RNA–Protein interactions for RNA: ENST00000593174.5

CCDC130-212, Transcript of coiled-coil domain containing 130, humanhuman

TSL 5

Gene CCDC130, Length 1,783 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-212ENST00000593174 KRTAP19-7Q3SYF9 63 aa6.23□□□□□ -1.41
CCDC130-212ENST00000593174 MT1EP04732 61 aa6.14□□□□□ -1.43
CCDC130-212ENST00000593174 MUC12Q9UKN1 5478 aa6.14□□□□□ -1.43
CCDC130-212ENST00000593174 SPRR2FQ96RM1 72 aa6.13□□□□□ -1.43
CCDC130-212ENST00000593174 KRTAP5-9P26371 169 aa6.08□□□□□ -1.44
CCDC130-212ENST00000593174 LCE3CQ5T5A8 94 aa6.06□□□□□ -1.44
CCDC130-212ENST00000593174 KRTAP19-4Q3LI73 84 aa6.05□□□□□ -1.44
CCDC130-212ENST00000593174 NEBP20929 6669 aa6.05□□□□□ -1.44
CCDC130-212ENST00000593174 INE1O15225 51 aa6.02□□□□□ -1.45
CCDC130-212ENST00000593174 MT1LQ93083 61 aa6.01□□□□□ -1.45
CCDC130-212ENST00000593174 MDN1Q9NU22 5596 aa5.95□□□□□ -1.46
CCDC130-212ENST00000593174 KRTAP19-3Q7Z4W3 81 aa5.93□□□□□ -1.46
CCDC130-212ENST00000593174 SPRR2EP22531 72 aa5.88□□□□□ -1.47
CCDC130-212ENST00000593174 SPRR2BP35325 72 aa5.88□□□□□ -1.47
CCDC130-212ENST00000593174 SPRR2AP35326 72 aa5.88□□□□□ -1.47
CCDC130-212ENST00000593174 LCE1AQ5T7P2 110 aa5.88□□□□□ -1.47
CCDC130-212ENST00000593174 MT1GP13640 62 aa5.87□□□□□ -1.47
CCDC130-212ENST00000593174 LCE5AQ5TCM9 118 aa5.83□□□□□ -1.48
CCDC130-212ENST00000593174 KRTAP20-1Q3LI63 56 aa5.8□□□□□ -1.48
CCDC130-212ENST00000593174 KRTAP4-7Q9BYR0 210 aa5.8□□□□□ -1.48
CCDC130-212ENST00000593174 MT1MQ8N339 61 aa5.8□□□□□ -1.48
CCDC130-212ENST00000593174 KRTAP4-3Q9BYR4 195 aa5.7□□□□□ -1.5
CCDC130-212ENST00000593174 KRTAP9-6A8MVA2 160 aa5.69□□□□□ -1.5
CCDC130-212ENST00000593174 SPRR2DP22532 72 aa5.67□□□□□ -1.5
CCDC130-212ENST00000593174 KRTAP2-3P0C7H8 128 aa5.64□□□□□ -1.51
CCDC130-212ENST00000593174 KRTAP2-4Q9BYR9 128 aa5.64□□□□□ -1.51
CCDC130-212ENST00000593174 KRTAP2-1Q9BYU5 128 aa5.62□□□□□ -1.51
CCDC130-212ENST00000593174 DSTQ03001 7570 aaKnown RBP5.55□□□□□ -1.52
CCDC130-212ENST00000593174 LCE3BQ5TA77 95 aa5.5□□□□□ -1.53
CCDC130-212ENST00000593174 KRTAP2-2Q9BYT5 123 aa5.47□□□□□ -1.53
CCDC130-212ENST00000593174 LOC100996750A0A140TA64 210 aa5.46□□□□□ -1.54
CCDC130-212ENST00000593174 KRTAP5-5Q701N2 237 aaPredicted RBP5.22□□□□□ -1.57
CCDC130-212ENST00000593174 KRTAP4-9Q9BYQ8 210 aa5.16□□□□□ -1.58
CCDC130-212ENST00000593174 MT1AP04731 61 aa5.1□□□□□ -1.59
CCDC130-212ENST00000593174 KRTAP6-1Q3LI64 71 aa5.06□□□□□ -1.6
CCDC130-212ENST00000593174 KRTAP5-4Q6L8H1 288 aa5.05□□□□□ -1.6
CCDC130-212ENST00000593174 MT4P47944 62 aa5.02□□□□□ -1.61
CCDC130-212ENST00000593174 LCE4AQ5TA78 99 aa5□□□□□ -1.61
