RNA–Protein interactions for RNA: ENST00000593209.5

GHDC-212, Transcript of GH3 domain containing, humanhuman

TSL 5 BASIC

Gene GHDC, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-212ENST00000593209 KRTAP5-9P26371 169 aa6.92□□□□□ -1.3
GHDC-212ENST00000593209 SPRR2FQ96RM1 72 aa6.87□□□□□ -1.31
GHDC-212ENST00000593209 MUC12Q9UKN1 5478 aa6.85□□□□□ -1.31
GHDC-212ENST00000593209 MT1EP04732 61 aa6.78□□□□□ -1.32
GHDC-212ENST00000593209 NEBP20929 6669 aa6.74□□□□□ -1.33
GHDC-212ENST00000593209 MDN1Q9NU22 5596 aa6.71□□□□□ -1.33
GHDC-212ENST00000593209 LCE3CQ5T5A8 94 aa6.7□□□□□ -1.34
GHDC-212ENST00000593209 MT1LQ93083 61 aa6.69□□□□□ -1.34
GHDC-212ENST00000593209 SPRR2EP22531 72 aa6.67□□□□□ -1.34
GHDC-212ENST00000593209 SPRR2BP35325 72 aa6.67□□□□□ -1.34
GHDC-212ENST00000593209 SPRR2AP35326 72 aa6.67□□□□□ -1.34
GHDC-212ENST00000593209 LCE1AQ5T7P2 110 aa6.62□□□□□ -1.35
GHDC-212ENST00000593209 KRTAP4-7Q9BYR0 210 aa6.58□□□□□ -1.36
GHDC-212ENST00000593209 KRTAP19-4Q3LI73 84 aa6.55□□□□□ -1.36
GHDC-212ENST00000593209 INE1O15225 51 aa6.49□□□□□ -1.37
GHDC-212ENST00000593209 KRTAP9-6A8MVA2 160 aa6.47□□□□□ -1.37
GHDC-212ENST00000593209 KRTAP19-3Q7Z4W3 81 aa6.46□□□□□ -1.38
GHDC-212ENST00000593209 SPRR2DP22532 72 aa6.44□□□□□ -1.38
GHDC-212ENST00000593209 KRTAP20-1Q3LI63 56 aa6.41□□□□□ -1.38
GHDC-212ENST00000593209 LCE5AQ5TCM9 118 aa6.39□□□□□ -1.39
GHDC-212ENST00000593209 MT1MQ8N339 61 aa6.37□□□□□ -1.39
GHDC-212ENST00000593209 MT1GP13640 62 aa6.36□□□□□ -1.39
GHDC-212ENST00000593209 KRTAP4-3Q9BYR4 195 aa6.34□□□□□ -1.39
GHDC-212ENST00000593209 KRTAP2-3P0C7H8 128 aa6.32□□□□□ -1.4
GHDC-212ENST00000593209 KRTAP2-4Q9BYR9 128 aa6.32□□□□□ -1.4
GHDC-212ENST00000593209 LCE3BQ5TA77 95 aa6.22□□□□□ -1.41
GHDC-212ENST00000593209 DSTQ03001 7570 aaKnown RBP6.19□□□□□ -1.42
GHDC-212ENST00000593209 LOC100996750A0A140TA64 210 aa6.16□□□□□ -1.42
GHDC-212ENST00000593209 KRTAP2-2Q9BYT5 123 aa6.14□□□□□ -1.43
GHDC-212ENST00000593209 KRTAP2-1Q9BYU5 128 aa6.14□□□□□ -1.43
GHDC-212ENST00000593209 KRTAP4-9Q9BYQ8 210 aa5.76□□□□□ -1.49
GHDC-212ENST00000593209 KRTAP5-5Q701N2 237 aaPredicted RBP5.74□□□□□ -1.49
GHDC-212ENST00000593209 KRTAP6-1Q3LI64 71 aa5.66□□□□□ -1.5
GHDC-212ENST00000593209 MT1AP04731 61 aa5.64□□□□□ -1.51
GHDC-212ENST00000593209 MT4P47944 62 aa5.64□□□□□ -1.51
GHDC-212ENST00000593209 LCE4AQ5TA78 99 aa5.64□□□□□ -1.51
GHDC-212ENST00000593209 KRTAP5-4Q6L8H1 288 aa5.63□□□□□ -1.51
GHDC-212ENST00000593209 LCE1DQ5T752 114 aa5.62□□□□□ -1.51
