RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 MT1LQ93083 61 aa7.42□□□□□ -1.22
PNKP-203ENST00000593946 SYNE2Q8WXH0 6885 aaKnown RBP7.39□□□□□ -1.23
PNKP-203ENST00000593946 MUC12Q9UKN1 5478 aa7.38□□□□□ -1.23
PNKP-203ENST00000593946 KRTAP6-3Q3LI67 103 aa7.37□□□□□ -1.23
PNKP-203ENST00000593946 KRTAP19-3Q7Z4W3 81 aa7.31□□□□□ -1.24
PNKP-203ENST00000593946 KRTAP19-4Q3LI73 84 aa7.3□□□□□ -1.24
PNKP-203ENST00000593946 A0A0A0MQY5 61 aa7.27□□□□□ -1.25
PNKP-203ENST00000593946 SPRR5A0A1B0GTR4 108 aa7.27□□□□□ -1.25
PNKP-203ENST00000593946 LCE3CQ5T5A8 94 aa7.26□□□□□ -1.25
PNKP-203ENST00000593946 MT1GP13640 62 aa7.23□□□□□ -1.25
PNKP-203ENST00000593946 LCE5AQ5TCM9 118 aa7.21□□□□□ -1.26
PNKP-203ENST00000593946 LCE1AQ5T7P2 110 aa7.2□□□□□ -1.26
PNKP-203ENST00000593946 KRTAP4-7Q9BYR0 210 aa7.15□□□□□ -1.26
PNKP-203ENST00000593946 MT1MQ8N339 61 aa7.15□□□□□ -1.27
PNKP-203ENST00000593946 MDN1Q9NU22 5596 aa7.14□□□□□ -1.27
PNKP-203ENST00000593946 SPRR2EP22531 72 aa7.13□□□□□ -1.27
PNKP-203ENST00000593946 SPRR2BP35325 72 aa7.13□□□□□ -1.27
PNKP-203ENST00000593946 SPRR2AP35326 72 aa7.13□□□□□ -1.27
PNKP-203ENST00000593946 KRTAP4-3Q9BYR4 195 aa6.99□□□□□ -1.29
PNKP-203ENST00000593946 NEBP20929 6669 aa6.91□□□□□ -1.3
PNKP-203ENST00000593946 KRTAP9-6A8MVA2 160 aa6.88□□□□□ -1.31
PNKP-203ENST00000593946 SPRR2DP22532 72 aa6.87□□□□□ -1.31
PNKP-203ENST00000593946 KRTAP20-1Q3LI63 56 aa6.83□□□□□ -1.32
PNKP-203ENST00000593946 DSTQ03001 7570 aaKnown RBP6.74□□□□□ -1.33
PNKP-203ENST00000593946 LOC100996750A0A140TA64 210 aa6.73□□□□□ -1.33
PNKP-203ENST00000593946 INE1O15225 51 aa6.63□□□□□ -1.35
PNKP-203ENST00000593946 KRTAP2-3P0C7H8 128 aa6.63□□□□□ -1.35
PNKP-203ENST00000593946 KRTAP2-4Q9BYR9 128 aa6.63□□□□□ -1.35
PNKP-203ENST00000593946 LCE3BQ5TA77 95 aa6.62□□□□□ -1.35
PNKP-203ENST00000593946 KRTAP5-5Q701N2 237 aaPredicted RBP6.47□□□□□ -1.37
PNKP-203ENST00000593946 KRTAP2-2Q9BYT5 123 aa6.42□□□□□ -1.38
PNKP-203ENST00000593946 KRTAP2-1Q9BYU5 128 aa6.42□□□□□ -1.38
PNKP-203ENST00000593946 MT1AP04731 61 aa6.3□□□□□ -1.4
PNKP-203ENST00000593946 KRTAP6-1Q3LI64 71 aa6.25□□□□□ -1.41
PNKP-203ENST00000593946 KRTAP5-4Q6L8H1 288 aa6.23□□□□□ -1.41
PNKP-203ENST00000593946 LCE4AQ5TA78 99 aa6.11□□□□□ -1.43
PNKP-203ENST00000593946 SYNE1Q8NF91 8797 aaKnown RBP6.04□□□□□ -1.44
PNKP-203ENST00000593946 KRTAP12-4P60329 112 aa6□□□□□ -1.45
PNKP-203ENST00000593946 KRTAP9-4Q9BYQ2 154 aa5.99□□□□□ -1.45
