ66 201 aa3.37□□□□□ -1.87
ZNF550-207ENST00000595560 LCE1FQ5T754 118 aa3.27□□□□□ -1.89
ZNF550-207ENST00000595560 KRTAP21-2Q3LI59 83 aa3.14□□□□□ -1.91
ZNF550-207ENST00000595560 A0A0A0MQY5 61 aa2.94□□□□□ -1.94
ZNF550-207ENST00000595560 PHGR1C9JFL3 82 aa2.92□□□□□ -1.94
ZNF550-207ENST00000595560 INE1O15225 51 aa2.87□□□□□ -1.95
ZNF550-207ENST00000595560 KRTAP4-4Q9BYR3 166 aa2.83□□□□□ -1.96
ZNF550-207ENST00000595560 PRM1P04553 51 aa2.72□□□□□ -1.97
ZNF550-207ENST00000595560 MUC19Q7Z5P9 8384 aa2.66□□□□□ -1.98
ZNF550-207ENST00000595560 H3BS24 57 aa2.58□□□□□ -2
ZNF550-207ENST00000595560 KRTAP21-1Q3LI58 79 aa2.19□□□□□ -2.06
ZNF550-207ENST00000595560 MUC16Q8WXI7 14507 aa1.91□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 238.9 ms