RNA–Protein interactions for RNA: ENST00000593678.5

GTF2F1-202, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 2

Gene GTF2F1, Length 1,705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-202ENST00000593678 KRTAP9-7A8MTY7 169 aa5.26□□□□□ -1.57
GTF2F1-202ENST00000593678 LCE3CQ5T5A8 94 aa5.26□□□□□ -1.57
GTF2F1-202ENST00000593678 KRTAP5-9P26371 169 aa5.25□□□□□ -1.57
GTF2F1-202ENST00000593678 MUC12Q9UKN1 5478 aa5.25□□□□□ -1.57
GTF2F1-202ENST00000593678 KRTAP19-3Q7Z4W3 81 aa5.23□□□□□ -1.57
GTF2F1-202ENST00000593678 SPRR5A0A1B0GTR4 108 aa5.2□□□□□ -1.58
GTF2F1-202ENST00000593678 LUZP6Q538Z0 58 aa5.2□□□□□ -1.58
GTF2F1-202ENST00000593678 MT1GP13640 62 aa5.19□□□□□ -1.58
GTF2F1-202ENST00000593678 KRTAP6-3Q3LI67 103 aa5.18□□□□□ -1.58
GTF2F1-202ENST00000593678 LCE5AQ5TCM9 118 aa5.11□□□□□ -1.59
GTF2F1-202ENST00000593678 SPRR2EP22531 72 aa5.1□□□□□ -1.59
GTF2F1-202ENST00000593678 SPRR2BP35325 72 aa5.1□□□□□ -1.59
GTF2F1-202ENST00000593678 SPRR2AP35326 72 aa5.1□□□□□ -1.59
GTF2F1-202ENST00000593678 KRTAP4-7Q9BYR0 210 aa5.1□□□□□ -1.59
GTF2F1-202ENST00000593678 MDN1Q9NU22 5596 aa5.1□□□□□ -1.59
GTF2F1-202ENST00000593678 MT1MQ8N339 61 aa5.09□□□□□ -1.59
GTF2F1-202ENST00000593678 LCE1AQ5T7P2 110 aa5.07□□□□□ -1.6
GTF2F1-202ENST00000593678 NDUFAF8A1L188 74 aa4.98□□□□□ -1.61
GTF2F1-202ENST00000593678 KRTAP4-3Q9BYR4 195 aa4.96□□□□□ -1.62
GTF2F1-202ENST00000593678 NEBP20929 6669 aa4.92□□□□□ -1.62
GTF2F1-202ENST00000593678 SPRR2DP22532 72 aa4.92□□□□□ -1.62
GTF2F1-202ENST00000593678 KRTAP9-6A8MVA2 160 aa4.89□□□□□ -1.63
GTF2F1-202ENST00000593678 DSTQ03001 7570 aaKnown RBP4.89□□□□□ -1.63
GTF2F1-202ENST00000593678 LOC100996750A0A140TA64 210 aa4.8□□□□□ -1.64
GTF2F1-202ENST00000593678 LCE3BQ5TA77 95 aa4.71□□□□□ -1.66
GTF2F1-202ENST00000593678 KRTAP20-1Q3LI63 56 aa4.6□□□□□ -1.67
GTF2F1-202ENST00000593678 KRTAP2-3P0C7H8 128 aa4.55□□□□□ -1.68
GTF2F1-202ENST00000593678 KRTAP5-5Q701N2 237 aaPredicted RBP4.55□□□□□ -1.68
GTF2F1-202ENST00000593678 KRTAP2-4Q9BYR9 128 aa4.55□□□□□ -1.68
GTF2F1-202ENST00000593678 KRTAP2-1Q9BYU5 128 aa4.54□□□□□ -1.68
GTF2F1-202ENST00000593678 MT1AP04731 61 aa4.52□□□□□ -1.69
GTF2F1-202ENST00000593678 KRTAP2-2Q9BYT5 123 aa4.46□□□□□ -1.7
GTF2F1-202ENST00000593678 KRTAP6-1Q3LI64 71 aa4.45□□□□□ -1.7
GTF2F1-202ENST00000593678 KRTAP5-4Q6L8H1 288 aa4.36□□□□□ -1.71
GTF2F1-202ENST00000593678 SYNE1Q8NF91 8797 aaKnown RBP4.35□□□□□ -1.71
GTF2F1-202ENST00000593678 KRTAP12-4P60329 112 aa4.35□□□□□ -1.71
GTF2F1-202ENST00000593678 LCE4AQ5TA78 99 aa4.35□□□□□ -1.71
GTF2F1-202ENST00000593678 KRTAP9-4Q9BYQ2 154 aa4.29□□□□□ -1.72