CCDC130-212ENST00000593174 LCE1DQ5T752 114 aa4.99□□□□□ -1.61
CCDC130-212ENST00000593174 SYNE1Q8NF91 8797 aaKnown RBP4.97□□□□□ -1.61
CCDC130-212ENST00000593174 GPR98Q8WXG9 6306 aa4.94□□□□□ -1.62
CCDC130-212ENST00000593174 KRTAP12-4P60329 112 aa4.91□□□□□ -1.62
CCDC130-212ENST00000593174 KRTAP9-4Q9BYQ2 154 aa4.86□□□□□ -1.63
CCDC130-212ENST00000593174 HMCN1Q96RW7 5635 aa4.85□□□□□ -1.63
CCDC130-212ENST00000593174 KRTAP4-6Q9BYQ5 205 aa4.85□□□□□ -1.63
CCDC130-212ENST00000593174 KRTAP20-2Q3LI61 65 aa4.74□□□□□ -1.65
CCDC130-212ENST00000593174 KRTAP6-2Q3LI66 62 aa4.69□□□□□ -1.66
CCDC130-212ENST00000593174 LCE3DQ9BYE3 92 aa4.67□□□□□ -1.66
CCDC130-212ENST00000593174 MT3P25713 68 aa4.63□□□□□ -1.67
CCDC130-212ENST00000593174 LCE3EQ5T5B0 92 aa4.63□□□□□ -1.67
CCDC130-212ENST00000593174 AHNAK2Q8IVF2 5795 aa4.62□□□□□ -1.67
CCDC130-212ENST00000593174 KRTAP5-3Q6L8H2 238 aa4.56□□□□□ -1.68
CCDC130-212ENST00000593174 KRTAP5-2Q701N4 177 aa4.56□□□□□ -1.68
CCDC130-212ENST00000593174 KRTAP5-10Q6L8G5 202 aa4.51□□□□□ -1.69
CCDC130-212ENST00000593174 KRTAP5-7Q6L8G8 165 aa4.34□□□□□ -1.71
CCDC130-212ENST00000593174 PRM1P04553 51 aa4.3□□□□□ -1.72
CCDC130-212ENST00000593174 OBSCNQ5VST9 7968 aa4.27□□□□□ -1.73
CCDC130-212ENST00000593174 KRTAP4-11Q9BYQ6 195 aa4.17□□□□□ -1.74
CCDC130-212ENST00000593174 LCE1EQ5T753 118 aa4.04□□□□□ -1.76
CCDC130-212ENST00000593174 KRTAP5-8O75690 187 aa4.03□□□□□ -1.76
CCDC130-212ENST00000593174 KRTAP5-1Q6L8H4 278 aa3.96□□□□□ -1.78
CCDC130-212ENST00000593174 MUC5ACP98088 5654 aa3.92□□□□□ -1.78
CCDC130-212ENST00000593174 LCE1BQ5T7P3 118 aa3.82□□□□□ -1.8
CCDC130-212ENST00000593174 AHNAKQ09666 5890 aaKnown RBP3.82□□□□□ -1.8
CCDC130-212ENST00000593174 MUC5BQ9HC84 5762 aaPredicted RBP3.81□□□□□ -1.8
CCDC130-212ENST00000593174 KRTAP9-9Q9BYP9 154 aa3.81□□□□□ -1.8
CCDC130-212ENST00000593174 KRTAP4-2Q9BYR5 136 aa3.77□□□□□ -1.81
CCDC130-212ENST00000593174 LCE1CQ5T751 118 aa3.76□□□□□ -1.81
CCDC130-212ENST00000593174 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.5□□□□□ -1.85
CCDC130-212ENST00000593174 KRTAP5-11Q6L8G4 156 aa3.33□□□□□ -1.88
CCDC130-212ENST00000593174 KRTAP21-2Q3LI59 83 aa3.3□□□□□ -1.88
CCDC130-212ENST00000593174 KRTAP4-12Q9BQ66 201 aa3.27□□□□□ -1.89
CCDC130-212ENST00000593174 LCE1FQ5T754 118 aa3.04□□□□□ -1.92
CCDC130-212ENST00000593174 KRTAP4-4Q9BYR3 166 aa2.98□□□□□ -1.93
CCDC130-212ENST00000593174 PHGR1C9JFL3 82 aa2.87□□□□□ -1.95
CCDC130-212ENST00000593174 KRTAP21-1Q3LI58 79 aa2.76□□□□□ -1.97
CCDC130-212ENST00000593174 MUC19Q7Z5P9 8384 aa2.56□□□□□ -2
CCDC130-212ENST00000593174 MUC16Q8WXI7 14507 aa1.87□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 143 ms