RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 SERP1Q9Y6X1 66 aa3.7□□□□□ -1.82
USE1-203ENST00000593597 LCE3AQ5TA76 89 aa3.68□□□□□ -1.82
USE1-203ENST00000593597 C10orf95Q9H7T3 257 aa3.67□□□□□ -1.82
USE1-203ENST00000593597 KRTAP4-7Q9BYR0 210 aa3.65□□□□□ -1.83
USE1-203ENST00000593597 A0A1B0GU33 70 aa3.64□□□□□ -1.83
USE1-203ENST00000593597 SMIM26A0A096LP01 95 aa3.63□□□□□ -1.83
USE1-203ENST00000593597 KRTAP5-7Q6L8G8 165 aa3.62□□□□□ -1.83
USE1-203ENST00000593597 KRTAP5-3Q6L8H2 238 aa3.62□□□□□ -1.83
USE1-203ENST00000593597 A8MU10 97 aa3.59□□□□□ -1.83
USE1-203ENST00000593597 SEC61GP60059 68 aa3.59□□□□□ -1.83
USE1-203ENST00000593597 KRTAP20-2Q3LI61 65 aa3.57□□□□□ -1.84
USE1-203ENST00000593597 KRTAP5-5Q701N2 237 aaPredicted RBP3.56□□□□□ -1.84
USE1-203ENST00000593597 SVIPQ8NHG7 77 aa3.53□□□□□ -1.84
USE1-203ENST00000593597 V9GYY9 64 aa3.53□□□□□ -1.84
USE1-203ENST00000593597 TNP1P09430 55 aa3.52□□□□□ -1.85
USE1-203ENST00000593597 Q1T7F1 81 aa3.51□□□□□ -1.85
USE1-203ENST00000593597 KRTAP12-3P60328 96 aa3.49□□□□□ -1.85
USE1-203ENST00000593597 SPRR5A0A1B0GTR4 108 aa3.48□□□□□ -1.85
USE1-203ENST00000593597 SYNE1Q8NF91 8797 aaKnown RBP3.47□□□□□ -1.85
USE1-203ENST00000593597 PSPHP1O15172 72 aa3.47□□□□□ -1.85
USE1-203ENST00000593597 PRR15LQ9BU68 103 aa3.47□□□□□ -1.85
USE1-203ENST00000593597 LOC100996750A0A140TA64 210 aa3.46□□□□□ -1.86
USE1-203ENST00000593597 A0A1B0GU69 56 aa3.46□□□□□ -1.86
USE1-203ENST00000593597 LINC01558Q9Y6Z2 57 aa3.45□□□□□ -1.86
USE1-203ENST00000593597 BRK1Q8WUW1 75 aa3.4□□□□□ -1.87
USE1-203ENST00000593597 A6NED7 52 aa3.39□□□□□ -1.87
USE1-203ENST00000593597 KRTAP12-4P60329 112 aa3.39□□□□□ -1.87
USE1-203ENST00000593597 PRO0628Q9UI54 55 aa3.34□□□□□ -1.87
USE1-203ENST00000593597 UQCR11O14957 56 aa3.31□□□□□ -1.88
USE1-203ENST00000593597 CDC42SE1Q9NRR8 79 aa3.3□□□□□ -1.88
USE1-203ENST00000593597 MIR22HGQ0VDD5 57 aa3.29□□□□□ -1.88
USE1-203ENST00000593597 KRTAP5-2Q701N4 177 aa3.29□□□□□ -1.88
USE1-203ENST00000593597 KRTAP4-11Q9BYQ6 195 aa3.28□□□□□ -1.88
USE1-203ENST00000593597 AHNAKQ09666 5890 aaKnown RBP3.27□□□□□ -1.89
USE1-203ENST00000593597 KRTAP6-1Q3LI64 71 aa3.24□□□□□ -1.89
USE1-203ENST00000593597 MUC5ACP98088 5654 aa3.24□□□□□ -1.89
USE1-203ENST00000593597 MUC5BQ9HC84 5762 aaPredicted RBP3.23□□□□□ -1.89
USE1-203ENST00000593597 KRTAP25-1Q3LHN0 102 aa3.23□□□□□ -1.89
USE1-203ENST00000593597 PMAIP1Q13794 54 aa3.22□□□□□ -1.89
