RNA–Protein interactions for RNA: ENST00000594724.5

USE1-205, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-205ENST00000594724 TNP1P09430 55 aa5.34□□□□□ -1.55
USE1-205ENST00000594724 LCE3AQ5TA76 89 aa5.32□□□□□ -1.56
USE1-205ENST00000594724 MT1GP13640 62 aa5.31□□□□□ -1.56
USE1-205ENST00000594724 UQCR11O14957 56 aa5.29□□□□□ -1.56
USE1-205ENST00000594724 DSTQ03001 7570 aaKnown RBP5.28□□□□□ -1.56
USE1-205ENST00000594724 MT1LQ93083 61 aa5.26□□□□□ -1.57
USE1-205ENST00000594724 PP632Q6XCG6 107 aa5.24□□□□□ -1.57
USE1-205ENST00000594724 MT1MQ8N339 61 aa5.22□□□□□ -1.57
USE1-205ENST00000594724 MIR22HGQ0VDD5 57 aa5.18□□□□□ -1.58
USE1-205ENST00000594724 KRTAP5-3Q6L8H2 238 aa5.14□□□□□ -1.59
USE1-205ENST00000594724 KRTAP4-3Q9BYR4 195 aa5.14□□□□□ -1.59
USE1-205ENST00000594724 PSPHP1O15172 72 aa5.12□□□□□ -1.59
USE1-205ENST00000594724 KRTAP4-11Q9BYQ6 195 aa5.12□□□□□ -1.59
USE1-205ENST00000594724 KRTAP12-3P60328 96 aa5.1□□□□□ -1.59
USE1-205ENST00000594724 V9GYY9 64 aa5.09□□□□□ -1.59
USE1-205ENST00000594724 Q1T7F1 81 aa5.07□□□□□ -1.6
USE1-205ENST00000594724 K7ERS5 55 aa5.05□□□□□ -1.6
USE1-205ENST00000594724 KRTAP25-1Q3LHN0 102 aa5.04□□□□□ -1.6
USE1-205ENST00000594724 LCE4AQ5TA78 99 aa5.02□□□□□ -1.61
USE1-205ENST00000594724 MT4P47944 62 aa5□□□□□ -1.61
USE1-205ENST00000594724 KRTAP5-4Q6L8H1 288 aa4.94□□□□□ -1.62
USE1-205ENST00000594724 A6NED7 52 aa4.93□□□□□ -1.62
USE1-205ENST00000594724 HMCN1Q96RW7 5635 aa4.87□□□□□ -1.63
USE1-205ENST00000594724 GPR98Q8WXG9 6306 aa4.85□□□□□ -1.63
USE1-205ENST00000594724 KRTAP23-1A1A580 65 aa4.83□□□□□ -1.64
USE1-205ENST00000594724 RPS28P62857 69 aaKnown RBP4.81□□□□□ -1.64
USE1-205ENST00000594724 CDC42SE1Q9NRR8 79 aa4.8□□□□□ -1.64
USE1-205ENST00000594724 PCP4P48539 62 aa4.79□□□□□ -1.64
USE1-205ENST00000594724 KRTAP15-1Q3LI76 137 aa4.78□□□□□ -1.64
USE1-205ENST00000594724 KRTAP5-5Q701N2 237 aaPredicted RBP4.77□□□□□ -1.65
USE1-205ENST00000594724 KRTAP19-4Q3LI73 84 aa4.76□□□□□ -1.65
USE1-205ENST00000594724 ROMO1P60602 79 aa4.73□□□□□ -1.65
USE1-205ENST00000594724 LCE3CQ5T5A8 94 aa4.71□□□□□ -1.66
USE1-205ENST00000594724 KRTAP20-2Q3LI61 65 aa4.67□□□□□ -1.66
USE1-205ENST00000594724 AHNAK2Q8IVF2 5795 aa4.66□□□□□ -1.66
USE1-205ENST00000594724 KRTAP5-10Q6L8G5 202 aa4.65□□□□□ -1.67
USE1-205ENST00000594724 KRTAP12-4P60329 112 aa4.64□□□□□ -1.67
USE1-205ENST00000594724 SPRR5A0A1B0GTR4 108 aa4.63□□□□□ -1.67
USE1-205ENST00000594724 H3BS24 57 aa4.61□□□□□ -1.67
