RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 C9orf118A6NHY6 69 aa0.37□□□□□ -2.35
VRK3-204ENST00000593912 VAMP8Q9BV40 100 aa0.37□□□□□ -2.35
VRK3-204ENST00000593912 UBL5Q9BZL1 73 aa0.37□□□□□ -2.35
VRK3-204ENST00000593912 TSTD3H0UI37 97 aa0.36□□□□□ -2.35
VRK3-204ENST00000593912 SCGB1A1P11684 91 aa0.36□□□□□ -2.35
VRK3-204ENST00000593912 CHKB-CPT1BH3BT56 60 aa0.35□□□□□ -2.35
VRK3-204ENST00000593912 NDUFA5Q16718 116 aa0.35□□□□□ -2.35
VRK3-204ENST00000593912 SPANXA2-OT1Q8N9U9 137 aa0.35□□□□□ -2.35
VRK3-204ENST00000593912 LCE3DQ9BYE3 92 aa0.34□□□□□ -2.36
VRK3-204ENST00000593912 A0A1B0GU33 70 aa0.33□□□□□ -2.36
VRK3-204ENST00000593912 SPATA45Q537H7 98 aa0.33□□□□□ -2.36
VRK3-204ENST00000593912 TAX1BP3O14907 124 aa0.32□□□□□ -2.36
VRK3-204ENST00000593912 HSD52Q0P140 79 aa0.32□□□□□ -2.36
VRK3-204ENST00000593912 MP68P56378 58 aa0.31□□□□□ -2.36
VRK3-204ENST00000593912 SMIM26A0A096LP01 95 aa0.3□□□□□ -2.36
VRK3-204ENST00000593912 H3BT86 120 aa0.28□□□□□ -2.36
VRK3-204ENST00000593912 SERP1Q9Y6X1 66 aa0.28□□□□□ -2.36
VRK3-204ENST00000593912 H7BZZ5 65 aa0.27□□□□□ -2.37
VRK3-204ENST00000593912 OCR1Q9BZK8 76 aa0.27□□□□□ -2.37
VRK3-204ENST00000593912 S100A2P29034 98 aa0.26□□□□□ -2.37
VRK3-204ENST00000593912 SEC61GP60059 68 aa0.26□□□□□ -2.37
VRK3-204ENST00000593912 KRTAP23-1A1A580 65 aa0.25□□□□□ -2.37
VRK3-204ENST00000593912 HIST1H4AP62805 103 aaKnown RBP0.25□□□□□ -2.37
VRK3-204ENST00000593912 H3BPC8 53 aa0.23□□□□□ -2.37
VRK3-204ENST00000593912 SERP2Q8N6R1 65 aa0.22□□□□□ -2.37
VRK3-204ENST00000593912 S100A6P06703 90 aa0.18□□□□□ -2.38
VRK3-204ENST00000593912 RPS28P62857 69 aaKnown RBP0.17□□□□□ -2.38
VRK3-204ENST00000593912 COA5Q86WW8 74 aa0.16□□□□□ -2.38
VRK3-204ENST00000593912 S100A1P23297 94 aa0.15□□□□□ -2.39
VRK3-204ENST00000593912 UQCR10Q9UDW1 63 aa0.15□□□□□ -2.39
VRK3-204ENST00000593912 PRR15LQ9BU68 103 aa0.14□□□□□ -2.39
VRK3-204ENST00000593912 PRO0461Q9UI25 63 aa0.14□□□□□ -2.39
VRK3-204ENST00000593912 A0A1B0GU69 56 aa0.13□□□□□ -2.39
VRK3-204ENST00000593912 ATP5EP2Q5VTU8 51 aa0.13□□□□□ -2.39
VRK3-204ENST00000593912 M0R143 59 aa0.11□□□□□ -2.39
VRK3-204ENST00000593912 SNURFQ9Y675 71 aa0.1□□□□□ -2.39
VRK3-204ENST00000593912 PYY3Q5JQD4 70 aa0.09□□□□□ -2.4
VRK3-204ENST00000593912 ETDBQ3ZM63 59 aa0.07□□□□□ -2.4
VRK3-204ENST00000593912 LINC00643Q86TS7 51 aa0.03□□□□□ -2.4