USE1-203ENST00000593597 KRTAP5-8O75690 187 aa3.21□□□□□ -1.9
USE1-203ENST00000593597 MT1AP04731 61 aa3.21□□□□□ -1.9
USE1-203ENST00000593597 LCE3CQ5T5A8 94 aa3.2□□□□□ -1.9
USE1-203ENST00000593597 KRTAP15-1Q3LI76 137 aa3.19□□□□□ -1.9
USE1-203ENST00000593597 KRTAP19-4Q3LI73 84 aa3.18□□□□□ -1.9
USE1-203ENST00000593597 K7ERS5 55 aa3.17□□□□□ -1.9
USE1-203ENST00000593597 OBSCNQ5VST9 7968 aa3.14□□□□□ -1.91
USE1-203ENST00000593597 KRTAP9-6A8MVA2 160 aa3.13□□□□□ -1.91
USE1-203ENST00000593597 KRTAP6-2Q3LI66 62 aa3.11□□□□□ -1.91
USE1-203ENST00000593597 KRTAP9-4Q9BYQ2 154 aa3.11□□□□□ -1.91
USE1-203ENST00000593597 KRTAP23-1A1A580 65 aa3.1□□□□□ -1.91
USE1-203ENST00000593597 KTN1-AS1Q86SY8 53 aa3.08□□□□□ -1.92
USE1-203ENST00000593597 ROMO1P60602 79 aa3.01□□□□□ -1.93
USE1-203ENST00000593597 KRTAP9-9Q9BYP9 154 aa3□□□□□ -1.93
USE1-203ENST00000593597 KRTAP5-1Q6L8H4 278 aa2.99□□□□□ -1.93
USE1-203ENST00000593597 PRAC1Q96KF2 57 aa2.99□□□□□ -1.93
USE1-203ENST00000593597 MT3P25713 68 aa2.9□□□□□ -1.95
USE1-203ENST00000593597 LCE1EQ5T753 118 aa2.72□□□□□ -1.97
USE1-203ENST00000593597 KRTAP4-2Q9BYR5 136 aa2.67□□□□□ -1.98
USE1-203ENST00000593597 LCE1BQ5T7P3 118 aa2.58□□□□□ -2
USE1-203ENST00000593597 A0A0A0MQY5 61 aa2.54□□□□□ -2
USE1-203ENST00000593597 LCE1CQ5T751 118 aa2.54□□□□□ -2
USE1-203ENST00000593597 H3BS24 57 aa2.51□□□□□ -2.01
USE1-203ENST00000593597 LUZP6Q538Z0 58 aa2.47□□□□□ -2.01
USE1-203ENST00000593597 KRTAP4-12Q9BQ66 201 aa2.47□□□□□ -2.01
USE1-203ENST00000593597 NDUFAF8A1L188 74 aa2.44□□□□□ -2.02
USE1-203ENST00000593597 KRTAP5-11Q6L8G4 156 aa2.35□□□□□ -2.03
USE1-203ENST00000593597 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.3□□□□□ -2.04
USE1-203ENST00000593597 LCE1FQ5T754 118 aa2.27□□□□□ -2.05
USE1-203ENST00000593597 LCE3DQ9BYE3 92 aa2.23□□□□□ -2.05
USE1-203ENST00000593597 PHGR1C9JFL3 82 aa2.17□□□□□ -2.06
USE1-203ENST00000593597 KRTAP21-2Q3LI59 83 aa2.14□□□□□ -2.07
USE1-203ENST00000593597 LCE3EQ5T5B0 92 aa2.07□□□□□ -2.08
USE1-203ENST00000593597 INE1O15225 51 aa2□□□□□ -2.09
USE1-203ENST00000593597 KRTAP4-4Q9BYR3 166 aa2□□□□□ -2.09
USE1-203ENST00000593597 MUC19Q7Z5P9 8384 aa1.93□□□□□ -2.1
USE1-203ENST00000593597 KRTAP21-1Q3LI58 79 aa1.62□□□□□ -2.15
USE1-203ENST00000593597 PRM1P04553 51 aa1.57□□□□□ -2.16
USE1-203ENST00000593597 MUC16Q8WXI7 14507 aa1.35□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 29.9 ms