GHDC-212ENST00000593209 KRTAP4-6Q9BYQ5 205 aa5.52□□□□□ -1.53
GHDC-212ENST00000593209 HMCN1Q96RW7 5635 aa5.49□□□□□ -1.53
GHDC-212ENST00000593209 SYNE1Q8NF91 8797 aaKnown RBP5.47□□□□□ -1.53
GHDC-212ENST00000593209 KRTAP12-4P60329 112 aa5.36□□□□□ -1.55
GHDC-212ENST00000593209 KRTAP9-4Q9BYQ2 154 aa5.34□□□□□ -1.55
GHDC-212ENST00000593209 KRTAP20-2Q3LI61 65 aa5.32□□□□□ -1.56
GHDC-212ENST00000593209 KRTAP6-2Q3LI66 62 aa5.14□□□□□ -1.59
GHDC-212ENST00000593209 KRTAP5-3Q6L8H2 238 aa5.13□□□□□ -1.59
GHDC-212ENST00000593209 AHNAK2Q8IVF2 5795 aa5.12□□□□□ -1.59
GHDC-212ENST00000593209 GPR98Q8WXG9 6306 aa5.11□□□□□ -1.59
GHDC-212ENST00000593209 LCE3DQ9BYE3 92 aa5.07□□□□□ -1.6
GHDC-212ENST00000593209 MT3P25713 68 aa5.05□□□□□ -1.6
GHDC-212ENST00000593209 KRTAP5-2Q701N4 177 aa5.02□□□□□ -1.61
GHDC-212ENST00000593209 LCE3EQ5T5B0 92 aa5.01□□□□□ -1.61
GHDC-212ENST00000593209 KRTAP5-10Q6L8G5 202 aa4.99□□□□□ -1.61
GHDC-212ENST00000593209 OBSCNQ5VST9 7968 aa4.76□□□□□ -1.65
GHDC-212ENST00000593209 KRTAP4-11Q9BYQ6 195 aa4.76□□□□□ -1.65
GHDC-212ENST00000593209 KRTAP5-7Q6L8G8 165 aa4.71□□□□□ -1.66
GHDC-212ENST00000593209 PRM1P04553 51 aa4.66□□□□□ -1.66
GHDC-212ENST00000593209 KRTAP5-8O75690 187 aa4.6□□□□□ -1.67
GHDC-212ENST00000593209 KRTAP5-1Q6L8H4 278 aa4.44□□□□□ -1.7
GHDC-212ENST00000593209 LCE1EQ5T753 118 aa4.4□□□□□ -1.7
GHDC-212ENST00000593209 KRTAP9-9Q9BYP9 154 aa4.27□□□□□ -1.73
GHDC-212ENST00000593209 MUC5ACP98088 5654 aa4.27□□□□□ -1.73
GHDC-212ENST00000593209 LCE1BQ5T7P3 118 aa4.16□□□□□ -1.74
GHDC-212ENST00000593209 KRTAP4-2Q9BYR5 136 aa4.15□□□□□ -1.75
GHDC-212ENST00000593209 MUC5BQ9HC84 5762 aaPredicted RBP4.14□□□□□ -1.75
GHDC-212ENST00000593209 LCE1CQ5T751 118 aa4.11□□□□□ -1.75
GHDC-212ENST00000593209 AHNAKQ09666 5890 aaKnown RBP4.03□□□□□ -1.76
GHDC-212ENST00000593209 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.84□□□□□ -1.8
GHDC-212ENST00000593209 KRTAP21-2Q3LI59 83 aa3.7□□□□□ -1.82
GHDC-212ENST00000593209 KRTAP4-12Q9BQ66 201 aa3.67□□□□□ -1.82
GHDC-212ENST00000593209 KRTAP5-11Q6L8G4 156 aa3.65□□□□□ -1.83
GHDC-212ENST00000593209 LCE1FQ5T754 118 aa3.39□□□□□ -1.87
GHDC-212ENST00000593209 KRTAP4-4Q9BYR3 166 aa3.3□□□□□ -1.88
GHDC-212ENST00000593209 PHGR1C9JFL3 82 aa3.14□□□□□ -1.91
GHDC-212ENST00000593209 KRTAP21-1Q3LI58 79 aa2.99□□□□□ -1.93
GHDC-212ENST00000593209 MUC19Q7Z5P9 8384 aa2.89□□□□□ -1.95
GHDC-212ENST00000593209 MUC16Q8WXI7 14507 aa2.08□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 12.4 ms