RNA–Protein interactions for RNA: ENST00000592909.1

SMCO4P1-201, Transcript of single-pass membrane protein with coiled-coil domains 4 pseudogene 1, humanhuman

BASIC

Gene SMCO4P1, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4P1-201ENST00000592909 TMEM258P61165 79 aa3.37□□□□□ -1.87
SMCO4P1-201ENST00000592909 C10orf95Q9H7T3 257 aa3.35□□□□□ -1.87
SMCO4P1-201ENST00000592909 KRTAP4-7Q9BYR0 210 aa3.34□□□□□ -1.87
SMCO4P1-201ENST00000592909 KRTAP4-11Q9BYQ6 195 aa3.33□□□□□ -1.88
SMCO4P1-201ENST00000592909 AHNAKQ09666 5890 aaKnown RBP3.32□□□□□ -1.88
SMCO4P1-201ENST00000592909 LCE3AQ5TA76 89 aa3.3□□□□□ -1.88
SMCO4P1-201ENST00000592909 MUC5ACP98088 5654 aa3.28□□□□□ -1.89
SMCO4P1-201ENST00000592909 SPINT4Q6UDR6 99 aa3.27□□□□□ -1.89
SMCO4P1-201ENST00000592909 MUC5BQ9HC84 5762 aaPredicted RBP3.25□□□□□ -1.89
SMCO4P1-201ENST00000592909 PCP4P48539 62 aa3.25□□□□□ -1.89
SMCO4P1-201ENST00000592909 SEC61GP60059 68 aa3.25□□□□□ -1.89
SMCO4P1-201ENST00000592909 SERP1Q9Y6X1 66 aa3.25□□□□□ -1.89
SMCO4P1-201ENST00000592909 KRTAP5-8O75690 187 aa3.23□□□□□ -1.89
SMCO4P1-201ENST00000592909 KRTAP12-1P59990 96 aa3.23□□□□□ -1.89
SMCO4P1-201ENST00000592909 LINC01558Q9Y6Z2 57 aa3.23□□□□□ -1.89
SMCO4P1-201ENST00000592909 A0A1B0GU33 70 aa3.22□□□□□ -1.89
SMCO4P1-201ENST00000592909 A0A1B0GU69 56 aa3.22□□□□□ -1.89
SMCO4P1-201ENST00000592909 SPATA8Q6RVD6 105 aa3.21□□□□□ -1.9
SMCO4P1-201ENST00000592909 LOC100996750A0A140TA64 210 aa3.19□□□□□ -1.9
SMCO4P1-201ENST00000592909 TNP1P09430 55 aa3.19□□□□□ -1.9
SMCO4P1-201ENST00000592909 KRTAP5-2Q701N4 177 aa3.19□□□□□ -1.9
SMCO4P1-201ENST00000592909 KRTAP12-3P60328 96 aa3.18□□□□□ -1.9
SMCO4P1-201ENST00000592909 RPS28P62857 69 aaKnown RBP3.17□□□□□ -1.9
SMCO4P1-201ENST00000592909 PRR15LQ9BU68 103 aa3.17□□□□□ -1.9
SMCO4P1-201ENST00000592909 Q1T7F1 81 aa3.15□□□□□ -1.91
SMCO4P1-201ENST00000592909 SMIM26A0A096LP01 95 aa3.13□□□□□ -1.91
SMCO4P1-201ENST00000592909 V9GYY9 64 aa3.13□□□□□ -1.91
SMCO4P1-201ENST00000592909 KRTAP9-9Q9BYP9 154 aa3.12□□□□□ -1.91
SMCO4P1-201ENST00000592909 OBSCNQ5VST9 7968 aa3.11□□□□□ -1.91
SMCO4P1-201ENST00000592909 A8MU10 97 aa3.09□□□□□ -1.91
SMCO4P1-201ENST00000592909 UQCR11O14957 56 aa3.09□□□□□ -1.91
SMCO4P1-201ENST00000592909 PSPHP1O15172 72 aa3.04□□□□□ -1.92
SMCO4P1-201ENST00000592909 MIR22HGQ0VDD5 57 aa3.03□□□□□ -1.92
SMCO4P1-201ENST00000592909 MT1AP04731 61 aa3.02□□□□□ -1.93
SMCO4P1-201ENST00000592909 KRTAP6-1Q3LI64 71 aa3.02□□□□□ -1.93
SMCO4P1-201ENST00000592909 KRTAP19-4Q3LI73 84 aa3.02□□□□□ -1.93
SMCO4P1-201ENST00000592909 KRTAP9-4Q9BYQ2 154 aa2.97□□□□□ -1.93