USE1-205ENST00000594724 SYNE1Q8NF91 8797 aaKnown RBP4.57□□□□□ -1.68
USE1-205ENST00000594724 KRTAP9-6A8MVA2 160 aa4.46□□□□□ -1.7
USE1-205ENST00000594724 MT1AP04731 61 aa4.46□□□□□ -1.7
USE1-205ENST00000594724 KRTAP6-1Q3LI64 71 aa4.46□□□□□ -1.7
USE1-205ENST00000594724 KRTAP5-7Q6L8G8 165 aa4.44□□□□□ -1.7
USE1-205ENST00000594724 KRTAP5-2Q701N4 177 aa4.33□□□□□ -1.72
USE1-205ENST00000594724 KRTAP6-2Q3LI66 62 aa4.25□□□□□ -1.73
USE1-205ENST00000594724 BRK1Q8WUW1 75 aa4.25□□□□□ -1.73
USE1-205ENST00000594724 KRTAP5-8O75690 187 aa4.11□□□□□ -1.75
USE1-205ENST00000594724 MT3P25713 68 aa4.08□□□□□ -1.76
USE1-205ENST00000594724 OBSCNQ5VST9 7968 aa4.07□□□□□ -1.76
USE1-205ENST00000594724 PMAIP1Q13794 54 aa3.99□□□□□ -1.77
USE1-205ENST00000594724 KRTAP5-1Q6L8H4 278 aa3.89□□□□□ -1.79
USE1-205ENST00000594724 PRAC1Q96KF2 57 aa3.88□□□□□ -1.79
USE1-205ENST00000594724 MUC5ACP98088 5654 aa3.8□□□□□ -1.8
USE1-205ENST00000594724 MUC5BQ9HC84 5762 aaPredicted RBP3.8□□□□□ -1.8
USE1-205ENST00000594724 AHNAKQ09666 5890 aaKnown RBP3.76□□□□□ -1.81
USE1-205ENST00000594724 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.73□□□□□ -1.81
USE1-205ENST00000594724 LCE1EQ5T753 118 aa3.72□□□□□ -1.81
USE1-205ENST00000594724 PRO0628Q9UI54 55 aa3.66□□□□□ -1.82
USE1-205ENST00000594724 LCE1BQ5T7P3 118 aa3.55□□□□□ -1.84
USE1-205ENST00000594724 KTN1-AS1Q86SY8 53 aa3.51□□□□□ -1.85
USE1-205ENST00000594724 KRTAP5-11Q6L8G4 156 aa3.47□□□□□ -1.85
USE1-205ENST00000594724 LCE1CQ5T751 118 aa3.45□□□□□ -1.86
USE1-205ENST00000594724 SVIPQ8NHG7 77 aa3.4□□□□□ -1.87
USE1-205ENST00000594724 LCE3DQ9BYE3 92 aa3.4□□□□□ -1.87
USE1-205ENST00000594724 LUZP6Q538Z0 58 aa3.23□□□□□ -1.89
USE1-205ENST00000594724 LCE3EQ5T5B0 92 aa3.2□□□□□ -1.9
USE1-205ENST00000594724 KRTAP4-4Q9BYR3 166 aa3.13□□□□□ -1.91
USE1-205ENST00000594724 LCE1FQ5T754 118 aa3.02□□□□□ -1.93
USE1-205ENST00000594724 KRTAP21-2Q3LI59 83 aa2.93□□□□□ -1.94
USE1-205ENST00000594724 PHGR1C9JFL3 82 aa2.71□□□□□ -1.98
USE1-205ENST00000594724 NDUFAF8A1L188 74 aa2.59□□□□□ -1.99
USE1-205ENST00000594724 MUC19Q7Z5P9 8384 aa2.5□□□□□ -2.01
USE1-205ENST00000594724 PRM1P04553 51 aa2.44□□□□□ -2.02
USE1-205ENST00000594724 A0A0A0MQY5 61 aa2.43□□□□□ -2.02
USE1-205ENST00000594724 INE1O15225 51 aa2.16□□□□□ -2.06
USE1-205ENST00000594724 KRTAP21-1Q3LI58 79 aa2.03□□□□□ -2.08
USE1-205ENST00000594724 MUC16Q8WXI7 14507 aa1.77□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 31 ms