RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 MT1LQ93083 61 aa5.41□□□□□ -1.54
VRK3-207ENST00000594092 KRTAP6-3Q3LI67 103 aa5.4□□□□□ -1.54
VRK3-207ENST00000594092 SPRR5A0A1B0GTR4 108 aa5.37□□□□□ -1.55
VRK3-207ENST00000594092 KRTAP19-4Q3LI73 84 aa5.33□□□□□ -1.56
VRK3-207ENST00000594092 KRTAP19-3Q7Z4W3 81 aa5.33□□□□□ -1.56
VRK3-207ENST00000594092 A0A0A0MQY5 61 aa5.32□□□□□ -1.56
VRK3-207ENST00000594092 MDN1Q9NU22 5596 aa5.32□□□□□ -1.56
VRK3-207ENST00000594092 LCE3CQ5T5A8 94 aa5.32□□□□□ -1.56
VRK3-207ENST00000594092 MT1GP13640 62 aa5.27□□□□□ -1.57
VRK3-207ENST00000594092 KRTAP9-7A8MTY7 169 aa5.27□□□□□ -1.57
VRK3-207ENST00000594092 LCE1AQ5T7P2 110 aa5.27□□□□□ -1.57
VRK3-207ENST00000594092 LCE5AQ5TCM9 118 aa5.25□□□□□ -1.57
VRK3-207ENST00000594092 KRTAP4-7Q9BYR0 210 aa5.24□□□□□ -1.57
VRK3-207ENST00000594092 SPRR2EP22531 72 aa5.23□□□□□ -1.57
VRK3-207ENST00000594092 SPRR2BP35325 72 aa5.23□□□□□ -1.57
VRK3-207ENST00000594092 SPRR2AP35326 72 aa5.23□□□□□ -1.57
VRK3-207ENST00000594092 MT1MQ8N339 61 aa5.22□□□□□ -1.57
VRK3-207ENST00000594092 KRTAP4-3Q9BYR4 195 aa5.12□□□□□ -1.59
VRK3-207ENST00000594092 SPRR2DP22532 72 aa5.04□□□□□ -1.6
VRK3-207ENST00000594092 KRTAP9-6A8MVA2 160 aa5.02□□□□□ -1.61
VRK3-207ENST00000594092 NEBP20929 6669 aa5□□□□□ -1.61
VRK3-207ENST00000594092 DSTQ03001 7570 aaKnown RBP4.94□□□□□ -1.62
VRK3-207ENST00000594092 LOC100996750A0A140TA64 210 aa4.93□□□□□ -1.62
VRK3-207ENST00000594092 INE1O15225 51 aa4.85□□□□□ -1.63
VRK3-207ENST00000594092 LCE3BQ5TA77 95 aa4.85□□□□□ -1.63
VRK3-207ENST00000594092 KRTAP2-3P0C7H8 128 aa4.73□□□□□ -1.65
VRK3-207ENST00000594092 KRTAP2-4Q9BYR9 128 aa4.73□□□□□ -1.65
VRK3-207ENST00000594092 KRTAP5-5Q701N2 237 aaPredicted RBP4.72□□□□□ -1.65
VRK3-207ENST00000594092 KRTAP20-1Q3LI63 56 aa4.67□□□□□ -1.66
VRK3-207ENST00000594092 KRTAP2-1Q9BYU5 128 aa4.65□□□□□ -1.66
VRK3-207ENST00000594092 KRTAP2-2Q9BYT5 123 aa4.63□□□□□ -1.67
VRK3-207ENST00000594092 MT1AP04731 61 aa4.6□□□□□ -1.67
VRK3-207ENST00000594092 KRTAP6-1Q3LI64 71 aa4.57□□□□□ -1.68
VRK3-207ENST00000594092 KRTAP5-4Q6L8H1 288 aa4.54□□□□□ -1.68
VRK3-207ENST00000594092 SYNE1Q8NF91 8797 aaKnown RBP4.49□□□□□ -1.69
VRK3-207ENST00000594092 LCE4AQ5TA78 99 aa4.46□□□□□ -1.69
VRK3-207ENST00000594092 KRTAP12-4P60329 112 aa4.39□□□□□ -1.71
VRK3-207ENST00000594092 MT4P47944 62 aa4.38□□□□□ -1.71
VRK3-207ENST00000594092 KRTAP9-4Q9BYQ2 154 aa4.37□□□□□ -1.71
