RNA–Protein interactions for RNA: ENST00000594258.1

ARHGEF1-207, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 919 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-207ENST00000594258 LCE4AQ5TA78 99 aa6.81□□□□□ -1.32
ARHGEF1-207ENST00000594258 KRTAP4-3Q9BYR4 195 aa6.81□□□□□ -1.32
ARHGEF1-207ENST00000594258 LCE1DQ5T752 114 aa6.8□□□□□ -1.32
ARHGEF1-207ENST00000594258 KRTAP12-3P60328 96 aa6.77□□□□□ -1.33
ARHGEF1-207ENST00000594258 MIR22HGQ0VDD5 57 aa6.73□□□□□ -1.33
ARHGEF1-207ENST00000594258 MT4P47944 62 aa6.7□□□□□ -1.34
ARHGEF1-207ENST00000594258 KRTAP5-4Q6L8H1 288 aa6.7□□□□□ -1.34
ARHGEF1-207ENST00000594258 KRTAP25-1Q3LHN0 102 aa6.66□□□□□ -1.34
ARHGEF1-207ENST00000594258 KRTAP4-7Q9BYR0 210 aa6.65□□□□□ -1.34
ARHGEF1-207ENST00000594258 GPR98Q8WXG9 6306 aa6.64□□□□□ -1.35
ARHGEF1-207ENST00000594258 V9GYY9 64 aa6.61□□□□□ -1.35
ARHGEF1-207ENST00000594258 K7ERS5 55 aa6.6□□□□□ -1.35
ARHGEF1-207ENST00000594258 HMCN1Q96RW7 5635 aa6.6□□□□□ -1.35
ARHGEF1-207ENST00000594258 PSPHP1O15172 72 aa6.57□□□□□ -1.36
ARHGEF1-207ENST00000594258 Q1T7F1 81 aa6.57□□□□□ -1.36
ARHGEF1-207ENST00000594258 KRTAP4-6Q9BYQ5 205 aa6.52□□□□□ -1.37
ARHGEF1-207ENST00000594258 KRTAP5-5Q701N2 237 aaPredicted RBP6.44□□□□□ -1.38
ARHGEF1-207ENST00000594258 KRTAP23-1A1A580 65 aa6.43□□□□□ -1.38
ARHGEF1-207ENST00000594258 KRTAP19-4Q3LI73 84 aa6.42□□□□□ -1.38
ARHGEF1-207ENST00000594258 A6NED7 52 aa6.35□□□□□ -1.39
ARHGEF1-207ENST00000594258 KRTAP5-10Q6L8G5 202 aa6.34□□□□□ -1.39
ARHGEF1-207ENST00000594258 AHNAK2Q8IVF2 5795 aa6.32□□□□□ -1.4
ARHGEF1-207ENST00000594258 KRTAP15-1Q3LI76 137 aa6.31□□□□□ -1.4
ARHGEF1-207ENST00000594258 LOC100996750A0A140TA64 210 aa6.3□□□□□ -1.4
ARHGEF1-207ENST00000594258 KRTAP20-2Q3LI61 65 aa6.3□□□□□ -1.4
ARHGEF1-207ENST00000594258 SPRR5A0A1B0GTR4 108 aa6.29□□□□□ -1.4
ARHGEF1-207ENST00000594258 PCP4P48539 62 aa6.29□□□□□ -1.4
ARHGEF1-207ENST00000594258 CDC42SE1Q9NRR8 79 aa6.26□□□□□ -1.41
ARHGEF1-207ENST00000594258 KRTAP12-4P60329 112 aa6.23□□□□□ -1.41
ARHGEF1-207ENST00000594258 LCE3CQ5T5A8 94 aa6.23□□□□□ -1.41
ARHGEF1-207ENST00000594258 KRTAP5-3Q6L8H2 238 aa6.19□□□□□ -1.42
ARHGEF1-207ENST00000594258 RPS28P62857 69 aaKnown RBP6.18□□□□□ -1.42
ARHGEF1-207ENST00000594258 ROMO1P60602 79 aa6.16□□□□□ -1.42
ARHGEF1-207ENST00000594258 KRTAP5-7Q6L8G8 165 aa6.09□□□□□ -1.43
ARHGEF1-207ENST00000594258 SYNE1Q8NF91 8797 aaKnown RBP6.02□□□□□ -1.45
ARHGEF1-207ENST00000594258 MT1AP04731 61 aa5.98□□□□□ -1.45
ARHGEF1-207ENST00000594258 KRTAP6-1Q3LI64 71 aa5.93□□□□□ -1.46
ARHGEF1-207ENST00000594258 KRTAP9-6A8MVA2 160 aa5.89□□□□□ -1.47