GTF2F1-202ENST00000593678 MT4P47944 62 aa4.26□□□□□ -1.73
GTF2F1-202ENST00000593678 KRTAP4-6Q9BYQ5 205 aa4.24□□□□□ -1.73
GTF2F1-202ENST00000593678 KRTAP4-9Q9BYQ8 210 aa4.18□□□□□ -1.74
GTF2F1-202ENST00000593678 INE1O15225 51 aa4.15□□□□□ -1.74
GTF2F1-202ENST00000593678 LCE1DQ5T752 114 aa4.15□□□□□ -1.74
GTF2F1-202ENST00000593678 HMCN1Q96RW7 5635 aa4.13□□□□□ -1.75
GTF2F1-202ENST00000593678 MT3P25713 68 aa4.12□□□□□ -1.75
GTF2F1-202ENST00000593678 KRTAP6-2Q3LI66 62 aa4.12□□□□□ -1.75
GTF2F1-202ENST00000593678 KRTAP20-2Q3LI61 65 aa4.11□□□□□ -1.75
GTF2F1-202ENST00000593678 LCE3DQ9BYE3 92 aa3.98□□□□□ -1.77
GTF2F1-202ENST00000593678 KRTAP5-2Q701N4 177 aa3.95□□□□□ -1.78
GTF2F1-202ENST00000593678 KRTAP5-3Q6L8H2 238 aa3.92□□□□□ -1.78
GTF2F1-202ENST00000593678 LCE3EQ5T5B0 92 aa3.86□□□□□ -1.79
GTF2F1-202ENST00000593678 OBSCNQ5VST9 7968 aa3.8□□□□□ -1.8
GTF2F1-202ENST00000593678 GPR98Q8WXG9 6306 aa3.78□□□□□ -1.81
GTF2F1-202ENST00000593678 AHNAK2Q8IVF2 5795 aa3.67□□□□□ -1.82
GTF2F1-202ENST00000593678 KRTAP5-10Q6L8G5 202 aa3.62□□□□□ -1.83
GTF2F1-202ENST00000593678 KRTAP4-12Q9BQ66 201 aa3.61□□□□□ -1.83
GTF2F1-202ENST00000593678 KRTAP9-9Q9BYP9 154 aa3.6□□□□□ -1.83
GTF2F1-202ENST00000593678 KRTAP4-11Q9BYQ6 195 aa3.58□□□□□ -1.84
GTF2F1-202ENST00000593678 LCE1EQ5T753 118 aa3.56□□□□□ -1.84
GTF2F1-202ENST00000593678 KRTAP5-7Q6L8G8 165 aa3.47□□□□□ -1.85
GTF2F1-202ENST00000593678 KRTAP5-1Q6L8H4 278 aa3.41□□□□□ -1.86
GTF2F1-202ENST00000593678 KRTAP5-8O75690 187 aa3.41□□□□□ -1.86
GTF2F1-202ENST00000593678 LCE1BQ5T7P3 118 aa3.38□□□□□ -1.87
GTF2F1-202ENST00000593678 PRM1P04553 51 aa3.34□□□□□ -1.87
GTF2F1-202ENST00000593678 LCE1CQ5T751 118 aa3.32□□□□□ -1.88
GTF2F1-202ENST00000593678 MUC5ACP98088 5654 aa3.32□□□□□ -1.88
GTF2F1-202ENST00000593678 KRTAP4-2Q9BYR5 136 aa3.31□□□□□ -1.88
GTF2F1-202ENST00000593678 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.08□□□□□ -1.92
GTF2F1-202ENST00000593678 MUC5BQ9HC84 5762 aaPredicted RBP3□□□□□ -1.93
GTF2F1-202ENST00000593678 AHNAKQ09666 5890 aaKnown RBP2.97□□□□□ -1.93
GTF2F1-202ENST00000593678 KRTAP5-11Q6L8G4 156 aa2.92□□□□□ -1.94
GTF2F1-202ENST00000593678 KRTAP21-2Q3LI59 83 aa2.9□□□□□ -1.95
GTF2F1-202ENST00000593678 LCE1FQ5T754 118 aa2.65□□□□□ -1.98
GTF2F1-202ENST00000593678 KRTAP4-4Q9BYR3 166 aa2.59□□□□□ -1.99
GTF2F1-202ENST00000593678 PHGR1C9JFL3 82 aa2.51□□□□□ -2.01
GTF2F1-202ENST00000593678 MUC19Q7Z5P9 8384 aa2.27□□□□□ -2.05
GTF2F1-202ENST00000593678 KRTAP21-1Q3LI58 79 aa2.01□□□□□ -2.09
GTF2F1-202ENST00000593678 MUC16Q8WXI7 14507 aa1.55□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 185.4 ms