SMCO4P1-201ENST00000592909 KRTAP6-2Q3LI66 62 aa2.96□□□□□ -1.94
SMCO4P1-201ENST00000592909 A6NED7 52 aa2.95□□□□□ -1.94
SMCO4P1-201ENST00000592909 KRTAP5-1Q6L8H4 278 aa2.93□□□□□ -1.94
SMCO4P1-201ENST00000592909 CDC42SE1Q9NRR8 79 aa2.91□□□□□ -1.94
SMCO4P1-201ENST00000592909 K7ERS5 55 aa2.9□□□□□ -1.95
SMCO4P1-201ENST00000592909 LCE3CQ5T5A8 94 aa2.89□□□□□ -1.95
SMCO4P1-201ENST00000592909 KRTAP25-1Q3LHN0 102 aa2.88□□□□□ -1.95
SMCO4P1-201ENST00000592909 KRTAP15-1Q3LI76 137 aa2.84□□□□□ -1.95
SMCO4P1-201ENST00000592909 KRTAP23-1A1A580 65 aa2.81□□□□□ -1.96
SMCO4P1-201ENST00000592909 MT3P25713 68 aa2.79□□□□□ -1.96
SMCO4P1-201ENST00000592909 ROMO1P60602 79 aa2.78□□□□□ -1.96
SMCO4P1-201ENST00000592909 KRTAP9-6A8MVA2 160 aa2.74□□□□□ -1.97
SMCO4P1-201ENST00000592909 BRK1Q8WUW1 75 aa2.72□□□□□ -1.97
SMCO4P1-201ENST00000592909 LCE1EQ5T753 118 aa2.67□□□□□ -1.98
SMCO4P1-201ENST00000592909 PMAIP1Q13794 54 aa2.58□□□□□ -2
SMCO4P1-201ENST00000592909 PRO0628Q9UI54 55 aa2.57□□□□□ -2
SMCO4P1-201ENST00000592909 KRTAP4-2Q9BYR5 136 aa2.55□□□□□ -2
SMCO4P1-201ENST00000592909 LCE1BQ5T7P3 118 aa2.51□□□□□ -2.01
SMCO4P1-201ENST00000592909 LCE1CQ5T751 118 aa2.48□□□□□ -2.01
SMCO4P1-201ENST00000592909 KRTAP4-12Q9BQ66 201 aa2.44□□□□□ -2.02
SMCO4P1-201ENST00000592909 PRAC1Q96KF2 57 aa2.43□□□□□ -2.02
SMCO4P1-201ENST00000592909 KTN1-AS1Q86SY8 53 aa2.41□□□□□ -2.02
SMCO4P1-201ENST00000592909 KRTAP5-11Q6L8G4 156 aa2.35□□□□□ -2.03
SMCO4P1-201ENST00000592909 LCE1FQ5T754 118 aa2.32□□□□□ -2.04
SMCO4P1-201ENST00000592909 PHGR1C9JFL3 82 aa2.27□□□□□ -2.05
SMCO4P1-201ENST00000592909 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.21□□□□□ -2.06
SMCO4P1-201ENST00000592909 SVIPQ8NHG7 77 aa2.2□□□□□ -2.06
SMCO4P1-201ENST00000592909 KRTAP21-2Q3LI59 83 aa2.01□□□□□ -2.09
SMCO4P1-201ENST00000592909 LUZP6Q538Z0 58 aa2.01□□□□□ -2.09
SMCO4P1-201ENST00000592909 LCE3DQ9BYE3 92 aa2□□□□□ -2.09
SMCO4P1-201ENST00000592909 MUC19Q7Z5P9 8384 aa1.95□□□□□ -2.1
SMCO4P1-201ENST00000592909 KRTAP4-4Q9BYR3 166 aa1.87□□□□□ -2.11
SMCO4P1-201ENST00000592909 LCE3EQ5T5B0 92 aa1.81□□□□□ -2.12
SMCO4P1-201ENST00000592909 NDUFAF8A1L188 74 aa1.78□□□□□ -2.12
SMCO4P1-201ENST00000592909 KRTAP21-1Q3LI58 79 aa1.75□□□□□ -2.13
SMCO4P1-201ENST00000592909 H3BS24 57 aa1.51□□□□□ -2.17
SMCO4P1-201ENST00000592909 INE1O15225 51 aa1.5□□□□□ -2.17
SMCO4P1-201ENST00000592909 A0A0A0MQY5 61 aa1.48□□□□□ -2.17
SMCO4P1-201ENST00000592909 PRM1P04553 51 aa1.42□□□□□ -2.18
SMCO4P1-201ENST00000592909 MUC16Q8WXI7 14507 aa1.36□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 124.1 ms