ARHGEF1-207ENST00000594258 KRTAP5-2Q701N4 177 aa5.87□□□□□ -1.47
ARHGEF1-207ENST00000594258 KRTAP9-4Q9BYQ2 154 aa5.76□□□□□ -1.49
ARHGEF1-207ENST00000594258 KRTAP4-11Q9BYQ6 195 aa5.75□□□□□ -1.49
ARHGEF1-207ENST00000594258 KRTAP6-2Q3LI66 62 aa5.65□□□□□ -1.5
ARHGEF1-207ENST00000594258 KRTAP5-8O75690 187 aa5.57□□□□□ -1.52
ARHGEF1-207ENST00000594258 MT3P25713 68 aa5.46□□□□□ -1.54
ARHGEF1-207ENST00000594258 BRK1Q8WUW1 75 aa5.39□□□□□ -1.55
ARHGEF1-207ENST00000594258 OBSCNQ5VST9 7968 aa5.38□□□□□ -1.55
ARHGEF1-207ENST00000594258 KRTAP9-9Q9BYP9 154 aa5.26□□□□□ -1.57
ARHGEF1-207ENST00000594258 KRTAP5-1Q6L8H4 278 aa5.25□□□□□ -1.57
ARHGEF1-207ENST00000594258 MUC5ACP98088 5654 aa5.23□□□□□ -1.57
ARHGEF1-207ENST00000594258 MUC5BQ9HC84 5762 aaPredicted RBP5.2□□□□□ -1.58
ARHGEF1-207ENST00000594258 AHNAKQ09666 5890 aaKnown RBP5.15□□□□□ -1.59
ARHGEF1-207ENST00000594258 PMAIP1Q13794 54 aa5.05□□□□□ -1.6
ARHGEF1-207ENST00000594258 LCE1EQ5T753 118 aa5.03□□□□□ -1.6
ARHGEF1-207ENST00000594258 PRO0628Q9UI54 55 aa5□□□□□ -1.61
ARHGEF1-207ENST00000594258 PRAC1Q96KF2 57 aa4.89□□□□□ -1.63
ARHGEF1-207ENST00000594258 KRTAP4-2Q9BYR5 136 aa4.76□□□□□ -1.65
ARHGEF1-207ENST00000594258 LCE1BQ5T7P3 118 aa4.69□□□□□ -1.66
ARHGEF1-207ENST00000594258 KTN1-AS1Q86SY8 53 aa4.68□□□□□ -1.66
ARHGEF1-207ENST00000594258 LCE1CQ5T751 118 aa4.67□□□□□ -1.66
ARHGEF1-207ENST00000594258 SVIPQ8NHG7 77 aa4.49□□□□□ -1.69
ARHGEF1-207ENST00000594258 LCE3DQ9BYE3 92 aa4.48□□□□□ -1.69
ARHGEF1-207ENST00000594258 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.26□□□□□ -1.73
ARHGEF1-207ENST00000594258 KRTAP4-12Q9BQ66 201 aa4.26□□□□□ -1.73
ARHGEF1-207ENST00000594258 KRTAP5-11Q6L8G4 156 aa4.24□□□□□ -1.73
ARHGEF1-207ENST00000594258 LCE3EQ5T5B0 92 aa4.21□□□□□ -1.74
ARHGEF1-207ENST00000594258 LUZP6Q538Z0 58 aa4.14□□□□□ -1.75
ARHGEF1-207ENST00000594258 LCE1FQ5T754 118 aa4.12□□□□□ -1.75
ARHGEF1-207ENST00000594258 KRTAP21-2Q3LI59 83 aa3.92□□□□□ -1.78
ARHGEF1-207ENST00000594258 PHGR1C9JFL3 82 aa3.67□□□□□ -1.82
ARHGEF1-207ENST00000594258 NDUFAF8A1L188 74 aa3.6□□□□□ -1.83
ARHGEF1-207ENST00000594258 KRTAP4-4Q9BYR3 166 aa3.55□□□□□ -1.84
ARHGEF1-207ENST00000594258 MUC19Q7Z5P9 8384 aa3.29□□□□□ -1.88
ARHGEF1-207ENST00000594258 PRM1P04553 51 aa3.14□□□□□ -1.91
ARHGEF1-207ENST00000594258 A0A0A0MQY5 61 aa3.12□□□□□ -1.91
ARHGEF1-207ENST00000594258 INE1O15225 51 aa2.95□□□□□ -1.94
ARHGEF1-207ENST00000594258 KRTAP21-1Q3LI58 79 aa2.8□□□□□ -1.96
ARHGEF1-207ENST00000594258 H3BS24 57 aa2.75□□□□□ -1.97
ARHGEF1-207ENST00000594258 MUC16Q8WXI7 14507 aa2.39□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 11.3 ms