VRK3-204ENST00000593912 FAM240AA0A1B0GVK7 77 aa0.01□□□□□ -2.41
VRK3-204ENST00000593912 K7ERS5 55 aa-0.01□□□□□ -2.41
VRK3-204ENST00000593912 PRM1P04553 51 aa-0.02□□□□□ -2.41
VRK3-204ENST00000593912 UQCR11O14957 56 aa-0.03□□□□□ -2.41
VRK3-204ENST00000593912 F8W1H4 67 aa-0.04□□□□□ -2.42
VRK3-204ENST00000593912 MIR22HGQ0VDD5 57 aa-0.04□□□□□ -2.42
VRK3-204ENST00000593912 CDC42SE1Q9NRR8 79 aa-0.04□□□□□ -2.42
VRK3-204ENST00000593912 ROMO1P60602 79 aa-0.05□□□□□ -2.42
VRK3-204ENST00000593912 SMIM20Q8N5G0 67 aa-0.08□□□□□ -2.42
VRK3-204ENST00000593912 Q1T7F1 81 aa-0.1□□□□□ -2.43
VRK3-204ENST00000593912 GTF2H5Q6ZYL4 71 aa-0.1□□□□□ -2.43
VRK3-204ENST00000593912 LINC01558Q9Y6Z2 57 aa-0.1□□□□□ -2.43
VRK3-204ENST00000593912 COL5A1-AS1Q5SY13 56 aa-0.14□□□□□ -2.43
VRK3-204ENST00000593912 TMA7Q9Y2S6 64 aaKnown RBP-0.2□□□□□ -2.44
VRK3-204ENST00000593912 SMIM6P0DI80 62 aa-0.23□□□□□ -2.45
VRK3-204ENST00000593912 PSPHP1O15172 72 aa-0.24□□□□□ -2.45
VRK3-204ENST00000593912 COX7CP15954 63 aa-0.28□□□□□ -2.45
VRK3-204ENST00000593912 A6NED7 52 aa-0.3□□□□□ -2.46
VRK3-204ENST00000593912 J3QR89 54 aa-0.31□□□□□ -2.46
VRK3-204ENST00000593912 A0A1B0GV90 55 aa-0.38□□□□□ -2.47
VRK3-204ENST00000593912 ATP5EP56381 51 aaPredicted RBP-0.38□□□□□ -2.47
VRK3-204ENST00000593912 TMEM258P61165 79 aa-0.41□□□□□ -2.48
VRK3-204ENST00000593912 PCP4L1A6NKN8 68 aa-0.42□□□□□ -2.48
VRK3-204ENST00000593912 V9GYY9 64 aa-0.42□□□□□ -2.48
VRK3-204ENST00000593912 CCDC179H3BU77 68 aa-0.43□□□□□ -2.48
VRK3-204ENST00000593912 LOC105371267A0A1B0GV96 52 aa-0.45□□□□□ -2.48
VRK3-204ENST00000593912 K7ERU9 68 aa-0.48□□□□□ -2.49
VRK3-204ENST00000593912 LUZP6Q538Z0 58 aa-0.48□□□□□ -2.49
VRK3-204ENST00000593912 ANAPC13Q9BS18 74 aa-0.5□□□□□ -2.49
VRK3-204ENST00000593912 PRAC1Q96KF2 57 aa-0.54□□□□□ -2.5
VRK3-204ENST00000593912 NDUFAF8A1L188 74 aa-0.57□□□□□ -2.5
VRK3-204ENST00000593912 BRK1Q8WUW1 75 aa-0.59□□□□□ -2.5
VRK3-204ENST00000593912 PMAIP1Q13794 54 aa-0.76□□□□□ -2.53
VRK3-204ENST00000593912 SVIPQ8NHG7 77 aa-0.81□□□□□ -2.54
VRK3-204ENST00000593912 INE1O15225 51 aa-0.85□□□□□ -2.55
VRK3-204ENST00000593912 KTN1-AS1Q86SY8 53 aa-0.97□□□□□ -2.56
VRK3-204ENST00000593912 A0A0A0MQY5 61 aa-1.02□□□□□ -2.57
VRK3-204ENST00000593912 PRO0628Q9UI54 55 aa-1.16□□□□□ -2.6
VRK3-204ENST00000593912 PCP4P48539 62 aa-1.24□□□□□ -2.61
Retrieved 78 of 20,778 RNA–protein pairs in 728.8 ms