PNKP-203ENST00000593946 MT4P47944 62 aa5.96□□□□□ -1.45
PNKP-203ENST00000593946 KRTAP4-6Q9BYQ5 205 aa5.93□□□□□ -1.46
PNKP-203ENST00000593946 KRTAP4-9Q9BYQ8 210 aa5.93□□□□□ -1.46
PNKP-203ENST00000593946 LCE1DQ5T752 114 aa5.9□□□□□ -1.47
PNKP-203ENST00000593946 KRTAP20-2Q3LI61 65 aa5.82□□□□□ -1.48
PNKP-203ENST00000593946 HMCN1Q96RW7 5635 aa5.79□□□□□ -1.48
PNKP-203ENST00000593946 KRTAP6-2Q3LI66 62 aa5.77□□□□□ -1.49
PNKP-203ENST00000593946 MT3P25713 68 aa5.7□□□□□ -1.5
PNKP-203ENST00000593946 GPR98Q8WXG9 6306 aa5.65□□□□□ -1.51
PNKP-203ENST00000593946 KRTAP5-2Q701N4 177 aa5.64□□□□□ -1.51
PNKP-203ENST00000593946 KRTAP5-3Q6L8H2 238 aa5.62□□□□□ -1.51
PNKP-203ENST00000593946 LCE3DQ9BYE3 92 aa5.43□□□□□ -1.54
PNKP-203ENST00000593946 KRTAP5-10Q6L8G5 202 aa5.33□□□□□ -1.56
PNKP-203ENST00000593946 AHNAK2Q8IVF2 5795 aa5.33□□□□□ -1.56
PNKP-203ENST00000593946 LCE3EQ5T5B0 92 aa5.26□□□□□ -1.57
PNKP-203ENST00000593946 OBSCNQ5VST9 7968 aa5.2□□□□□ -1.58
PNKP-203ENST00000593946 KRTAP5-7Q6L8G8 165 aa5.15□□□□□ -1.58
PNKP-203ENST00000593946 KRTAP4-11Q9BYQ6 195 aa5.06□□□□□ -1.6
PNKP-203ENST00000593946 LCE1EQ5T753 118 aa5□□□□□ -1.61
PNKP-203ENST00000593946 KRTAP5-8O75690 187 aa4.89□□□□□ -1.63
PNKP-203ENST00000593946 KRTAP5-1Q6L8H4 278 aa4.89□□□□□ -1.63
PNKP-203ENST00000593946 KRTAP4-2Q9BYR5 136 aa4.67□□□□□ -1.66
PNKP-203ENST00000593946 LCE1CQ5T751 118 aa4.66□□□□□ -1.66
PNKP-203ENST00000593946 LCE1BQ5T7P3 118 aa4.66□□□□□ -1.66
PNKP-203ENST00000593946 MUC5ACP98088 5654 aa4.61□□□□□ -1.67
PNKP-203ENST00000593946 PRM1P04553 51 aa4.6□□□□□ -1.67
PNKP-203ENST00000593946 KRTAP9-9Q9BYP9 154 aa4.44□□□□□ -1.7
PNKP-203ENST00000593946 MUC5BQ9HC84 5762 aaPredicted RBP4.41□□□□□ -1.7
PNKP-203ENST00000593946 AHNAKQ09666 5890 aaKnown RBP4.38□□□□□ -1.71
PNKP-203ENST00000593946 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.36□□□□□ -1.71
PNKP-203ENST00000593946 KRTAP5-11Q6L8G4 156 aa4.13□□□□□ -1.75
PNKP-203ENST00000593946 KRTAP21-2Q3LI59 83 aa4.1□□□□□ -1.75
PNKP-203ENST00000593946 KRTAP4-12Q9BQ66 201 aa3.88□□□□□ -1.79
PNKP-203ENST00000593946 LCE1FQ5T754 118 aa3.74□□□□□ -1.81
PNKP-203ENST00000593946 KRTAP4-4Q9BYR3 166 aa3.63□□□□□ -1.83
PNKP-203ENST00000593946 PHGR1C9JFL3 82 aa3.54□□□□□ -1.84
PNKP-203ENST00000593946 MUC19Q7Z5P9 8384 aa3.1□□□□□ -1.91
PNKP-203ENST00000593946 KRTAP21-1Q3LI58 79 aa2.99□□□□□ -1.93
PNKP-203ENST00000593946 MUC16Q8WXI7 14507 aa2.27□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 6 ms