VRK3-207ENST00000594092 KRTAP4-9Q9BYQ8 210 aa4.37□□□□□ -1.71
VRK3-207ENST00000594092 KRTAP4-6Q9BYQ5 205 aa4.35□□□□□ -1.71
VRK3-207ENST00000594092 LCE1DQ5T752 114 aa4.32□□□□□ -1.72
VRK3-207ENST00000594092 HMCN1Q96RW7 5635 aa4.29□□□□□ -1.72
VRK3-207ENST00000594092 KRTAP20-2Q3LI61 65 aa4.25□□□□□ -1.73
VRK3-207ENST00000594092 KRTAP6-2Q3LI66 62 aa4.21□□□□□ -1.74
VRK3-207ENST00000594092 MT3P25713 68 aa4.16□□□□□ -1.74
VRK3-207ENST00000594092 KRTAP5-2Q701N4 177 aa4.11□□□□□ -1.75
VRK3-207ENST00000594092 KRTAP5-3Q6L8H2 238 aa4.1□□□□□ -1.75
VRK3-207ENST00000594092 LCE3DQ9BYE3 92 aa4□□□□□ -1.77
VRK3-207ENST00000594092 LCE3EQ5T5B0 92 aa3.91□□□□□ -1.78
VRK3-207ENST00000594092 AHNAK2Q8IVF2 5795 aa3.85□□□□□ -1.79
VRK3-207ENST00000594092 OBSCNQ5VST9 7968 aa3.81□□□□□ -1.8
VRK3-207ENST00000594092 GPR98Q8WXG9 6306 aa3.75□□□□□ -1.81
VRK3-207ENST00000594092 KRTAP4-11Q9BYQ6 195 aa3.71□□□□□ -1.82
VRK3-207ENST00000594092 KRTAP5-10Q6L8G5 202 aa3.64□□□□□ -1.83
VRK3-207ENST00000594092 LCE1EQ5T753 118 aa3.63□□□□□ -1.83
VRK3-207ENST00000594092 KRTAP5-8O75690 187 aa3.57□□□□□ -1.84
VRK3-207ENST00000594092 KRTAP5-1Q6L8H4 278 aa3.57□□□□□ -1.84
VRK3-207ENST00000594092 KRTAP4-12Q9BQ66 201 aa3.53□□□□□ -1.84
VRK3-207ENST00000594092 MUC5ACP98088 5654 aa3.46□□□□□ -1.86
VRK3-207ENST00000594092 KRTAP5-7Q6L8G8 165 aa3.44□□□□□ -1.86
VRK3-207ENST00000594092 KRTAP9-9Q9BYP9 154 aa3.43□□□□□ -1.86
VRK3-207ENST00000594092 PRM1P04553 51 aa3.42□□□□□ -1.86
VRK3-207ENST00000594092 LCE1BQ5T7P3 118 aa3.42□□□□□ -1.86
VRK3-207ENST00000594092 KRTAP4-2Q9BYR5 136 aa3.41□□□□□ -1.86
VRK3-207ENST00000594092 LCE1CQ5T751 118 aa3.39□□□□□ -1.87
VRK3-207ENST00000594092 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.16□□□□□ -1.9
VRK3-207ENST00000594092 MUC5BQ9HC84 5762 aaPredicted RBP3.09□□□□□ -1.91
VRK3-207ENST00000594092 KRTAP5-11Q6L8G4 156 aa3□□□□□ -1.93
VRK3-207ENST00000594092 KRTAP21-2Q3LI59 83 aa2.99□□□□□ -1.93
VRK3-207ENST00000594092 AHNAKQ09666 5890 aaKnown RBP2.92□□□□□ -1.94
VRK3-207ENST00000594092 LCE1FQ5T754 118 aa2.72□□□□□ -1.97
VRK3-207ENST00000594092 KRTAP4-4Q9BYR3 166 aa2.67□□□□□ -1.98
VRK3-207ENST00000594092 PHGR1C9JFL3 82 aa2.58□□□□□ -2
VRK3-207ENST00000594092 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
VRK3-207ENST00000594092 KRTAP21-1Q3LI58 79 aa2.19□□□□□ -2.06
VRK3-207ENST00000594092 MUC16Q8WXI7 14507 aa1.71□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 131 ms